EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSGMOG00000014802 (Gene tree)
Gene ID: -
Gene Symbol: rbm47
Alias: si:ch211-241e15.2|wu:fj94a03
Full Name: RNA binding motif protein 47
Gene Type: protein_coding
Species: Gadus_morhua
Status: putative
Strand: Plus strand
Length: 6834 bases
Position: chrGeneScaffold_4152:21160-27993
Accession: ZDB-GENE-030131-9612
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSGMOP00000015847	RRM_1	PF00076.22	3.9e-34	1	3
ENSGMOP00000015847	RRM_1	PF00076.22	3.9e-34	2	3
ENSGMOP00000015847	RRM_1	PF00076.22	3.9e-34	3	3

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSGMOT00000016251	-	1833	-	ENSGMOP00000015847	610 (aa)	-	UPI00023F324A

Gene Model

Click here to download ENSGMOG00000014802's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSGMOG00000014802's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSGMOG00000014802	rbm47	50	66.774	ENSGMOG00000018943	a1cf	51	66.774

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSGMOG00000014802	rbm47	94	84.358	ENSG00000163694	RBM47	100	81.780	Homo_sapiens
ENSGMOG00000014802	rbm47	100	88.131	ENSAPOG00000011062	rbm47	100	88.579	Acanthochromis_polyacanthus
ENSGMOG00000014802	rbm47	94	75.475	ENSAMEG00000009672	RBM47	100	73.948	Ailuropoda_melanoleuca
ENSGMOG00000014802	rbm47	100	81.230	ENSACIG00000011531	rbm47	100	82.039	Amphilophus_citrinellus
ENSGMOG00000014802	rbm47	100	88.579	ENSAOCG00000022245	rbm47	100	88.579	Amphiprion_ocellaris
ENSGMOG00000014802	rbm47	100	88.579	ENSAPEG00000018304	rbm47	100	88.579	Amphiprion_percula
ENSGMOG00000014802	rbm47	100	84.142	ENSATEG00000018400	rbm47	100	84.142	Anabas_testudineus
ENSGMOG00000014802	rbm47	100	73.539	ENSAPLG00000013974	RBM47	100	73.539	Anas_platyrhynchos
ENSGMOG00000014802	rbm47	100	73.021	ENSACAG00000011833	RBM47	100	73.021	Anolis_carolinensis
ENSGMOG00000014802	rbm47	100	79.345	ENSANAG00000029440	RBM47	100	80.759	Aotus_nancymaae
ENSGMOG00000014802	rbm47	100	87.310	ENSACLG00000016902	rbm47	100	87.310	Astatotilapia_calliptera
ENSGMOG00000014802	rbm47	100	78.514	ENSAMXG00000021794	rbm47	100	79.968	Astyanax_mexicanus
ENSGMOG00000014802	rbm47	100	74.146	ENSBTAG00000002356	RBM47	100	74.634	Bos_taurus
ENSGMOG00000014802	rbm47	94	84.078	ENSCJAG00000019385	RBM47	100	80.759	Callithrix_jacchus
ENSGMOG00000014802	rbm47	93	76.132	ENSCAFG00000015898	RBM47	100	74.146	Canis_familiaris
ENSGMOG00000014802	rbm47	80	78.138	ENSCAFG00020010558	RBM47	94	79.747	Canis_lupus_dingo
ENSGMOG00000014802	rbm47	100	74.146	ENSCHIG00000026214	RBM47	100	74.634	Capra_hircus
ENSGMOG00000014802	rbm47	83	85.202	ENSTSYG00000033612	RBM47	92	85.202	Carlito_syrichta
ENSGMOG00000014802	rbm47	100	68.943	ENSCAPG00000008426	RBM47	100	73.096	Cavia_aperea
ENSGMOG00000014802	rbm47	100	73.377	ENSCPOG00000014100	RBM47	100	81.013	Cavia_porcellus
ENSGMOG00000014802	rbm47	99	53.160	ENSCCAG00000024397	-	99	53.160	Cebus_capucinus
ENSGMOG00000014802	rbm47	100	81.108	ENSCCAG00000030129	-	100	81.519	Cebus_capucinus
ENSGMOG00000014802	rbm47	94	84.358	ENSCATG00000042064	RBM47	100	81.013	Cercocebus_atys
ENSGMOG00000014802	rbm47	94	84.637	ENSCLAG00000001684	RBM47	100	80.506	Chinchilla_lanigera
ENSGMOG00000014802	rbm47	94	76.256	ENSCSAG00000017060	RBM47	100	74.351	Chlorocebus_sabaeus
ENSGMOG00000014802	rbm47	82	75.765	ENSCHOG00000011731	RBM47	88	73.707	Choloepus_hoffmanni
ENSGMOG00000014802	rbm47	100	75.000	ENSCPBG00000013831	RBM47	100	75.000	Chrysemys_picta_bellii
ENSGMOG00000014802	rbm47	94	84.358	ENSCANG00000019997	RBM47	100	81.013	Colobus_angolensis_palliatus
ENSGMOG00000014802	rbm47	100	72.123	ENSCGRG00001000623	-	100	79.241	Cricetulus_griseus_chok1gshd
ENSGMOG00000014802	rbm47	89	73.232	ENSCGRG00001020102	-	100	74.747	Cricetulus_griseus_chok1gshd
ENSGMOG00000014802	rbm47	82	78.933	ENSCGRG00000014760	-	96	80.618	Cricetulus_griseus_crigri
ENSGMOG00000014802	rbm47	100	71.313	ENSCGRG00000007762	-	100	74.576	Cricetulus_griseus_crigri
ENSGMOG00000014802	rbm47	93	82.759	ENSCSEG00000004545	rbm47	100	80.484	Cynoglossus_semilaevis
ENSGMOG00000014802	rbm47	100	87.121	ENSCVAG00000020144	rbm47	100	87.563	Cyprinodon_variegatus
ENSGMOG00000014802	rbm47	100	79.450	ENSDARG00000061985	rbm47	100	79.483	Danio_rerio
ENSGMOG00000014802	rbm47	94	75.174	ENSDNOG00000046854	RBM47	100	74.146	Dasypus_novemcinctus
ENSGMOG00000014802	rbm47	100	74.595	ENSDORG00000010144	Rbm47	100	74.595	Dipodomys_ordii
ENSGMOG00000014802	rbm47	94	76.166	ENSETEG00000009194	RBM47	100	73.948	Echinops_telfairi
ENSGMOG00000014802	rbm47	93	57.850	ENSEBUG00000011912	rbm47	96	58.362	Eptatretus_burgeri
ENSGMOG00000014802	rbm47	94	76.562	ENSEASG00005008443	RBM47	100	74.472	Equus_asinus_asinus
ENSGMOG00000014802	rbm47	94	76.562	ENSECAG00000004400	RBM47	100	74.472	Equus_caballus
ENSGMOG00000014802	rbm47	70	88.571	ENSEEUG00000001194	RBM47	75	80.321	Erinaceus_europaeus
ENSGMOG00000014802	rbm47	100	82.315	ENSELUG00000006148	rbm47	100	88.750	Esox_lucius
ENSGMOG00000014802	rbm47	94	76.736	ENSFCAG00000012399	RBM47	100	74.959	Felis_catus
ENSGMOG00000014802	rbm47	100	75.365	ENSFALG00000002861	RBM47	100	75.365	Ficedula_albicollis
ENSGMOG00000014802	rbm47	100	73.420	ENSFDAG00000016326	RBM47	100	78.987	Fukomys_damarensis
ENSGMOG00000014802	rbm47	100	82.362	ENSFHEG00000007938	rbm47	100	82.362	Fundulus_heteroclitus
ENSGMOG00000014802	rbm47	64	82.278	ENSGALG00000014267	RBM47	99	82.278	Gallus_gallus
ENSGMOG00000014802	rbm47	64	84.772	ENSGAFG00000020571	rbm47	98	84.772	Gambusia_affinis
ENSGMOG00000014802	rbm47	100	81.877	ENSGACG00000016223	rbm47	100	86.802	Gasterosteus_aculeatus
ENSGMOG00000014802	rbm47	100	75.000	ENSGAGG00000020051	RBM47	100	75.000	Gopherus_agassizii
ENSGMOG00000014802	rbm47	94	84.358	ENSGGOG00000001367	RBM47	100	81.013	Gorilla_gorilla
ENSGMOG00000014802	rbm47	100	87.310	ENSHBUG00000003520	rbm47	100	87.310	Haplochromis_burtoni
ENSGMOG00000014802	rbm47	85	63.427	ENSHGLG00000016914	RBM47	100	76.836	Heterocephalus_glaber_female
ENSGMOG00000014802	rbm47	100	66.829	ENSHGLG00100003071	-	100	66.667	Heterocephalus_glaber_male
ENSGMOG00000014802	rbm47	100	73.333	ENSHGLG00100014028	-	100	80.000	Heterocephalus_glaber_male
ENSGMOG00000014802	rbm47	99	87.626	ENSHCOG00000002074	rbm47	99	88.071	Hippocampus_comes
ENSGMOG00000014802	rbm47	100	78.964	ENSIPUG00000004743	rbm47	96	85.279	Ictalurus_punctatus
ENSGMOG00000014802	rbm47	94	75.779	ENSSTOG00000004727	RBM47	100	80.759	Ictidomys_tridecemlineatus
ENSGMOG00000014802	rbm47	94	76.430	ENSJJAG00000013823	Rbm47	100	73.701	Jaculus_jaculus
ENSGMOG00000014802	rbm47	100	83.306	ENSKMAG00000000084	rbm47	100	88.325	Kryptolebias_marmoratus
ENSGMOG00000014802	rbm47	100	83.333	ENSLBEG00000008436	rbm47	100	87.056	Labrus_bergylta
ENSGMOG00000014802	rbm47	94	77.069	ENSLACG00000007196	RBM47	100	73.990	Latimeria_chalumnae
ENSGMOG00000014802	rbm47	93	80.796	ENSLOCG00000012966	rbm47	95	77.184	Lepisosteus_oculatus
ENSGMOG00000014802	rbm47	100	73.377	ENSLAFG00000011998	RBM47	100	74.351	Loxodonta_africana
ENSGMOG00000014802	rbm47	94	84.358	ENSMFAG00000037967	RBM47	100	81.013	Macaca_fascicularis
ENSGMOG00000014802	rbm47	94	76.256	ENSMMUG00000012036	RBM47	100	79.717	Macaca_mulatta
ENSGMOG00000014802	rbm47	94	84.078	ENSMNEG00000040774	RBM47	100	80.759	Macaca_nemestrina
ENSGMOG00000014802	rbm47	94	86.780	ENSMLEG00000041432	RBM47	100	82.335	Mandrillus_leucophaeus
ENSGMOG00000014802	rbm47	100	87.817	ENSMAMG00000019143	rbm47	100	87.817	Mastacembelus_armatus
ENSGMOG00000014802	rbm47	100	82.686	ENSMZEG00005023659	rbm47	100	87.310	Maylandia_zebra
ENSGMOG00000014802	rbm47	100	75.161	ENSMGAG00000012226	RBM47	100	75.161	Meleagris_gallopavo
ENSGMOG00000014802	rbm47	100	72.078	ENSMAUG00000006493	Rbm47	100	79.293	Mesocricetus_auratus
ENSGMOG00000014802	rbm47	93	82.303	ENSMICG00000026417	RBM47	100	78.228	Microcebus_murinus
ENSGMOG00000014802	rbm47	100	78.481	ENSMOCG00000021170	Rbm47	100	79.494	Microtus_ochrogaster
ENSGMOG00000014802	rbm47	100	82.848	ENSMMOG00000007260	rbm47	100	82.848	Mola_mola
ENSGMOG00000014802	rbm47	100	76.136	ENSMODG00000007003	RBM47	100	76.136	Monodelphis_domestica
ENSGMOG00000014802	rbm47	50	77.532	ENSMODG00000015426	-	98	77.532	Monodelphis_domestica
ENSGMOG00000014802	rbm47	99	70.279	ENSMODG00000020561	-	99	70.443	Monodelphis_domestica
ENSGMOG00000014802	rbm47	100	87.848	ENSMALG00000005167	rbm47	100	87.848	Monopterus_albus
ENSGMOG00000014802	rbm47	100	78.481	MGP_CAROLIEiJ_G0027258	Rbm47	100	79.494	Mus_caroli
ENSGMOG00000014802	rbm47	100	78.481	ENSMUSG00000070780	Rbm47	100	79.494	Mus_musculus
ENSGMOG00000014802	rbm47	100	78.481	MGP_PahariEiJ_G0017040	Rbm47	100	79.494	Mus_pahari
ENSGMOG00000014802	rbm47	100	78.481	MGP_SPRETEiJ_G0028253	Rbm47	100	79.494	Mus_spretus
ENSGMOG00000014802	rbm47	94	76.042	ENSMPUG00000006177	RBM47	94	74.634	Mustela_putorius_furo
ENSGMOG00000014802	rbm47	100	73.539	ENSMLUG00000000889	RBM47	100	74.026	Myotis_lucifugus
ENSGMOG00000014802	rbm47	100	73.864	ENSNGAG00000003325	Rbm47	100	74.351	Nannospalax_galili
ENSGMOG00000014802	rbm47	100	82.714	ENSNBRG00000015092	rbm47	100	83.522	Neolamprologus_brichardi
ENSGMOG00000014802	rbm47	94	84.358	ENSNLEG00000017151	RBM47	100	81.013	Nomascus_leucogenys
ENSGMOG00000014802	rbm47	69	79.108	ENSMEUG00000009516	-	99	79.108	Notamacropus_eugenii
ENSGMOG00000014802	rbm47	70	84.711	ENSOPRG00000016507	-	75	84.711	Ochotona_princeps
ENSGMOG00000014802	rbm47	94	75.737	ENSODEG00000004873	RBM47	100	74.230	Octodon_degus
ENSGMOG00000014802	rbm47	100	82.848	ENSONIG00000009061	rbm47	100	82.848	Oreochromis_niloticus
ENSGMOG00000014802	rbm47	93	76.990	ENSOANG00000008978	RBM47	100	75.081	Ornithorhynchus_anatinus
ENSGMOG00000014802	rbm47	100	73.984	ENSOCUG00000012034	RBM47	100	74.634	Oryctolagus_cuniculus
ENSGMOG00000014802	rbm47	100	81.715	ENSORLG00000005847	rbm47	100	87.374	Oryzias_latipes
ENSGMOG00000014802	rbm47	100	81.877	ENSORLG00020005154	rbm47	100	87.817	Oryzias_latipes_hni
ENSGMOG00000014802	rbm47	100	82.039	ENSORLG00015000066	rbm47	100	87.817	Oryzias_latipes_hsok
ENSGMOG00000014802	rbm47	100	81.230	ENSOMEG00000010730	rbm47	100	81.230	Oryzias_melastigma
ENSGMOG00000014802	rbm47	94	76.736	ENSOGAG00000029367	-	100	74.634	Otolemur_garnettii
ENSGMOG00000014802	rbm47	94	69.792	ENSOGAG00000025193	-	100	69.106	Otolemur_garnettii
ENSGMOG00000014802	rbm47	100	66.016	ENSOARG00000012711	RBM47	100	66.992	Ovis_aries
ENSGMOG00000014802	rbm47	94	76.256	ENSPPAG00000029763	RBM47	95	81.013	Pan_paniscus
ENSGMOG00000014802	rbm47	94	75.347	ENSPPRG00000012873	RBM47	99	81.266	Panthera_pardus
ENSGMOG00000014802	rbm47	82	73.767	ENSPTIG00000017046	RBM47	100	74.162	Panthera_tigris_altaica
ENSGMOG00000014802	rbm47	94	84.358	ENSPTRG00000016006	RBM47	100	81.013	Pan_troglodytes
ENSGMOG00000014802	rbm47	94	84.358	ENSPANG00000005980	RBM47	100	81.013	Papio_anubis
ENSGMOG00000014802	rbm47	94	77.911	ENSPKIG00000005037	rbm47	100	75.566	Paramormyrops_kingsleyae
ENSGMOG00000014802	rbm47	100	84.131	ENSPKIG00000013431	RBM47	98	84.131	Paramormyrops_kingsleyae
ENSGMOG00000014802	rbm47	90	77.132	ENSPSIG00000017516	RBM47	97	76.951	Pelodiscus_sinensis
ENSGMOG00000014802	rbm47	93	83.737	ENSPMGG00000018540	rbm47	100	81.230	Periophthalmus_magnuspinnatus
ENSGMOG00000014802	rbm47	100	78.481	ENSPEMG00000011088	Rbm47	100	79.494	Peromyscus_maniculatus_bairdii
ENSGMOG00000014802	rbm47	100	82.524	ENSPFOG00000007997	rbm47	100	83.010	Poecilia_formosa
ENSGMOG00000014802	rbm47	100	82.524	ENSPLAG00000002072	rbm47	100	84.772	Poecilia_latipinna
ENSGMOG00000014802	rbm47	100	82.362	ENSPMEG00000017492	rbm47	100	87.310	Poecilia_mexicana
ENSGMOG00000014802	rbm47	100	84.848	ENSPREG00000008456	rbm47	100	87.817	Poecilia_reticulata
ENSGMOG00000014802	rbm47	93	66.895	ENSPPYG00000014688	RBM47	98	67.238	Pongo_abelii
ENSGMOG00000014802	rbm47	81	78.333	ENSPCAG00000011879	RBM47	81	79.524	Procavia_capensis
ENSGMOG00000014802	rbm47	93	75.261	ENSPCOG00000023451	RBM47	100	78.987	Propithecus_coquereli
ENSGMOG00000014802	rbm47	94	76.776	ENSPVAG00000003812	RBM47	100	74.675	Pteropus_vampyrus
ENSGMOG00000014802	rbm47	100	82.287	ENSPNYG00000022868	rbm47	100	83.092	Pundamilia_nyererei
ENSGMOG00000014802	rbm47	100	78.871	ENSPNAG00000007940	rbm47	100	79.321	Pygocentrus_nattereri
ENSGMOG00000014802	rbm47	100	72.520	ENSRNOG00000002408	Rbm47	100	73.659	Rattus_norvegicus
ENSGMOG00000014802	rbm47	94	84.637	ENSRBIG00000039601	RBM47	100	81.266	Rhinopithecus_bieti
ENSGMOG00000014802	rbm47	94	84.637	ENSRROG00000044696	RBM47	100	81.266	Rhinopithecus_roxellana
ENSGMOG00000014802	rbm47	100	70.894	ENSSBOG00000028475	RBM47	96	80.759	Saimiri_boliviensis_boliviensis
ENSGMOG00000014802	rbm47	100	75.285	ENSSHAG00000017576	RBM47	100	75.122	Sarcophilus_harrisii
ENSGMOG00000014802	rbm47	100	74.472	ENSSFOG00015012445	rbm47	100	75.772	Scleropages_formosus
ENSGMOG00000014802	rbm47	98	75.000	ENSSFOG00015024101	RBM47	100	75.493	Scleropages_formosus
ENSGMOG00000014802	rbm47	100	83.333	ENSSMAG00000009744	rbm47	100	87.056	Scophthalmus_maximus
ENSGMOG00000014802	rbm47	100	83.575	ENSSDUG00000022684	rbm47	100	83.575	Seriola_dumerili
ENSGMOG00000014802	rbm47	100	83.226	ENSSLDG00000003109	rbm47	100	87.121	Seriola_lalandi_dorsalis
ENSGMOG00000014802	rbm47	75	76.709	ENSSARG00000001735	RBM47	84	78.205	Sorex_araneus
ENSGMOG00000014802	rbm47	100	79.597	ENSSPUG00000007515	RBM47	100	79.597	Sphenodon_punctatus
ENSGMOG00000014802	rbm47	100	89.594	ENSSPAG00000001257	rbm47	100	89.594	Stegastes_partitus
ENSGMOG00000014802	rbm47	94	76.562	ENSSSCG00000008796	RBM47	100	74.634	Sus_scrofa
ENSGMOG00000014802	rbm47	100	74.230	ENSTGUG00000008705	RBM47	100	74.230	Taeniopygia_guttata
ENSGMOG00000014802	rbm47	94	83.276	ENSTRUG00000014050	rbm47	98	83.276	Takifugu_rubripes
ENSGMOG00000014802	rbm47	100	80.421	ENSTNIG00000006127	rbm47	100	81.230	Tetraodon_nigroviridis
ENSGMOG00000014802	rbm47	71	83.662	ENSTBEG00000001607	RBM47	76	78.934	Tupaia_belangeri
ENSGMOG00000014802	rbm47	94	75.694	ENSTTRG00000002839	RBM47	100	74.309	Tursiops_truncatus
ENSGMOG00000014802	rbm47	94	76.562	ENSUAMG00000021346	RBM47	100	74.634	Ursus_americanus
ENSGMOG00000014802	rbm47	52	84.127	ENSVPAG00000000641	-	57	75.152	Vicugna_pacos
ENSGMOG00000014802	rbm47	93	76.307	ENSVVUG00000014774	RBM47	100	73.984	Vulpes_vulpes
ENSGMOG00000014802	rbm47	100	74.230	ENSXETG00000012802	rbm47	100	73.906	Xenopus_tropicalis
ENSGMOG00000014802	rbm47	100	84.343	ENSXCOG00000000780	rbm47	100	84.772	Xiphophorus_couchianus
ENSGMOG00000014802	rbm47	100	86.548	ENSXMAG00000009874	rbm47	100	87.310	Xiphophorus_maculatus