EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSGMOG00000015143 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Gadus_morhua
Status: putative
Strand: Plus strand
Length: 4371 bases
Position: chrGeneScaffold_838:7671-12041
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSGMOP00000016230	zf-C2H2	PF00096.26	4.3e-37	1	7
ENSGMOP00000016230	zf-C2H2	PF00096.26	4.3e-37	2	7
ENSGMOP00000016230	zf-C2H2	PF00096.26	4.3e-37	3	7
ENSGMOP00000016230	zf-C2H2	PF00096.26	4.3e-37	4	7
ENSGMOP00000016230	zf-C2H2	PF00096.26	4.3e-37	5	7
ENSGMOP00000016230	zf-C2H2	PF00096.26	4.3e-37	6	7
ENSGMOP00000016230	zf-C2H2	PF00096.26	4.3e-37	7	7
ENSGMOP00000016230	zf-met	PF12874.7	2.2e-05	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSGMOT00000016645	-	2172	-	ENSGMOP00000016230	723 (aa)	-	UPI00023F3278

Gene Model

Click here to download ENSGMOG00000015143's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSGMOG00000015143's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSGMOG00000015143	-	64	45.872	ENSGMOG00000017526	-	94	45.872
ENSGMOG00000015143	-	51	39.264	ENSGMOG00000007737	gfi1ab	83	39.264
ENSGMOG00000015143	-	76	31.126	ENSGMOG00000009850	-	99	31.126
ENSGMOG00000015143	-	62	38.849	ENSGMOG00000004063	ZNF628	99	38.849
ENSGMOG00000015143	-	50	44.444	ENSGMOG00000015258	ZNF384	56	44.444
ENSGMOG00000015143	-	62	31.387	ENSGMOG00000007875	ZNF319	97	31.387
ENSGMOG00000015143	-	64	49.057	ENSGMOG00000020149	si:dkeyp-113d7.1	100	49.057
ENSGMOG00000015143	-	63	43.750	ENSGMOG00000003238	-	99	43.750
ENSGMOG00000015143	-	60	39.552	ENSGMOG00000000494	-	96	39.552
ENSGMOG00000015143	-	64	30.030	ENSGMOG00000017555	znf710b	85	34.356
ENSGMOG00000015143	-	62	43.243	ENSGMOG00000011409	e4f1	62	35.443
ENSGMOG00000015143	-	53	33.588	ENSGMOG00000012795	zbtb16a	57	33.588
ENSGMOG00000015143	-	63	32.459	ENSGMOG00000009187	ZNF626	76	32.459

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSGMOG00000015143	-	100	50.197	ENSTNIG00000014443	prdm9	100	50.197	Tetraodon_nigroviridis