EuRBPDB

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  • Description
  • RBDs
  • Transcripts
  • Gene Model
  • PPI
  • Paralogs
  • Orthologs
Description
Ensembl ID
ENSGMOG00000014954 (Gene tree)
Gene ID
-
Gene Symbol
srl
Alias
im:6899248|wu:fb94b10|zgc:153844
Full Name
sarcalumenin
Gene Type
protein_coding
Species
Gadus_morhua
Status
putative
Strand
Plus strand
Length
5401 bases
Position
chrGeneScaffold_2217:183141-188541
Accession
ZDB-GENE-061110-91
RBP type
canonical RBP
Summary
-
RNA binding domains(RBDs)
Protein IDDomain Pfam IDE-value Domain number Total number
ENSGMOP00000016002MMR_HSR1PF01926.238.5e-0911
Transcripts
Transcript IDNameLengthRefSeq ID Protein IDLengthRefSeq IDUniportKB ID
ENSGMOT00000016411-1362-ENSGMOP00000016002454 (aa)-UPI00023F349B
Gene Model
Click here to download ENSGMOG00000014954's gene model file
Protein-Protein Interaction (PPI)

Clik here to download ENSGMOG00000014954's network
Paralogs
Ensembl IDGene SymbolCoverageIdentiy ParalogGene SymbolCoverageIdentiy
ENSGMOG00000014954srl5638.281ENSGMOG00000000211-5535.599
ENSGMOG00000014954srl9479.108ENSGMOG00000015214SRL9979.108
ENSGMOG00000014954srl8931.683ENSGMOG00000006447ehd37731.193
ENSGMOG00000014954srl8233.871ENSGMOG00000013367ehd2b6533.871
ENSGMOG00000014954srl8831.078ENSGMOG00000012192ehd1a7131.078
Orthologs
Ensembl IDGene SymbolCoverageIdentiy OrthologGene SymbolCoverageIdentiy Species
ENSGMOG00000014954srl9981.678ENSG00000185739SRL9982.086Homo_sapiens
ENSGMOG00000014954srl10090.749ENSAPOG00000018093srl9990.708Acanthochromis_polyacanthus
ENSGMOG00000014954srl10075.551ENSAPOG00000012432SRL9875.551Acanthochromis_polyacanthus
ENSGMOG00000014954srl9981.015ENSAMEG00000010862SRL5081.015Ailuropoda_melanoleuca
ENSGMOG00000014954srl10089.427ENSACIG00000015799srl9889.427Amphilophus_citrinellus
ENSGMOG00000014954srl10075.110ENSACIG00000015419SRL9875.110Amphilophus_citrinellus
ENSGMOG00000014954srl10075.824ENSAOCG00000017049SRL9676.044Amphiprion_ocellaris
ENSGMOG00000014954srl9891.236ENSAOCG00000007574srl9991.236Amphiprion_ocellaris
ENSGMOG00000014954srl10072.687ENSAPEG00000006533SRL9673.187Amphiprion_percula
ENSGMOG00000014954srl10092.731ENSAPEG00000006911srl9492.731Amphiprion_percula
ENSGMOG00000014954srl10092.291ENSATEG00000024315srl9492.291Anabas_testudineus
ENSGMOG00000014954srl10075.161ENSATEG00000009643SRL5275.161Anabas_testudineus
ENSGMOG00000014954srl9983.186ENSACAG00000016380SRL8383.040Anolis_carolinensis
ENSGMOG00000014954srl10073.233ENSACLG00000024674SRL5477.694Astatotilapia_calliptera
ENSGMOG00000014954srl10091.850ENSACLG00000027685srl9789.648Astatotilapia_calliptera
ENSGMOG00000014954srl9990.728ENSAMXG00000018789srl8790.728Astyanax_mexicanus
ENSGMOG00000014954srl9576.389ENSAMXG00000038693SRL9972.845Astyanax_mexicanus
ENSGMOG00000014954srl9981.015ENSBTAG00000001078SRL5681.015Bos_taurus
ENSGMOG00000014954srl9981.898ENSCJAG00000019750SRL9381.898Callithrix_jacchus
ENSGMOG00000014954srl9981.015ENSCAFG00000019233SRL8281.015Canis_familiaris
ENSGMOG00000014954srl9981.015ENSCAFG00020025024SRL5481.015Canis_lupus_dingo
ENSGMOG00000014954srl9981.015ENSCHIG00000017927SRL5581.015Capra_hircus
ENSGMOG00000014954srl9981.457ENSTSYG00000007919SRL9982.086Carlito_syrichta
ENSGMOG00000014954srl9980.795ENSCPOG00000012643SRL9380.795Cavia_porcellus
ENSGMOG00000014954srl9976.600ENSCCAG00000032646SRL9985.185Cebus_capucinus
ENSGMOG00000014954srl9981.678ENSCATG00000032227-9381.678Cercocebus_atys
ENSGMOG00000014954srl9980.574ENSCLAG00000016242SRL9380.574Chinchilla_lanigera
ENSGMOG00000014954srl8584.935ENSCHOG00000001618SRL5284.935Choloepus_hoffmanni
ENSGMOG00000014954srl9785.233ENSCPBG00000026371SRL9482.159Chrysemys_picta_bellii
ENSGMOG00000014954srl9458.275ENSCING00000005231-9358.275Ciona_intestinalis
ENSGMOG00000014954srl9981.678ENSCANG00000035872SRL9982.086Colobus_angolensis_palliatus
ENSGMOG00000014954srl9981.236ENSCGRG00001016630Srl9381.236Cricetulus_griseus_chok1gshd
ENSGMOG00000014954srl9981.236ENSCGRG00000005458Srl9381.236Cricetulus_griseus_crigri
ENSGMOG00000014954srl10091.630ENSCSEG00000016151srl9491.630Cynoglossus_semilaevis
ENSGMOG00000014954srl9974.229ENSCSEG00000011866SRL8974.449Cynoglossus_semilaevis
ENSGMOG00000014954srl10092.291ENSCVAG00000003513srl9492.291Cyprinodon_variegatus
ENSGMOG00000014954srl10075.216ENSCVAG00000022465SRL6075.216Cyprinodon_variegatus
ENSGMOG00000014954srl9990.728ENSDARG00000104587srl9490.728Danio_rerio
ENSGMOG00000014954srl8378.851ENSDARG00000112959CABZ01072309.19978.851Danio_rerio
ENSGMOG00000014954srl9981.236ENSDNOG00000011643SRL5381.236Dasypus_novemcinctus
ENSGMOG00000014954srl9980.795ENSDORG00000014807Srl9380.795Dipodomys_ordii
ENSGMOG00000014954srl8264.171ENSEBUG00000015937srl9464.171Eptatretus_burgeri
ENSGMOG00000014954srl9981.015ENSEASG00005000942SRL5381.015Equus_asinus_asinus
ENSGMOG00000014954srl9981.015ENSECAG00000024219SRL9381.015Equus_caballus
ENSGMOG00000014954srl9989.011ENSELUG00000015616srl9389.011Esox_lucius
ENSGMOG00000014954srl9980.795ENSFCAG00000022075SRL9380.795Felis_catus
ENSGMOG00000014954srl9980.310ENSFALG00000004328SRL6380.310Ficedula_albicollis
ENSGMOG00000014954srl9981.236ENSFDAG00000006199SRL9381.236Fukomys_damarensis
ENSGMOG00000014954srl10091.410ENSFHEG00000011239srl9491.410Fundulus_heteroclitus
ENSGMOG00000014954srl10074.890ENSFHEG00000011854SRL9875.110Fundulus_heteroclitus
ENSGMOG00000014954srl9982.080ENSGALG00000038884SRL9380.310Gallus_gallus
ENSGMOG00000014954srl10091.189ENSGAFG00000000010srl9491.189Gambusia_affinis
ENSGMOG00000014954srl10076.264ENSGAFG00000016984SRL9876.264Gambusia_affinis
ENSGMOG00000014954srl10092.511ENSGACG00000011332srl9992.511Gasterosteus_aculeatus
ENSGMOG00000014954srl9981.678ENSGGOG00000011312-9381.678Gorilla_gorilla
ENSGMOG00000014954srl10091.850ENSHBUG00000007581srl9789.648Haplochromis_burtoni
ENSGMOG00000014954srl10073.662ENSHBUG00000015710SRL5773.662Haplochromis_burtoni
ENSGMOG00000014954srl9981.457ENSHGLG00000015271SRL9381.457Heterocephalus_glaber_female
ENSGMOG00000014954srl9981.457ENSHGLG00100019378SRL9381.457Heterocephalus_glaber_male
ENSGMOG00000014954srl10092.511ENSHCOG00000008687srl9890.529Hippocampus_comes
ENSGMOG00000014954srl10073.176ENSHCOG00000001012SRL5073.176Hippocampus_comes
ENSGMOG00000014954srl10088.987ENSIPUG00000012513srl9488.987Ictalurus_punctatus
ENSGMOG00000014954srl9968.805ENSIPUG00000011609SRL9668.805Ictalurus_punctatus
ENSGMOG00000014954srl9981.457ENSSTOG00000021151-9381.457Ictidomys_tridecemlineatus
ENSGMOG00000014954srl9981.015ENSJJAG00000016400Srl9381.015Jaculus_jaculus
ENSGMOG00000014954srl9975.442ENSKMAG00000019537SRL9975.442Kryptolebias_marmoratus
ENSGMOG00000014954srl9891.441ENSKMAG00000014115srl9390.741Kryptolebias_marmoratus
ENSGMOG00000014954srl9974.172ENSLBEG00000013811SRL9574.393Labrus_bergylta
ENSGMOG00000014954srl10091.189ENSLBEG00000026643srl9491.189Labrus_bergylta
ENSGMOG00000014954srl9982.561ENSLACG00000002825SRL9881.015Latimeria_chalumnae
ENSGMOG00000014954srl10087.225ENSLOCG00000002644srl9487.225Lepisosteus_oculatus
ENSGMOG00000014954srl9981.015ENSLAFG00000006329SRL5081.015Loxodonta_africana
ENSGMOG00000014954srl9782.086ENSMFAG00000037383SRL9982.086Macaca_fascicularis
ENSGMOG00000014954srl9981.678ENSMNEG00000019236-9381.678Macaca_nemestrina
ENSGMOG00000014954srl9974.393ENSMLEG00000032156SRL9374.393Mandrillus_leucophaeus
ENSGMOG00000014954srl10089.868ENSMAMG00000023322srl9489.868Mastacembelus_armatus
ENSGMOG00000014954srl9974.409ENSMAMG00000013756SRL5374.409Mastacembelus_armatus
ENSGMOG00000014954srl10073.448ENSMZEG00005004010SRL5773.448Maylandia_zebra
ENSGMOG00000014954srl10091.850ENSMZEG00005004548srl9789.648Maylandia_zebra
ENSGMOG00000014954srl9980.310ENSMGAG00000009342SRL9283.024Meleagris_gallopavo
ENSGMOG00000014954srl9980.574ENSMICG00000032307SRL9380.574Microcebus_murinus
ENSGMOG00000014954srl9980.795ENSMOCG00000008208Srl9380.795Microtus_ochrogaster
ENSGMOG00000014954srl9989.404ENSMMOG00000013970srl9889.404Mola_mola
ENSGMOG00000014954srl10075.439ENSMMOG00000021572SRL9975.439Mola_mola
ENSGMOG00000014954srl9981.015ENSMODG00000016380-5081.015Monodelphis_domestica
ENSGMOG00000014954srl9576.279ENSMALG00000000670SRL9876.279Monopterus_albus
ENSGMOG00000014954srl10088.767ENSMALG00000005039srl9888.767Monopterus_albus
ENSGMOG00000014954srl9981.015MGP_CAROLIEiJ_G0020400Srl9381.015Mus_caroli
ENSGMOG00000014954srl9981.015ENSMUSG00000022519Srl9381.015Mus_musculus
ENSGMOG00000014954srl9981.015MGP_SPRETEiJ_G0021294Srl9381.015Mus_spretus
ENSGMOG00000014954srl9981.015ENSMPUG00000015025SRL5381.015Mustela_putorius_furo
ENSGMOG00000014954srl9981.236ENSMLUG00000030733SRL5581.236Myotis_lucifugus
ENSGMOG00000014954srl9980.795ENSNGAG00000019741Srl9380.795Nannospalax_galili
ENSGMOG00000014954srl10073.019ENSNBRG00000002422SRL5674.266Neolamprologus_brichardi
ENSGMOG00000014954srl10089.427ENSNBRG00000023775srl9489.427Neolamprologus_brichardi
ENSGMOG00000014954srl9975.717ENSNLEG00000029051SRL9375.717Nomascus_leucogenys
ENSGMOG00000014954srl9974.834ENSOPRG00000000477-5274.834Ochotona_princeps
ENSGMOG00000014954srl9980.574ENSODEG00000013256SRL9380.574Octodon_degus
ENSGMOG00000014954srl10091.850ENSONIG00000005192srl9491.850Oreochromis_niloticus
ENSGMOG00000014954srl10073.348ENSORLG00000015064SRL9773.348Oryzias_latipes
ENSGMOG00000014954srl10091.850ENSORLG00000008291srl9393.112Oryzias_latipes
ENSGMOG00000014954srl10091.850ENSORLG00020019784srl8093.112Oryzias_latipes_hni
ENSGMOG00000014954srl10073.568ENSORLG00020018173SRL9773.568Oryzias_latipes_hni
ENSGMOG00000014954srl10073.568ENSORLG00015019063SRL9773.568Oryzias_latipes_hsok
ENSGMOG00000014954srl10091.410ENSORLG00015009342srl9191.410Oryzias_latipes_hsok
ENSGMOG00000014954srl10072.805ENSOMEG00000005682SRL5372.805Oryzias_melastigma
ENSGMOG00000014954srl10091.410ENSOMEG00000010006srl9789.357Oryzias_melastigma
ENSGMOG00000014954srl9979.691ENSOGAG00000029266SRL5479.691Otolemur_garnettii
ENSGMOG00000014954srl9981.015ENSOARG00000003074SRL5581.015Ovis_aries
ENSGMOG00000014954srl9981.678ENSPPAG00000024919-9982.086Pan_paniscus
ENSGMOG00000014954srl9980.795ENSPPRG00000010274SRL9981.406Panthera_pardus
ENSGMOG00000014954srl9980.795ENSPTIG00000015162SRL9981.406Panthera_tigris_altaica
ENSGMOG00000014954srl9981.678ENSPTRG00000007712SRL9982.086Pan_troglodytes
ENSGMOG00000014954srl9981.678ENSPANG00000013804SRL9581.678Papio_anubis
ENSGMOG00000014954srl9978.587ENSPKIG00000024974SRL8878.587Paramormyrops_kingsleyae
ENSGMOG00000014954srl9990.728ENSPKIG00000006405srl9390.728Paramormyrops_kingsleyae
ENSGMOG00000014954srl9974.614ENSPMGG00000023505-9974.614Periophthalmus_magnuspinnatus
ENSGMOG00000014954srl9990.728ENSPMGG00000021081srl9590.728Periophthalmus_magnuspinnatus
ENSGMOG00000014954srl9981.015ENSPEMG00000015842Srl9381.015Peromyscus_maniculatus_bairdii
ENSGMOG00000014954srl9567.048ENSPMAG00000004786srl9967.048Petromyzon_marinus
ENSGMOG00000014954srl9981.015ENSPCIG00000012128SRL9681.015Phascolarctos_cinereus
ENSGMOG00000014954srl10090.969ENSPFOG00000011408srl9490.969Poecilia_formosa
ENSGMOG00000014954srl10088.767ENSPLAG00000008017srl9688.767Poecilia_latipinna
ENSGMOG00000014954srl10075.110ENSPLAG00000002932SRL9875.110Poecilia_latipinna
ENSGMOG00000014954srl10088.767ENSPMEG00000006745srl9688.767Poecilia_mexicana
ENSGMOG00000014954srl10072.921ENSPMEG00000005890SRL5973.019Poecilia_mexicana
ENSGMOG00000014954srl10075.771ENSPREG00000000315SRL9875.771Poecilia_reticulata
ENSGMOG00000014954srl10091.189ENSPREG00000007751srl9888.987Poecilia_reticulata
ENSGMOG00000014954srl9583.023ENSPPYG00000007053SRL9783.023Pongo_abelii
ENSGMOG00000014954srl9981.236ENSPCAG00000003378-5081.236Procavia_capensis
ENSGMOG00000014954srl9980.353ENSPCOG00000023135SRL9980.952Propithecus_coquereli
ENSGMOG00000014954srl9981.457ENSPVAG00000006586SRL5481.457Pteropus_vampyrus
ENSGMOG00000014954srl10073.448ENSPNYG00000003423SRL5773.448Pundamilia_nyererei
ENSGMOG00000014954srl9992.053ENSPNYG00000001200srl9789.845Pundamilia_nyererei
ENSGMOG00000014954srl9990.508ENSPNAG00000023106srl9490.508Pygocentrus_nattereri
ENSGMOG00000014954srl9973.894ENSPNAG00000007361-9173.894Pygocentrus_nattereri
ENSGMOG00000014954srl9981.898ENSSBOG00000029273SRL9381.898Saimiri_boliviensis_boliviensis
ENSGMOG00000014954srl9990.066ENSSFOG00015009773srl9490.066Scleropages_formosus
ENSGMOG00000014954srl9974.893ENSSMAG00000002232SRL5074.893Scophthalmus_maximus
ENSGMOG00000014954srl10091.189ENSSMAG00000016274srl9788.987Scophthalmus_maximus
ENSGMOG00000014954srl10089.868ENSSDUG00000010808srl9789.868Seriola_dumerili
ENSGMOG00000014954srl9976.304ENSSDUG00000009161SRL9876.304Seriola_dumerili
ENSGMOG00000014954srl9976.068ENSSLDG00000014601SRL9976.180Seriola_lalandi_dorsalis
ENSGMOG00000014954srl10092.070ENSSLDG00000022024srl9492.070Seriola_lalandi_dorsalis
ENSGMOG00000014954srl10080.220ENSSPUG00000016859SRL9880.220Sphenodon_punctatus
ENSGMOG00000014954srl10092.731ENSSPAG00000019105srl9492.731Stegastes_partitus
ENSGMOG00000014954srl9975.885ENSSPAG00000014254SRL9875.885Stegastes_partitus
ENSGMOG00000014954srl9981.236ENSSSCG00000007949SRL9881.236Sus_scrofa
ENSGMOG00000014954srl9980.531ENSTGUG00000003951-9780.531Taeniopygia_guttata
ENSGMOG00000014954srl8086.188ENSTGUG00000016121-10086.188Taeniopygia_guttata
ENSGMOG00000014954srl10091.630ENSTRUG00000006005srl9491.630Takifugu_rubripes
ENSGMOG00000014954srl9576.047ENSTRUG00000013310SRL5576.047Takifugu_rubripes
ENSGMOG00000014954srl10089.868ENSTNIG00000009739srl9489.868Tetraodon_nigroviridis
ENSGMOG00000014954srl9981.015ENSUAMG00000005701SRL5581.015Ursus_americanus
ENSGMOG00000014954srl9981.015ENSUMAG00000002574SRL5481.015Ursus_maritimus
ENSGMOG00000014954srl10080.396ENSXETG00000017313srl9880.396Xenopus_tropicalis
ENSGMOG00000014954srl9590.278ENSXCOG00000010424srl9690.278Xiphophorus_couchianus
ENSGMOG00000014954srl10076.044ENSXCOG00000014584SRL9876.044Xiphophorus_couchianus
ENSGMOG00000014954srl10091.189ENSXMAG00000004625srl9091.189Xiphophorus_maculatus
ENSGMOG00000014954srl10073.662ENSXMAG00000027598SRL6273.662Xiphophorus_maculatus

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