EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSGMOG00000014852 (Gene tree)
Gene ID: -
Gene Symbol: synj1
Alias: fb02f11|fi15a11|no optokinetic response c|nrc|slacker|slak|wu:fb02f11|wu:fi15a11
Full Name: synaptojanin 1
Gene Type: protein_coding
Species: Gadus_morhua
Status: putative
Strand: Plus strand
Length: 28466 bases
Position: chrGeneScaffold_4407:140245-168710
Accession: ZDB-GENE-030131-9180
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSGMOP00000015958	Exo_endo_phos	PF03372.23	2.3e-07	1	1
ENSGMOP00000015958	DUF1866	PF08952.11	2.8e-56	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSGMOT00000016366	-	3846	-	ENSGMOP00000015958	1282 (aa)	-	UPI00023F3306

Gene Model

Click here to download ENSGMOG00000014852's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSGMOG00000014852's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSGMOG00000014852	synj1	77	73.013	ENSG00000159082	SYNJ1	100	78.652	Homo_sapiens
ENSGMOG00000014852	synj1	80	86.819	ENSAPOG00000002809	synj1	78	86.819	Acanthochromis_polyacanthus
ENSGMOG00000014852	synj1	77	72.816	ENSAMEG00000015028	SYNJ1	62	73.188	Ailuropoda_melanoleuca
ENSGMOG00000014852	synj1	81	83.366	ENSACIG00000008857	synj1	89	77.051	Amphilophus_citrinellus
ENSGMOG00000014852	synj1	83	86.386	ENSAOCG00000009835	synj1	81	86.620	Amphiprion_ocellaris
ENSGMOG00000014852	synj1	80	86.620	ENSAPEG00000021010	synj1	63	86.010	Amphiprion_percula
ENSGMOG00000014852	synj1	80	85.233	ENSATEG00000002306	synj1	63	85.233	Anabas_testudineus
ENSGMOG00000014852	synj1	77	72.114	ENSAPLG00000011832	SYNJ1	64	72.376	Anas_platyrhynchos
ENSGMOG00000014852	synj1	77	73.503	ENSACAG00000003006	-	77	73.784	Anolis_carolinensis
ENSGMOG00000014852	synj1	77	72.718	ENSANAG00000027325	SYNJ1	77	73.088	Aotus_nancymaae
ENSGMOG00000014852	synj1	80	86.026	ENSACLG00000002255	synj1	79	86.224	Astatotilapia_calliptera
ENSGMOG00000014852	synj1	82	83.988	ENSAMXG00000008208	synj1	68	84.325	Astyanax_mexicanus
ENSGMOG00000014852	synj1	77	72.915	ENSBTAG00000003063	SYNJ1	76	73.188	Bos_taurus
ENSGMOG00000014852	synj1	77	72.718	ENSCJAG00000009187	SYNJ1	77	73.088	Callithrix_jacchus
ENSGMOG00000014852	synj1	77	72.130	ENSCAFG00000009041	SYNJ1	79	71.952	Canis_familiaris
ENSGMOG00000014852	synj1	77	72.620	ENSCAFG00020025776	SYNJ1	77	72.989	Canis_lupus_dingo
ENSGMOG00000014852	synj1	77	72.620	ENSCHIG00000005095	SYNJ1	66	72.890	Capra_hircus
ENSGMOG00000014852	synj1	77	72.620	ENSTSYG00000014541	SYNJ1	77	72.890	Carlito_syrichta
ENSGMOG00000014852	synj1	70	67.644	ENSCAPG00000014483	SYNJ1	66	67.802	Cavia_aperea
ENSGMOG00000014852	synj1	77	72.424	ENSCPOG00000012182	SYNJ1	76	72.790	Cavia_porcellus
ENSGMOG00000014852	synj1	77	72.522	ENSCCAG00000020825	SYNJ1	77	72.790	Cebus_capucinus
ENSGMOG00000014852	synj1	77	72.816	ENSCATG00000033891	SYNJ1	79	72.890	Cercocebus_atys
ENSGMOG00000014852	synj1	77	72.424	ENSCLAG00000009796	SYNJ1	93	79.116	Chinchilla_lanigera
ENSGMOG00000014852	synj1	77	72.816	ENSCSAG00000009654	SYNJ1	76	73.088	Chlorocebus_sabaeus
ENSGMOG00000014852	synj1	62	72.305	ENSCHOG00000012390	SYNJ1	51	72.305	Choloepus_hoffmanni
ENSGMOG00000014852	synj1	77	73.405	ENSCPBG00000006402	SYNJ1	80	73.188	Chrysemys_picta_bellii
ENSGMOG00000014852	synj1	77	72.816	ENSCANG00000031359	SYNJ1	77	73.188	Colobus_angolensis_palliatus
ENSGMOG00000014852	synj1	77	72.130	ENSCGRG00001010861	Synj1	77	72.493	Cricetulus_griseus_chok1gshd
ENSGMOG00000014852	synj1	77	72.130	ENSCGRG00000015749	Synj1	93	78.659	Cricetulus_griseus_crigri
ENSGMOG00000014852	synj1	80	86.224	ENSCSEG00000019614	synj1	82	86.224	Cynoglossus_semilaevis
ENSGMOG00000014852	synj1	80	83.382	ENSCVAG00000019250	synj1	80	83.382	Cyprinodon_variegatus
ENSGMOG00000014852	synj1	77	84.020	ENSDARG00000025011	synj1	80	84.425	Danio_rerio
ENSGMOG00000014852	synj1	77	69.110	ENSDNOG00000010732	SYNJ1	64	69.436	Dasypus_novemcinctus
ENSGMOG00000014852	synj1	51	79.116	ENSDORG00000014735	-	93	79.116	Dipodomys_ordii
ENSGMOG00000014852	synj1	63	77.936	ENSETEG00000018674	SYNJ1	53	77.936	Echinops_telfairi
ENSGMOG00000014852	synj1	77	72.326	ENSEASG00005006287	SYNJ1	96	72.240	Equus_asinus_asinus
ENSGMOG00000014852	synj1	77	72.424	ENSECAG00000004829	SYNJ1	79	72.294	Equus_caballus
ENSGMOG00000014852	synj1	67	71.561	ENSEEUG00000005150	SYNJ1	56	71.561	Erinaceus_europaeus
ENSGMOG00000014852	synj1	74	83.113	ENSELUG00000009731	synj1	75	82.400	Esox_lucius
ENSGMOG00000014852	synj1	77	72.718	ENSFCAG00000012498	SYNJ1	77	72.989	Felis_catus
ENSGMOG00000014852	synj1	77	72.718	ENSFDAG00000016818	SYNJ1	93	79.421	Fukomys_damarensis
ENSGMOG00000014852	synj1	82	85.113	ENSFHEG00000017689	synj1	64	84.631	Fundulus_heteroclitus
ENSGMOG00000014852	synj1	77	71.639	ENSGALG00000034317	SYNJ1	65	71.897	Gallus_gallus
ENSGMOG00000014852	synj1	81	83.890	ENSGAFG00000019466	synj1	64	84.044	Gambusia_affinis
ENSGMOG00000014852	synj1	80	87.700	ENSGACG00000020575	synj1	80	87.700	Gasterosteus_aculeatus
ENSGMOG00000014852	synj1	77	73.242	ENSGAGG00000022523	SYNJ1	76	73.518	Gopherus_agassizii
ENSGMOG00000014852	synj1	77	72.915	ENSGGOG00000015945	SYNJ1	79	72.989	Gorilla_gorilla
ENSGMOG00000014852	synj1	80	86.026	ENSHBUG00000007774	synj1	79	86.224	Haplochromis_burtoni
ENSGMOG00000014852	synj1	77	72.031	ENSHGLG00000006420	SYNJ1	93	78.811	Heterocephalus_glaber_female
ENSGMOG00000014852	synj1	77	72.031	ENSHGLG00100012591	SYNJ1	93	78.811	Heterocephalus_glaber_male
ENSGMOG00000014852	synj1	75	90.982	ENSHCOG00000012774	synj1	79	90.982	Hippocampus_comes
ENSGMOG00000014852	synj1	84	84.216	ENSIPUG00000010691	SYNJ1	70	85.020	Ictalurus_punctatus
ENSGMOG00000014852	synj1	77	72.718	ENSSTOG00000015806	SYNJ1	76	72.989	Ictidomys_tridecemlineatus
ENSGMOG00000014852	synj1	77	66.340	ENSJJAG00000020168	Synj1	62	66.534	Jaculus_jaculus
ENSGMOG00000014852	synj1	77	86.092	ENSKMAG00000004221	synj1	86	85.189	Kryptolebias_marmoratus
ENSGMOG00000014852	synj1	81	85.406	ENSLBEG00000015081	synj1	80	85.604	Labrus_bergylta
ENSGMOG00000014852	synj1	77	72.994	ENSLACG00000005928	SYNJ1	64	73.366	Latimeria_chalumnae
ENSGMOG00000014852	synj1	77	79.314	ENSLOCG00000009230	synj1	68	79.663	Lepisosteus_oculatus
ENSGMOG00000014852	synj1	77	72.326	ENSLAFG00000011806	SYNJ1	63	72.592	Loxodonta_africana
ENSGMOG00000014852	synj1	75	71.486	ENSMFAG00000018883	SYNJ1	76	72.389	Macaca_fascicularis
ENSGMOG00000014852	synj1	77	72.915	ENSMMUG00000004624	SYNJ1	76	73.386	Macaca_mulatta
ENSGMOG00000014852	synj1	77	72.816	ENSMNEG00000040077	SYNJ1	72	73.188	Macaca_nemestrina
ENSGMOG00000014852	synj1	77	72.718	ENSMLEG00000037029	SYNJ1	77	73.088	Mandrillus_leucophaeus
ENSGMOG00000014852	synj1	81	87.365	ENSMAMG00000013404	synj1	64	86.700	Mastacembelus_armatus
ENSGMOG00000014852	synj1	80	86.224	ENSMZEG00005024358	synj1	80	86.422	Maylandia_zebra
ENSGMOG00000014852	synj1	77	70.634	ENSMGAG00000014522	SYNJ1	64	70.879	Meleagris_gallopavo
ENSGMOG00000014852	synj1	77	72.326	ENSMAUG00000009743	Synj1	93	79.116	Mesocricetus_auratus
ENSGMOG00000014852	synj1	77	72.620	ENSMICG00000034953	SYNJ1	79	72.691	Microcebus_murinus
ENSGMOG00000014852	synj1	83	84.457	ENSMMOG00000010203	synj1	83	84.570	Mola_mola
ENSGMOG00000014852	synj1	77	68.540	ENSMODG00000021073	SYNJ1	76	68.818	Monodelphis_domestica
ENSGMOG00000014852	synj1	81	85.211	ENSMALG00000014015	synj1	64	84.729	Monopterus_albus
ENSGMOG00000014852	synj1	77	72.816	MGP_CAROLIEiJ_G0020951	Synj1	93	79.421	Mus_caroli
ENSGMOG00000014852	synj1	77	72.816	ENSMUSG00000022973	Synj1	93	79.268	Mus_musculus
ENSGMOG00000014852	synj1	77	72.620	MGP_PahariEiJ_G0016656	Synj1	93	79.268	Mus_pahari
ENSGMOG00000014852	synj1	77	72.915	MGP_SPRETEiJ_G0021857	Synj1	93	79.421	Mus_spretus
ENSGMOG00000014852	synj1	77	72.825	ENSMPUG00000001153	SYNJ1	64	73.195	Mustela_putorius_furo
ENSGMOG00000014852	synj1	51	73.275	ENSMLUG00000026584	-	100	73.275	Myotis_lucifugus
ENSGMOG00000014852	synj1	77	72.718	ENSNGAG00000000453	Synj1	93	79.421	Nannospalax_galili
ENSGMOG00000014852	synj1	80	81.331	ENSNBRG00000011936	synj1	78	79.054	Neolamprologus_brichardi
ENSGMOG00000014852	synj1	63	69.261	ENSNLEG00000003734	SYNJ1	76	69.705	Nomascus_leucogenys
ENSGMOG00000014852	synj1	71	58.612	ENSMEUG00000004158	-	59	58.885	Notamacropus_eugenii
ENSGMOG00000014852	synj1	69	71.103	ENSOPRG00000013602	SYNJ1	57	71.103	Ochotona_princeps
ENSGMOG00000014852	synj1	51	79.116	ENSODEG00000002409	-	93	79.116	Octodon_degus
ENSGMOG00000014852	synj1	76	86.918	ENSONIG00000004667	synj1	72	86.918	Oreochromis_niloticus
ENSGMOG00000014852	synj1	74	71.385	ENSOANG00000006929	SYNJ1	63	71.648	Ornithorhynchus_anatinus
ENSGMOG00000014852	synj1	77	72.522	ENSOCUG00000001420	SYNJ1	64	72.890	Oryctolagus_cuniculus
ENSGMOG00000014852	synj1	77	84.804	ENSORLG00000004320	synj1	79	84.936	Oryzias_latipes
ENSGMOG00000014852	synj1	77	82.647	ENSORLG00020011994	synj1	88	76.058	Oryzias_latipes_hni
ENSGMOG00000014852	synj1	77	84.706	ENSORLG00015018077	synj1	62	85.035	Oryzias_latipes_hsok
ENSGMOG00000014852	synj1	77	83.922	ENSOMEG00000014322	synj1	81	82.995	Oryzias_melastigma
ENSGMOG00000014852	synj1	77	68.359	ENSOGAG00000006010	SYNJ1	62	68.676	Otolemur_garnettii
ENSGMOG00000014852	synj1	77	72.532	ENSOARG00000013414	SYNJ1	62	72.799	Ovis_aries
ENSGMOG00000014852	synj1	77	72.915	ENSPPAG00000026784	SYNJ1	77	73.188	Pan_paniscus
ENSGMOG00000014852	synj1	77	72.718	ENSPPRG00000023469	SYNJ1	77	72.989	Panthera_pardus
ENSGMOG00000014852	synj1	77	72.816	ENSPTIG00000007930	SYNJ1	77	73.088	Panthera_tigris_altaica
ENSGMOG00000014852	synj1	77	72.915	ENSPTRG00000023787	SYNJ1	79	72.890	Pan_troglodytes
ENSGMOG00000014852	synj1	77	72.620	ENSPTRG00000048135	-	79	72.890	Pan_troglodytes
ENSGMOG00000014852	synj1	77	72.816	ENSPANG00000022531	SYNJ1	77	73.088	Papio_anubis
ENSGMOG00000014852	synj1	77	81.747	ENSPKIG00000022603	synj1	82	81.927	Paramormyrops_kingsleyae
ENSGMOG00000014852	synj1	84	83.843	ENSPMGG00000016831	synj1	76	83.865	Periophthalmus_magnuspinnatus
ENSGMOG00000014852	synj1	77	72.915	ENSPEMG00000018767	Synj1	93	79.573	Peromyscus_maniculatus_bairdii
ENSGMOG00000014852	synj1	77	55.458	ENSPMAG00000002887	synj1	76	56.102	Petromyzon_marinus
ENSGMOG00000014852	synj1	77	70.907	ENSPCIG00000016372	SYNJ1	76	71.202	Phascolarctos_cinereus
ENSGMOG00000014852	synj1	81	85.225	ENSPFOG00000016886	synj1	80	85.347	Poecilia_formosa
ENSGMOG00000014852	synj1	81	84.525	ENSPLAG00000017559	synj1	79	82.512	Poecilia_latipinna
ENSGMOG00000014852	synj1	82	84.427	ENSPMEG00000007643	synj1	64	84.539	Poecilia_mexicana
ENSGMOG00000014852	synj1	83	85.113	ENSPREG00000012412	synj1	79	85.233	Poecilia_reticulata
ENSGMOG00000014852	synj1	77	72.718	ENSPPYG00000011365	SYNJ1	72	73.088	Pongo_abelii
ENSGMOG00000014852	synj1	69	75.682	ENSPCOG00000024841	SYNJ1	74	75.682	Propithecus_coquereli
ENSGMOG00000014852	synj1	77	68.560	ENSPVAG00000000892	SYNJ1	64	68.880	Pteropus_vampyrus
ENSGMOG00000014852	synj1	80	85.035	ENSPNYG00000022989	synj1	80	85.233	Pundamilia_nyererei
ENSGMOG00000014852	synj1	77	85.294	ENSPNAG00000021119	synj1	83	85.516	Pygocentrus_nattereri
ENSGMOG00000014852	synj1	77	72.915	ENSRNOG00000002051	Synj1	77	73.287	Rattus_norvegicus
ENSGMOG00000014852	synj1	77	72.718	ENSRBIG00000034477	SYNJ1	77	73.088	Rhinopithecus_bieti
ENSGMOG00000014852	synj1	77	72.816	ENSRROG00000039256	SYNJ1	77	73.188	Rhinopithecus_roxellana
ENSGMOG00000014852	synj1	77	72.620	ENSSBOG00000021001	SYNJ1	77	72.890	Saimiri_boliviensis_boliviensis
ENSGMOG00000014852	synj1	77	71.400	ENSSHAG00000008538	SYNJ1	64	71.698	Sarcophilus_harrisii
ENSGMOG00000014852	synj1	82	83.694	ENSSFOG00015006095	synj1	66	83.897	Scleropages_formosus
ENSGMOG00000014852	synj1	80	86.778	ENSSMAG00000018066	synj1	80	84.399	Scophthalmus_maximus
ENSGMOG00000014852	synj1	81	86.876	ENSSDUG00000013058	synj1	64	86.108	Seriola_dumerili
ENSGMOG00000014852	synj1	81	87.463	ENSSLDG00000021406	synj1	80	87.314	Seriola_lalandi_dorsalis
ENSGMOG00000014852	synj1	77	72.522	ENSSPUG00000012552	SYNJ1	65	72.790	Sphenodon_punctatus
ENSGMOG00000014852	synj1	81	85.411	ENSSPAG00000017029	synj1	79	85.411	Stegastes_partitus
ENSGMOG00000014852	synj1	75	86.432	ENSSPAG00000006812	SYNJ1	62	85.775	Stegastes_partitus
ENSGMOG00000014852	synj1	77	72.228	ENSSSCG00000012035	SYNJ1	78	72.493	Sus_scrofa
ENSGMOG00000014852	synj1	77	72.363	ENSTGUG00000013445	SYNJ1	64	72.628	Taeniopygia_guttata
ENSGMOG00000014852	synj1	83	84.211	ENSTRUG00000006907	synj1	81	85.089	Takifugu_rubripes
ENSGMOG00000014852	synj1	77	81.298	ENSTNIG00000009940	synj1	76	81.176	Tetraodon_nigroviridis
ENSGMOG00000014852	synj1	73	81.646	ENSTBEG00000016298	SYNJ1	60	81.646	Tupaia_belangeri
ENSGMOG00000014852	synj1	77	65.162	ENSTTRG00000002222	SYNJ1	65	65.343	Tursiops_truncatus
ENSGMOG00000014852	synj1	77	72.816	ENSUAMG00000018606	SYNJ1	98	73.712	Ursus_americanus
ENSGMOG00000014852	synj1	77	72.816	ENSUMAG00000018419	SYNJ1	99	73.081	Ursus_maritimus
ENSGMOG00000014852	synj1	70	82.857	ENSVPAG00000001241	SYNJ1	58	82.857	Vicugna_pacos
ENSGMOG00000014852	synj1	77	72.718	ENSVVUG00000023125	SYNJ1	76	72.989	Vulpes_vulpes
ENSGMOG00000014852	synj1	77	69.981	ENSXETG00000009899	synj1	64	70.217	Xenopus_tropicalis
ENSGMOG00000014852	synj1	81	85.504	ENSXCOG00000011896	synj1	81	85.629	Xiphophorus_couchianus
ENSGMOG00000014852	synj1	83	85.113	ENSXMAG00000017524	synj1	80	85.233	Xiphophorus_maculatus