EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSGMOG00000014908 (Gene tree)
Gene ID: -
Gene Symbol: vars
Alias: CHUNP6879|im:7137378|vars2|wu:fb07a11|wu:fb07d10
Full Name: valyl-tRNA synthetase
Gene Type: protein_coding
Species: Gadus_morhua
Status: putative
Strand: Minus strand
Length: 25355 bases
Position: chrGeneScaffold_1963:211752-237106
Accession: ZDB-GENE-010601-1
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSGMOP00000016009	tRNA-synt_1g	PF09334.11	8e-12	1	1
ENSGMOP00000016009	Anticodon_1	PF08264.13	9.1e-37	1	1
ENSGMOP00000016009	tRNA-synt_1	PF00133.22	3.3e-205	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSGMOT00000016418	-	3696	-	ENSGMOP00000016009	1231 (aa)	-	UPI00023F33D4

Gene Model

Click here to download ENSGMOG00000014908's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSGMOG00000014908's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSGMOG00000014908	vars	78	50.512	ENSGMOG00000018960	vars2	99	50.512

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSGMOG00000014908	vars	97	65.890	ENSG00000204394	VARS	99	71.166	Homo_sapiens
ENSGMOG00000014908	vars	98	78.385	ENSAPOG00000020691	vars	96	81.916	Acanthochromis_polyacanthus
ENSGMOG00000014908	vars	98	78.385	ENSAPOG00000020921	vars	96	81.916	Acanthochromis_polyacanthus
ENSGMOG00000014908	vars	97	66.251	ENSAMEG00000006417	VARS	92	66.251	Ailuropoda_melanoleuca
ENSGMOG00000014908	vars	100	80.560	ENSACIG00000013752	vars	100	80.560	Amphilophus_citrinellus
ENSGMOG00000014908	vars	100	82.463	ENSAOCG00000002447	vars	99	82.229	Amphiprion_ocellaris
ENSGMOG00000014908	vars	100	82.541	ENSAPEG00000010638	vars	99	82.307	Amphiprion_percula
ENSGMOG00000014908	vars	100	78.227	ENSATEG00000020219	vars	100	77.838	Anabas_testudineus
ENSGMOG00000014908	vars	89	69.037	ENSACAG00000029133	-	99	69.037	Anolis_carolinensis
ENSGMOG00000014908	vars	97	66.030	ENSANAG00000015453	VARS	92	66.030	Aotus_nancymaae
ENSGMOG00000014908	vars	100	81.620	ENSACLG00000025699	vars	97	81.620	Astatotilapia_calliptera
ENSGMOG00000014908	vars	95	76.967	ENSAMXG00000017716	vars	96	76.967	Astyanax_mexicanus
ENSGMOG00000014908	vars	97	66.223	ENSBTAG00000005631	VARS	92	66.223	Bos_taurus
ENSGMOG00000014908	vars	97	65.947	ENSCJAG00000002604	VARS	92	65.947	Callithrix_jacchus
ENSGMOG00000014908	vars	97	65.724	ENSCAFG00000000636	VARS	92	65.724	Canis_familiaris
ENSGMOG00000014908	vars	91	67.201	ENSCAFG00020020790	VARS	88	67.201	Canis_lupus_dingo
ENSGMOG00000014908	vars	97	66.083	ENSCHIG00000011008	VARS	93	66.000	Capra_hircus
ENSGMOG00000014908	vars	97	66.083	ENSTSYG00000001567	VARS	92	65.973	Carlito_syrichta
ENSGMOG00000014908	vars	94	66.781	ENSCAPG00000013736	VARS	98	66.209	Cavia_aperea
ENSGMOG00000014908	vars	97	65.973	ENSCPOG00000000870	VARS	92	65.417	Cavia_porcellus
ENSGMOG00000014908	vars	97	65.975	ENSCCAG00000035656	VARS	100	60.539	Cebus_capucinus
ENSGMOG00000014908	vars	97	66.306	ENSCATG00000022394	VARS	100	59.322	Cercocebus_atys
ENSGMOG00000014908	vars	94	64.815	ENSCLAG00000009470	VARS	93	63.956	Chinchilla_lanigera
ENSGMOG00000014908	vars	97	66.140	ENSCSAG00000008784	VARS	92	66.057	Chlorocebus_sabaeus
ENSGMOG00000014908	vars	80	73.732	ENSCPBG00000007943	VARS	96	74.335	Chrysemys_picta_bellii
ENSGMOG00000014908	vars	97	66.306	ENSCANG00000033570	VARS	92	66.223	Colobus_angolensis_palliatus
ENSGMOG00000014908	vars	97	66.500	ENSCGRG00001005686	Vars	93	65.757	Cricetulus_griseus_chok1gshd
ENSGMOG00000014908	vars	97	62.367	ENSCGRG00000013352	Vars	78	62.286	Cricetulus_griseus_crigri
ENSGMOG00000014908	vars	100	77.336	ENSCSEG00000019652	vars	100	77.336	Cynoglossus_semilaevis
ENSGMOG00000014908	vars	100	81.698	ENSCVAG00000022398	vars	100	81.386	Cyprinodon_variegatus
ENSGMOG00000014908	vars	100	80.312	ENSDARG00000044575	vars	100	80.156	Danio_rerio
ENSGMOG00000014908	vars	89	67.623	ENSDORG00000016433	Vars	93	70.526	Dipodomys_ordii
ENSGMOG00000014908	vars	72	72.875	ENSETEG00000003824	VARS	77	72.875	Echinops_telfairi
ENSGMOG00000014908	vars	59	63.836	ENSEBUG00000004637	vars	100	63.836	Eptatretus_burgeri
ENSGMOG00000014908	vars	53	71.750	ENSEBUG00000007086	vars	82	71.750	Eptatretus_burgeri
ENSGMOG00000014908	vars	97	66.389	ENSEASG00005015673	VARS	92	66.389	Equus_asinus_asinus
ENSGMOG00000014908	vars	97	66.251	ENSECAG00000014620	VARS	92	66.251	Equus_caballus
ENSGMOG00000014908	vars	75	69.925	ENSEEUG00000004116	VARS	73	69.925	Erinaceus_europaeus
ENSGMOG00000014908	vars	100	80.233	ENSELUG00000006550	vars	97	80.016	Esox_lucius
ENSGMOG00000014908	vars	97	66.140	ENSFCAG00000004510	VARS	92	66.140	Felis_catus
ENSGMOG00000014908	vars	86	69.860	ENSFDAG00000011401	VARS	100	69.162	Fukomys_damarensis
ENSGMOG00000014908	vars	100	80.685	ENSFHEG00000010672	vars	100	80.919	Fundulus_heteroclitus
ENSGMOG00000014908	vars	100	81.153	ENSGAFG00000021630	vars	100	81.153	Gambusia_affinis
ENSGMOG00000014908	vars	100	85.215	ENSGACG00000009601	vars	100	84.647	Gasterosteus_aculeatus
ENSGMOG00000014908	vars	97	66.140	ENSGGOG00000011364	VARS	92	66.057	Gorilla_gorilla
ENSGMOG00000014908	vars	100	81.698	ENSHBUG00000017151	vars	97	81.698	Haplochromis_burtoni
ENSGMOG00000014908	vars	97	65.445	ENSHGLG00000011646	VARS	92	65.445	Heterocephalus_glaber_female
ENSGMOG00000014908	vars	97	60.439	ENSHGLG00100018062	VARS	99	60.359	Heterocephalus_glaber_male
ENSGMOG00000014908	vars	99	78.939	ENSHCOG00000012198	vars	97	83.350	Hippocampus_comes
ENSGMOG00000014908	vars	100	79.875	ENSIPUG00000005218	vars	100	79.485	Ictalurus_punctatus
ENSGMOG00000014908	vars	97	66.667	ENSSTOG00000013112	VARS	92	66.333	Ictidomys_tridecemlineatus
ENSGMOG00000014908	vars	97	65.835	ENSJJAG00000019749	-	92	65.609	Jaculus_jaculus
ENSGMOG00000014908	vars	100	52.328	ENSJJAG00000015343	-	100	52.102	Jaculus_jaculus
ENSGMOG00000014908	vars	100	78.410	ENSKMAG00000009455	vars	100	78.410	Kryptolebias_marmoratus
ENSGMOG00000014908	vars	100	80.382	ENSLBEG00000010341	vars	99	80.153	Labrus_bergylta
ENSGMOG00000014908	vars	94	64.140	ENSLACG00000015232	VARS	99	64.524	Latimeria_chalumnae
ENSGMOG00000014908	vars	100	72.905	ENSLOCG00000004240	vars	100	73.140	Lepisosteus_oculatus
ENSGMOG00000014908	vars	97	66.222	ENSLAFG00000023090	VARS	92	66.055	Loxodonta_africana
ENSGMOG00000014908	vars	97	66.140	ENSMFAG00000001032	VARS	92	66.057	Macaca_fascicularis
ENSGMOG00000014908	vars	97	66.140	ENSMMUG00000006828	VARS	92	66.057	Macaca_mulatta
ENSGMOG00000014908	vars	97	66.140	ENSMNEG00000042072	VARS	92	66.057	Macaca_nemestrina
ENSGMOG00000014908	vars	97	66.223	ENSMLEG00000039307	VARS	92	66.140	Mandrillus_leucophaeus
ENSGMOG00000014908	vars	100	81.138	ENSMAMG00000003949	vars	100	81.182	Mastacembelus_armatus
ENSGMOG00000014908	vars	100	81.620	ENSMZEG00005018327	vars	97	81.620	Maylandia_zebra
ENSGMOG00000014908	vars	97	66.333	ENSMAUG00000006715	Vars	92	66.333	Mesocricetus_auratus
ENSGMOG00000014908	vars	97	66.722	ENSMICG00000003548	VARS	100	61.520	Microcebus_murinus
ENSGMOG00000014908	vars	97	65.362	ENSMOCG00000015404	Vars	92	65.362	Microtus_ochrogaster
ENSGMOG00000014908	vars	100	78.410	ENSMMOG00000015801	vars	100	77.838	Mola_mola
ENSGMOG00000014908	vars	97	66.750	ENSMODG00000015204	-	92	66.500	Monodelphis_domestica
ENSGMOG00000014908	vars	99	81.435	ENSMALG00000022532	vars	99	81.435	Monopterus_albus
ENSGMOG00000014908	vars	97	66.639	MGP_CAROLIEiJ_G0021491	Vars	92	66.555	Mus_caroli
ENSGMOG00000014908	vars	97	66.722	ENSMUSG00000007029	Vars	92	66.555	Mus_musculus
ENSGMOG00000014908	vars	97	66.639	MGP_PahariEiJ_G0020486	Vars	92	66.555	Mus_pahari
ENSGMOG00000014908	vars	97	66.806	MGP_SPRETEiJ_G0022396	Vars	92	66.639	Mus_spretus
ENSGMOG00000014908	vars	97	65.917	ENSMPUG00000010821	VARS	92	65.917	Mustela_putorius_furo
ENSGMOG00000014908	vars	74	69.859	ENSMLUG00000013126	VARS	90	69.390	Myotis_lucifugus
ENSGMOG00000014908	vars	97	66.278	ENSNGAG00000012151	Vars	92	66.278	Nannospalax_galili
ENSGMOG00000014908	vars	100	81.776	ENSNBRG00000020520	vars	100	81.776	Neolamprologus_brichardi
ENSGMOG00000014908	vars	97	65.890	ENSNLEG00000006351	VARS	100	58.373	Nomascus_leucogenys
ENSGMOG00000014908	vars	90	71.242	ENSMEUG00000011378	VARS	87	71.457	Notamacropus_eugenii
ENSGMOG00000014908	vars	98	66.501	ENSOPRG00000003607	VARS	93	66.336	Ochotona_princeps
ENSGMOG00000014908	vars	97	65.557	ENSODEG00000017681	VARS	93	64.867	Octodon_degus
ENSGMOG00000014908	vars	100	80.930	ENSONIG00000013064	vars	100	85.381	Oreochromis_niloticus
ENSGMOG00000014908	vars	76	66.347	ENSOANG00000005400	VARS	98	65.990	Ornithorhynchus_anatinus
ENSGMOG00000014908	vars	100	80.997	ENSORLG00000013063	vars	100	81.153	Oryzias_latipes
ENSGMOG00000014908	vars	100	81.464	ENSORLG00020003504	vars	100	81.060	Oryzias_latipes_hni
ENSGMOG00000014908	vars	100	81.528	ENSORLG00015009001	vars	100	81.138	Oryzias_latipes_hsok
ENSGMOG00000014908	vars	100	81.138	ENSOMEG00000015016	vars	100	80.748	Oryzias_melastigma
ENSGMOG00000014908	vars	97	65.417	ENSOGAG00000007515	VARS	92	65.333	Otolemur_garnettii
ENSGMOG00000014908	vars	97	66.140	ENSPPAG00000034012	VARS	92	66.140	Pan_paniscus
ENSGMOG00000014908	vars	97	66.140	ENSPPRG00000014855	VARS	92	66.140	Panthera_pardus
ENSGMOG00000014908	vars	89	67.847	ENSPTIG00000010462	VARS	93	67.847	Panthera_tigris_altaica
ENSGMOG00000014908	vars	97	66.140	ENSPTRG00000017985	VARS	92	66.140	Pan_troglodytes
ENSGMOG00000014908	vars	97	64.628	ENSPANG00000014565	VARS	92	64.545	Papio_anubis
ENSGMOG00000014908	vars	100	78.220	ENSPKIG00000016304	vars	100	77.856	Paramormyrops_kingsleyae
ENSGMOG00000014908	vars	100	78.176	ENSPMGG00000023909	vars	100	78.020	Periophthalmus_magnuspinnatus
ENSGMOG00000014908	vars	97	66.417	ENSPEMG00000006639	Vars	92	66.583	Peromyscus_maniculatus_bairdii
ENSGMOG00000014908	vars	97	66.167	ENSPCIG00000018553	VARS	92	65.917	Phascolarctos_cinereus
ENSGMOG00000014908	vars	100	81.542	ENSPFOG00000015690	vars	100	81.386	Poecilia_formosa
ENSGMOG00000014908	vars	100	81.386	ENSPLAG00000009590	vars	100	81.231	Poecilia_latipinna
ENSGMOG00000014908	vars	100	81.542	ENSPMEG00000004708	vars	100	81.386	Poecilia_mexicana
ENSGMOG00000014908	vars	100	77.648	ENSPREG00000013264	vars	97	87.873	Poecilia_reticulata
ENSGMOG00000014908	vars	97	63.749	ENSPPYG00000016460	VARS	92	64.393	Pongo_abelii
ENSGMOG00000014908	vars	83	66.430	ENSPCAG00000013565	VARS	78	66.430	Procavia_capensis
ENSGMOG00000014908	vars	97	66.028	ENSPCOG00000010942	VARS	92	65.862	Propithecus_coquereli
ENSGMOG00000014908	vars	97	64.226	ENSPVAG00000012403	VARS	92	63.667	Pteropus_vampyrus
ENSGMOG00000014908	vars	100	81.776	ENSPNYG00000022511	vars	100	81.776	Pundamilia_nyererei
ENSGMOG00000014908	vars	100	79.517	ENSPNAG00000020962	vars	100	79.037	Pygocentrus_nattereri
ENSGMOG00000014908	vars	97	66.583	ENSRNOG00000000867	Vars	92	66.333	Rattus_norvegicus
ENSGMOG00000014908	vars	97	66.223	ENSRBIG00000041669	VARS	100	59.322	Rhinopithecus_bieti
ENSGMOG00000014908	vars	97	66.223	ENSRROG00000045490	VARS	92	66.140	Rhinopithecus_roxellana
ENSGMOG00000014908	vars	97	65.698	ENSSBOG00000035402	VARS	92	65.698	Saimiri_boliviensis_boliviensis
ENSGMOG00000014908	vars	94	66.981	ENSSHAG00000006937	VARS	90	66.695	Sarcophilus_harrisii
ENSGMOG00000014908	vars	100	77.283	ENSSFOG00015014272	vars	98	83.740	Scleropages_formosus
ENSGMOG00000014908	vars	100	81.684	ENSSMAG00000009596	vars	99	81.606	Scophthalmus_maximus
ENSGMOG00000014908	vars	100	83.009	ENSSDUG00000014177	vars	100	82.775	Seriola_dumerili
ENSGMOG00000014908	vars	100	83.164	ENSSLDG00000025316	vars	100	82.931	Seriola_lalandi_dorsalis
ENSGMOG00000014908	vars	100	82.151	ENSSPAG00000017068	vars	100	81.839	Stegastes_partitus
ENSGMOG00000014908	vars	97	65.779	ENSSSCG00000038950	VARS	92	65.779	Sus_scrofa
ENSGMOG00000014908	vars	80	75.432	ENSTRUG00000012307	vars	97	74.665	Takifugu_rubripes
ENSGMOG00000014908	vars	100	82.778	ENSTNIG00000008011	vars	100	82.616	Tetraodon_nigroviridis
ENSGMOG00000014908	vars	97	60.117	ENSTTRG00000014128	VARS	87	66.496	Tursiops_truncatus
ENSGMOG00000014908	vars	97	64.750	ENSUAMG00000010424	VARS	92	64.583	Ursus_americanus
ENSGMOG00000014908	vars	97	61.069	ENSUMAG00000013486	VARS	92	60.902	Ursus_maritimus
ENSGMOG00000014908	vars	97	66.030	ENSVVUG00000021323	VARS	94	63.977	Vulpes_vulpes
ENSGMOG00000014908	vars	97	65.372	ENSXETG00000024076	vars	93	65.149	Xenopus_tropicalis
ENSGMOG00000014908	vars	100	79.283	ENSXCOG00000019172	vars	100	79.283	Xiphophorus_couchianus
ENSGMOG00000014908	vars	100	81.620	ENSXMAG00000010927	vars	100	81.464	Xiphophorus_maculatus