EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSGMOG00000014774 (Gene tree)
Gene ID: -
Gene Symbol: rad54b
Alias: im:7137737|im:7153525
Full Name: RAD54 homolog B
Gene Type: protein_coding
Species: Gadus_morhua
Status: putative
Strand: Minus strand
Length: 10274 bases
Position: chrGeneScaffold_4378:443248-453521
Accession: ZDB-GENE-060810-50
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSGMOP00000015832	ResIII	PF04851.15	3.5e-10	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSGMOT00000016236	-	2412	-	ENSGMOP00000015832	803 (aa)	-	UPI00023F3197

Gene Model

Click here to download ENSGMOG00000014774's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSGMOG00000014774's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSGMOG00000014774	rad54b	75	44.872	ENSGMOG00000014568	rad54l	83	44.302
ENSGMOG00000014774	rad54b	62	32.246	ENSGMOG00000007751	ercc6l2	53	32.110
ENSGMOG00000014774	rad54b	57	32.000	ENSGMOG00000018995	smarcad1a	57	31.619

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSGMOG00000014774	rad54b	98	55.764	ENSG00000197275	RAD54B	86	55.764	Homo_sapiens
ENSGMOG00000014774	rad54b	91	55.210	ENSG00000265817	FSBP	99	55.210	Homo_sapiens
ENSGMOG00000014774	rad54b	98	56.875	ENSAMEG00000005834	-	86	56.875	Ailuropoda_melanoleuca
ENSGMOG00000014774	rad54b	100	80.224	ENSACIG00000013005	rad54b	91	80.224	Amphilophus_citrinellus
ENSGMOG00000014774	rad54b	99	82.093	ENSAOCG00000008523	rad54b	85	82.219	Amphiprion_ocellaris
ENSGMOG00000014774	rad54b	99	78.030	ENSAPEG00000001673	rad54b	89	78.409	Amphiprion_percula
ENSGMOG00000014774	rad54b	99	82.702	ENSATEG00000001527	rad54b	90	82.449	Anabas_testudineus
ENSGMOG00000014774	rad54b	98	60.327	ENSAPLG00000014366	-	85	60.327	Anas_platyrhynchos
ENSGMOG00000014774	rad54b	98	59.062	ENSACAG00000003671	-	97	59.062	Anolis_carolinensis
ENSGMOG00000014774	rad54b	81	57.187	ENSANAG00000019528	-	99	57.187	Aotus_nancymaae
ENSGMOG00000014774	rad54b	99	81.818	ENSACLG00000007826	rad54b	91	81.818	Astatotilapia_calliptera
ENSGMOG00000014774	rad54b	99	65.915	ENSAMXG00000039985	rad54b	95	65.714	Astyanax_mexicanus
ENSGMOG00000014774	rad54b	98	56.875	ENSBTAG00000000632	RAD54B	86	56.875	Bos_taurus
ENSGMOG00000014774	rad54b	88	35.034	WBGene00013792	Y116A8C.13	93	32.458	Caenorhabditis_elegans
ENSGMOG00000014774	rad54b	98	56.713	ENSCJAG00000000080	-	99	55.556	Callithrix_jacchus
ENSGMOG00000014774	rad54b	98	57.285	ENSCAFG00000009179	RAD54B	86	57.285	Canis_familiaris
ENSGMOG00000014774	rad54b	98	57.285	ENSCAFG00020012084	-	86	57.285	Canis_lupus_dingo
ENSGMOG00000014774	rad54b	98	56.821	ENSCHIG00000008230	-	86	56.821	Capra_hircus
ENSGMOG00000014774	rad54b	98	56.770	ENSTSYG00000013234	-	86	56.770	Carlito_syrichta
ENSGMOG00000014774	rad54b	99	56.522	ENSCPOG00000011643	-	88	56.522	Cavia_porcellus
ENSGMOG00000014774	rad54b	98	56.855	ENSCCAG00000011754	-	99	55.707	Cebus_capucinus
ENSGMOG00000014774	rad54b	98	56.156	ENSCATG00000030661	-	99	55.631	Cercocebus_atys
ENSGMOG00000014774	rad54b	99	56.398	ENSCLAG00000010476	-	89	56.398	Chinchilla_lanigera
ENSGMOG00000014774	rad54b	98	56.407	ENSCSAG00000012712	-	86	56.407	Chlorocebus_sabaeus
ENSGMOG00000014774	rad54b	98	60.728	ENSCPBG00000003204	-	83	63.534	Chrysemys_picta_bellii
ENSGMOG00000014774	rad54b	98	56.281	ENSCANG00000017939	-	99	55.631	Colobus_angolensis_palliatus
ENSGMOG00000014774	rad54b	99	56.119	ENSCGRG00001020184	Rad54b	89	56.119	Cricetulus_griseus_chok1gshd
ENSGMOG00000014774	rad54b	99	55.130	ENSCGRG00000016752	Rad54b	89	55.130	Cricetulus_griseus_crigri
ENSGMOG00000014774	rad54b	98	78.914	ENSCSEG00000001601	rad54b	93	78.914	Cynoglossus_semilaevis
ENSGMOG00000014774	rad54b	99	78.491	ENSCVAG00000009200	rad54b	89	78.491	Cyprinodon_variegatus
ENSGMOG00000014774	rad54b	99	66.291	ENSDARG00000092134	rad54b	99	68.062	Danio_rerio
ENSGMOG00000014774	rad54b	98	57.251	ENSDNOG00000015535	-	86	57.251	Dasypus_novemcinctus
ENSGMOG00000014774	rad54b	98	57.196	ENSDORG00000002492	Rad54b	89	57.196	Dipodomys_ordii
ENSGMOG00000014774	rad54b	83	60.863	ENSETEG00000010605	-	85	60.863	Echinops_telfairi
ENSGMOG00000014774	rad54b	98	49.627	ENSEBUG00000009104	rad54b	83	49.627	Eptatretus_burgeri
ENSGMOG00000014774	rad54b	98	56.085	ENSEASG00005004021	-	89	56.085	Equus_asinus_asinus
ENSGMOG00000014774	rad54b	98	56.336	ENSECAG00000021949	-	92	56.336	Equus_caballus
ENSGMOG00000014774	rad54b	82	47.012	ENSEEUG00000008056	-	72	47.012	Erinaceus_europaeus
ENSGMOG00000014774	rad54b	99	77.118	ENSELUG00000009287	rad54b	84	77.118	Esox_lucius
ENSGMOG00000014774	rad54b	98	56.713	ENSFCAG00000015513	-	99	56.233	Felis_catus
ENSGMOG00000014774	rad54b	98	60.451	ENSFALG00000005467	-	85	60.451	Ficedula_albicollis
ENSGMOG00000014774	rad54b	99	56.398	ENSFDAG00000020541	-	87	56.398	Fukomys_damarensis
ENSGMOG00000014774	rad54b	99	76.604	ENSFHEG00000014382	rad54b	87	76.604	Fundulus_heteroclitus
ENSGMOG00000014774	rad54b	98	60.606	ENSGALG00000043597	RAD54B	85	60.606	Gallus_gallus
ENSGMOG00000014774	rad54b	98	79.848	ENSGAFG00000007901	rad54b	91	79.087	Gambusia_affinis
ENSGMOG00000014774	rad54b	98	81.669	ENSGACG00000009128	rad54b	86	81.669	Gasterosteus_aculeatus
ENSGMOG00000014774	rad54b	98	60.804	ENSGAGG00000018747	-	85	60.804	Gopherus_agassizii
ENSGMOG00000014774	rad54b	98	55.583	ENSGGOG00000023516	-	86	55.583	Gorilla_gorilla
ENSGMOG00000014774	rad54b	98	81.772	ENSHBUG00000016017	rad54b	84	81.566	Haplochromis_burtoni
ENSGMOG00000014774	rad54b	99	56.104	ENSHGLG00000008263	RAD54B	86	56.104	Heterocephalus_glaber_female
ENSGMOG00000014774	rad54b	99	55.324	ENSHGLG00100008108	-	86	55.324	Heterocephalus_glaber_male
ENSGMOG00000014774	rad54b	98	76.933	ENSHCOG00000004764	rad54b	97	74.074	Hippocampus_comes
ENSGMOG00000014774	rad54b	99	65.309	ENSIPUG00000018531	rad54b	84	65.672	Ictalurus_punctatus
ENSGMOG00000014774	rad54b	98	55.626	ENSSTOG00000010791	-	85	55.626	Ictidomys_tridecemlineatus
ENSGMOG00000014774	rad54b	98	57.054	ENSJJAG00000010314	Rad54b	86	57.054	Jaculus_jaculus
ENSGMOG00000014774	rad54b	98	77.497	ENSKMAG00000004744	rad54b	91	77.497	Kryptolebias_marmoratus
ENSGMOG00000014774	rad54b	93	62.187	ENSLACG00000000859	-	100	62.187	Latimeria_chalumnae
ENSGMOG00000014774	rad54b	98	66.330	ENSLOCG00000010100	rad54b	93	66.208	Lepisosteus_oculatus
ENSGMOG00000014774	rad54b	98	54.557	ENSLAFG00000015315	-	97	54.557	Loxodonta_africana
ENSGMOG00000014774	rad54b	98	56.156	ENSMFAG00000031629	-	99	55.631	Macaca_fascicularis
ENSGMOG00000014774	rad54b	98	56.156	ENSMMUG00000005659	-	86	56.156	Macaca_mulatta
ENSGMOG00000014774	rad54b	98	56.030	ENSMNEG00000016408	-	86	56.030	Macaca_nemestrina
ENSGMOG00000014774	rad54b	98	56.156	ENSMLEG00000006946	-	86	56.156	Mandrillus_leucophaeus
ENSGMOG00000014774	rad54b	99	78.849	ENSMAMG00000012269	rad54b	89	78.849	Mastacembelus_armatus
ENSGMOG00000014774	rad54b	99	81.944	ENSMZEG00005005281	rad54b	95	81.944	Maylandia_zebra
ENSGMOG00000014774	rad54b	98	60.354	ENSMGAG00000012024	-	85	60.354	Meleagris_gallopavo
ENSGMOG00000014774	rad54b	98	56.281	ENSMAUG00000013586	Rad54b	89	56.281	Mesocricetus_auratus
ENSGMOG00000014774	rad54b	98	56.821	ENSMICG00000000754	-	90	56.821	Microcebus_murinus
ENSGMOG00000014774	rad54b	98	55.695	ENSMOCG00000020035	Rad54b	88	55.945	Microtus_ochrogaster
ENSGMOG00000014774	rad54b	98	81.392	ENSMMOG00000003394	rad54b	89	81.392	Mola_mola
ENSGMOG00000014774	rad54b	99	56.625	ENSMODG00000007343	-	97	56.625	Monodelphis_domestica
ENSGMOG00000014774	rad54b	81	80.526	ENSMALG00000001520	rad54b	100	80.526	Monopterus_albus
ENSGMOG00000014774	rad54b	98	57.161	MGP_CAROLIEiJ_G0025810	Rad54b	88	57.161	Mus_caroli
ENSGMOG00000014774	rad54b	98	56.281	ENSMUSG00000078773	Rad54b	88	56.281	Mus_musculus
ENSGMOG00000014774	rad54b	98	56.533	MGP_PahariEiJ_G0023933	Rad54b	88	56.533	Mus_pahari
ENSGMOG00000014774	rad54b	98	56.679	MGP_SPRETEiJ_G0026758	Rad54b	88	56.679	Mus_spretus
ENSGMOG00000014774	rad54b	98	56.767	ENSMPUG00000008878	-	97	56.767	Mustela_putorius_furo
ENSGMOG00000014774	rad54b	98	56.910	ENSMLUG00000008953	-	85	57.197	Myotis_lucifugus
ENSGMOG00000014774	rad54b	98	56.195	ENSNGAG00000017537	Rad54b	87	56.195	Nannospalax_galili
ENSGMOG00000014774	rad54b	99	81.692	ENSNBRG00000013394	rad54b	91	81.692	Neolamprologus_brichardi
ENSGMOG00000014774	rad54b	98	55.332	ENSNLEG00000003062	-	99	54.743	Nomascus_leucogenys
ENSGMOG00000014774	rad54b	79	60.052	ENSMEUG00000012426	-	69	60.052	Notamacropus_eugenii
ENSGMOG00000014774	rad54b	99	57.463	ENSODEG00000019564	-	87	57.338	Octodon_degus
ENSGMOG00000014774	rad54b	94	73.171	ENSODEG00000002650	-	92	72.093	Octodon_degus
ENSGMOG00000014774	rad54b	99	81.944	ENSONIG00000006067	rad54b	86	81.944	Oreochromis_niloticus
ENSGMOG00000014774	rad54b	94	58.931	ENSOANG00000011348	-	99	58.931	Ornithorhynchus_anatinus
ENSGMOG00000014774	rad54b	98	57.538	ENSOCUG00000016478	-	86	57.538	Oryctolagus_cuniculus
ENSGMOG00000014774	rad54b	99	79.167	ENSORLG00000008918	rad54b	100	81.356	Oryzias_latipes
ENSGMOG00000014774	rad54b	81	81.202	ENSORLG00020012171	rad54b	100	81.202	Oryzias_latipes_hni
ENSGMOG00000014774	rad54b	99	78.788	ENSORLG00015018536	rad54b	84	78.788	Oryzias_latipes_hsok
ENSGMOG00000014774	rad54b	97	79.408	ENSOMEG00000004345	rad54b	100	79.408	Oryzias_melastigma
ENSGMOG00000014774	rad54b	98	54.759	ENSOGAG00000007854	-	86	54.568	Otolemur_garnettii
ENSGMOG00000014774	rad54b	98	56.484	ENSOARG00000007691	-	97	56.484	Ovis_aries
ENSGMOG00000014774	rad54b	98	54.637	ENSPPAG00000029572	-	86	54.637	Pan_paniscus
ENSGMOG00000014774	rad54b	98	56.713	ENSPPRG00000007571	-	99	56.233	Panthera_pardus
ENSGMOG00000014774	rad54b	91	56.233	ENSPTIG00000012670	-	99	56.233	Panthera_tigris_altaica
ENSGMOG00000014774	rad54b	98	55.890	ENSPTRG00000020427	-	99	55.345	Pan_troglodytes
ENSGMOG00000014774	rad54b	98	56.156	ENSPANG00000019566	-	86	56.156	Papio_anubis
ENSGMOG00000014774	rad54b	99	67.830	ENSPKIG00000014974	rad54b	86	67.830	Paramormyrops_kingsleyae
ENSGMOG00000014774	rad54b	98	59.273	ENSPSIG00000002383	-	95	59.273	Pelodiscus_sinensis
ENSGMOG00000014774	rad54b	98	56.571	ENSPEMG00000012133	Rad54b	88	56.571	Peromyscus_maniculatus_bairdii
ENSGMOG00000014774	rad54b	98	57.503	ENSPMAG00000002916	rad54b	98	57.503	Petromyzon_marinus
ENSGMOG00000014774	rad54b	98	57.196	ENSPCIG00000020151	-	92	56.892	Phascolarctos_cinereus
ENSGMOG00000014774	rad54b	98	79.721	ENSPFOG00000023411	rad54b	84	79.721	Poecilia_formosa
ENSGMOG00000014774	rad54b	98	79.594	ENSPLAG00000010430	rad54b	84	79.594	Poecilia_latipinna
ENSGMOG00000014774	rad54b	98	79.721	ENSPMEG00000016873	rad54b	92	76.933	Poecilia_mexicana
ENSGMOG00000014774	rad54b	98	79.848	ENSPREG00000018443	rad54b	90	79.214	Poecilia_reticulata
ENSGMOG00000014774	rad54b	98	55.583	ENSPPYG00000018750	-	86	55.583	Pongo_abelii
ENSGMOG00000014774	rad54b	98	57.268	ENSPCOG00000026845	-	99	56.428	Propithecus_coquereli
ENSGMOG00000014774	rad54b	93	55.159	ENSPVAG00000000261	-	86	55.159	Pteropus_vampyrus
ENSGMOG00000014774	rad54b	98	79.747	ENSPNYG00000018303	rad54b	96	79.747	Pundamilia_nyererei
ENSGMOG00000014774	rad54b	98	67.168	ENSPNAG00000000295	rad54b	92	65.918	Pygocentrus_nattereri
ENSGMOG00000014774	rad54b	98	56.946	ENSRNOG00000039949	Rad54b	88	56.946	Rattus_norvegicus
ENSGMOG00000014774	rad54b	98	56.030	ENSRBIG00000020419	-	86	56.030	Rhinopithecus_bieti
ENSGMOG00000014774	rad54b	98	55.905	ENSRROG00000039897	-	86	55.905	Rhinopithecus_roxellana
ENSGMOG00000014774	rad54b	88	37.909	YBR073W	RDH54	78	38.481	Saccharomyces_cerevisiae
ENSGMOG00000014774	rad54b	98	56.587	ENSSBOG00000028501	-	86	56.587	Saimiri_boliviensis_boliviensis
ENSGMOG00000014774	rad54b	98	58.396	ENSSHAG00000017038	-	86	58.396	Sarcophilus_harrisii
ENSGMOG00000014774	rad54b	71	69.542	ENSSFOG00015008483	rad54b	89	69.542	Scleropages_formosus
ENSGMOG00000014774	rad54b	98	81.139	ENSSMAG00000018659	rad54b	91	79.293	Scophthalmus_maximus
ENSGMOG00000014774	rad54b	95	82.399	ENSSDUG00000001122	rad54b	80	82.399	Seriola_dumerili
ENSGMOG00000014774	rad54b	99	82.955	ENSSLDG00000013787	rad54b	91	78.030	Seriola_lalandi_dorsalis
ENSGMOG00000014774	rad54b	98	60.100	ENSSPUG00000016497	-	88	60.100	Sphenodon_punctatus
ENSGMOG00000014774	rad54b	99	82.197	ENSSPAG00000012800	rad54b	89	82.197	Stegastes_partitus
ENSGMOG00000014774	rad54b	98	56.604	ENSSSCG00000006101	-	98	56.604	Sus_scrofa
ENSGMOG00000014774	rad54b	98	60.576	ENSTGUG00000011880	-	85	60.576	Taeniopygia_guttata
ENSGMOG00000014774	rad54b	99	78.715	ENSTRUG00000010015	rad54b	83	78.715	Takifugu_rubripes
ENSGMOG00000014774	rad54b	98	52.823	ENSTTRG00000006312	-	86	52.823	Tursiops_truncatus
ENSGMOG00000014774	rad54b	98	56.663	ENSUMAG00000016401	-	86	56.663	Ursus_maritimus
ENSGMOG00000014774	rad54b	98	56.964	ENSVPAG00000003157	-	86	56.964	Vicugna_pacos
ENSGMOG00000014774	rad54b	98	50.758	ENSXETG00000025924	rad54b	97	50.758	Xenopus_tropicalis
ENSGMOG00000014774	rad54b	98	79.214	ENSXMAG00000013141	rad54b	91	79.214	Xiphophorus_maculatus