EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSGMOG00000015174 (Gene tree)
Gene ID: -
Gene Symbol: si:dkey-16l2.16
Alias: -
Full Name: si:dkey-16l2.16
Gene Type: protein_coding
Species: Gadus_morhua
Status: putative
Strand: Plus strand
Length: 4076 bases
Position: chrGeneScaffold_4624:38513-42588
Accession: ZDB-GENE-141219-36
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSGMOP00000016238	MMR_HSR1	PF01926.23	2.4e-07	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSGMOT00000016653	-	492	-	ENSGMOP00000016238	164 (aa)	-	UPI00023F331E

Gene Model

Click here to download ENSGMOG00000015174's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSGMOG00000015174's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSGMOG00000015174	si:dkey-16l2.16	93	42.581	ENSGMOG00000010808	RAB39B	72	42.581
ENSGMOG00000015174	si:dkey-16l2.16	99	43.636	ENSGMOG00000007390	rab11ba	75	43.636
ENSGMOG00000015174	si:dkey-16l2.16	97	45.625	ENSGMOG00000003610	rab15	75	45.625
ENSGMOG00000015174	si:dkey-16l2.16	66	43.519	ENSGMOG00000006968	-	53	43.519
ENSGMOG00000015174	si:dkey-16l2.16	96	42.767	ENSGMOG00000016277	RAB15	75	42.767
ENSGMOG00000015174	si:dkey-16l2.16	93	34.641	ENSGMOG00000004095	rab41	72	34.641
ENSGMOG00000015174	si:dkey-16l2.16	95	43.210	ENSGMOG00000004096	-	73	43.210
ENSGMOG00000015174	si:dkey-16l2.16	98	45.062	ENSGMOG00000002552	rab30	79	45.062
ENSGMOG00000015174	si:dkey-16l2.16	93	40.000	ENSGMOG00000011766	-	98	40.000
ENSGMOG00000015174	si:dkey-16l2.16	64	40.952	ENSGMOG00000020148	-	54	40.952
ENSGMOG00000015174	si:dkey-16l2.16	92	35.256	ENSGMOG00000020144	rab9a	76	35.256
ENSGMOG00000015174	si:dkey-16l2.16	68	40.164	ENSGMOG00000018741	-	57	40.164
ENSGMOG00000015174	si:dkey-16l2.16	85	30.714	ENSGMOG00000005102	rab23	68	30.435
ENSGMOG00000015174	si:dkey-16l2.16	95	55.901	ENSGMOG00000010022	-	77	55.901
ENSGMOG00000015174	si:dkey-16l2.16	90	42.953	ENSGMOG00000006450	rab11al	73	42.953
ENSGMOG00000015174	si:dkey-16l2.16	93	40.909	ENSGMOG00000001834	rab4b	74	40.909
ENSGMOG00000015174	si:dkey-16l2.16	99	38.415	ENSGMOG00000012335	rab12	69	38.415
ENSGMOG00000015174	si:dkey-16l2.16	93	41.772	ENSGMOG00000006175	rab33a	67	41.772
ENSGMOG00000015174	si:dkey-16l2.16	93	42.308	ENSGMOG00000011665	zgc:101559	73	42.308
ENSGMOG00000015174	si:dkey-16l2.16	93	39.869	ENSGMOG00000002868	rab5aa	70	39.869
ENSGMOG00000015174	si:dkey-16l2.16	93	34.810	ENSGMOG00000007712	RAB7A	75	34.810
ENSGMOG00000015174	si:dkey-16l2.16	95	58.333	ENSGMOG00000004888	rab1ab	78	58.333
ENSGMOG00000015174	si:dkey-16l2.16	58	38.947	ENSGMOG00000012623	si:ch73-116o1.2	58	37.500
ENSGMOG00000015174	si:dkey-16l2.16	98	41.250	ENSGMOG00000000532	-	74	41.250
ENSGMOG00000015174	si:dkey-16l2.16	93	30.323	ENSGMOG00000017644	si:ch211-247i17.1	88	30.323
ENSGMOG00000015174	si:dkey-16l2.16	93	38.562	ENSGMOG00000015096	rab5c	69	38.562
ENSGMOG00000015174	si:dkey-16l2.16	100	36.527	ENSGMOG00000001876	-	96	36.527
ENSGMOG00000015174	si:dkey-16l2.16	60	33.028	ENSGMOG00000015683	arfrp1	52	33.028
ENSGMOG00000015174	si:dkey-16l2.16	65	44.444	ENSGMOG00000014481	rab36	56	44.444
ENSGMOG00000015174	si:dkey-16l2.16	97	72.327	ENSGMOG00000017688	rab35b	79	72.327
ENSGMOG00000015174	si:dkey-16l2.16	62	32.673	ENSGMOG00000011008	arl2	52	32.673
ENSGMOG00000015174	si:dkey-16l2.16	60	31.633	ENSGMOG00000001544	arl3	51	31.633
ENSGMOG00000015174	si:dkey-16l2.16	97	34.545	ENSGMOG00000020194	rab9b	79	34.545
ENSGMOG00000015174	si:dkey-16l2.16	95	40.385	ENSGMOG00000003577	-	78	40.385
ENSGMOG00000015174	si:dkey-16l2.16	91	44.444	ENSGMOG00000000885	rab33ba	72	44.444
ENSGMOG00000015174	si:dkey-16l2.16	92	42.581	ENSGMOG00000008450	-	72	42.581
ENSGMOG00000015174	si:dkey-16l2.16	96	43.671	ENSGMOG00000009668	-	72	43.671
ENSGMOG00000015174	si:dkey-16l2.16	94	57.419	ENSGMOG00000004979	-	72	57.419
ENSGMOG00000015174	si:dkey-16l2.16	95	38.462	ENSGMOG00000006444	rab25b	92	38.462
ENSGMOG00000015174	si:dkey-16l2.16	93	37.255	ENSGMOG00000013070	rab22a	78	37.255
ENSGMOG00000015174	si:dkey-16l2.16	62	44.118	ENSGMOG00000018475	RAB29	61	44.118
ENSGMOG00000015174	si:dkey-16l2.16	66	41.284	ENSGMOG00000007140	rab34b	52	41.284
ENSGMOG00000015174	si:dkey-16l2.16	93	34.810	ENSGMOG00000011308	-	76	34.810
ENSGMOG00000015174	si:dkey-16l2.16	96	56.962	ENSGMOG00000007293	rab1ba	77	56.962
ENSGMOG00000015174	si:dkey-16l2.16	98	44.512	ENSGMOG00000008355	rab11a	75	44.512
ENSGMOG00000015174	si:dkey-16l2.16	93	30.921	ENSGMOG00000010196	hrasb	81	30.921
ENSGMOG00000015174	si:dkey-16l2.16	93	41.176	ENSGMOG00000007127	RAB5A	83	41.176
ENSGMOG00000015174	si:dkey-16l2.16	64	30.631	ENSGMOG00000007850	arf2b	57	30.631
ENSGMOG00000015174	si:dkey-16l2.16	96	43.671	ENSGMOG00000009211	rab11bb	72	43.671

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSGMOG00000015174	si:dkey-16l2.16	98	85.714	ENSAPOG00000008263	si:dkey-16l2.16	77	85.714	Acanthochromis_polyacanthus
ENSGMOG00000015174	si:dkey-16l2.16	98	86.335	ENSAOCG00000016825	si:dkey-16l2.16	77	86.335	Amphiprion_ocellaris
ENSGMOG00000015174	si:dkey-16l2.16	98	86.335	ENSAPEG00000006500	si:dkey-16l2.16	77	86.335	Amphiprion_percula
ENSGMOG00000015174	si:dkey-16l2.16	98	85.093	ENSATEG00000019238	si:dkey-16l2.16	77	85.093	Anabas_testudineus
ENSGMOG00000015174	si:dkey-16l2.16	98	85.714	ENSACLG00000018721	si:dkey-16l2.16	77	85.714	Astatotilapia_calliptera
ENSGMOG00000015174	si:dkey-16l2.16	99	85.185	ENSAMXG00000038243	si:dkey-16l2.16	94	96.639	Astyanax_mexicanus
ENSGMOG00000015174	si:dkey-16l2.16	73	94.958	ENSCSEG00000009988	si:dkey-16l2.16	90	94.958	Cynoglossus_semilaevis
ENSGMOG00000015174	si:dkey-16l2.16	98	83.851	ENSCVAG00000003537	si:dkey-16l2.16	77	83.851	Cyprinodon_variegatus
ENSGMOG00000015174	si:dkey-16l2.16	98	84.472	ENSDARG00000037967	si:dkey-16l2.16	99	95.798	Danio_rerio
ENSGMOG00000015174	si:dkey-16l2.16	97	85.535	ENSELUG00000023247	si:dkey-16l2.16	76	85.535	Esox_lucius
ENSGMOG00000015174	si:dkey-16l2.16	73	93.277	ENSFHEG00000000767	si:dkey-16l2.16	76	93.277	Fundulus_heteroclitus
ENSGMOG00000015174	si:dkey-16l2.16	98	83.230	ENSGAFG00000005388	si:dkey-16l2.16	77	83.230	Gambusia_affinis
ENSGMOG00000015174	si:dkey-16l2.16	99	84.568	ENSGACG00000014915	si:dkey-16l2.16	75	83.951	Gasterosteus_aculeatus
ENSGMOG00000015174	si:dkey-16l2.16	98	85.714	ENSHBUG00000019261	si:dkey-16l2.16	77	85.714	Haplochromis_burtoni
ENSGMOG00000015174	si:dkey-16l2.16	98	83.230	ENSHCOG00000006538	si:dkey-16l2.16	77	83.230	Hippocampus_comes
ENSGMOG00000015174	si:dkey-16l2.16	98	80.745	ENSKMAG00000003494	si:dkey-16l2.16	76	80.745	Kryptolebias_marmoratus
ENSGMOG00000015174	si:dkey-16l2.16	98	85.093	ENSLBEG00000007681	si:dkey-16l2.16	77	85.093	Labrus_bergylta
ENSGMOG00000015174	si:dkey-16l2.16	98	83.851	ENSMAMG00000019230	si:dkey-16l2.16	77	83.851	Mastacembelus_armatus
ENSGMOG00000015174	si:dkey-16l2.16	98	85.714	ENSMZEG00005002081	si:dkey-16l2.16	77	85.714	Maylandia_zebra
ENSGMOG00000015174	si:dkey-16l2.16	100	82.317	ENSMMOG00000020140	si:dkey-16l2.16	77	82.317	Mola_mola
ENSGMOG00000015174	si:dkey-16l2.16	99	82.716	ENSMALG00000014727	si:dkey-16l2.16	76	82.716	Monopterus_albus
ENSGMOG00000015174	si:dkey-16l2.16	98	85.093	ENSNBRG00000008930	si:dkey-16l2.16	77	85.093	Neolamprologus_brichardi
ENSGMOG00000015174	si:dkey-16l2.16	98	85.714	ENSONIG00000009443	si:dkey-16l2.16	77	85.714	Oreochromis_niloticus
ENSGMOG00000015174	si:dkey-16l2.16	99	81.481	ENSORLG00000001098	si:dkey-16l2.16	77	81.481	Oryzias_latipes
ENSGMOG00000015174	si:dkey-16l2.16	99	81.481	ENSORLG00020000867	si:dkey-16l2.16	77	81.481	Oryzias_latipes_hni
ENSGMOG00000015174	si:dkey-16l2.16	98	82.609	ENSOMEG00000015474	si:dkey-16l2.16	77	82.609	Oryzias_melastigma
ENSGMOG00000015174	si:dkey-16l2.16	98	79.503	ENSPKIG00000018888	si:dkey-16l2.16	77	79.503	Paramormyrops_kingsleyae
ENSGMOG00000015174	si:dkey-16l2.16	98	84.472	ENSPKIG00000005686	-	77	84.472	Paramormyrops_kingsleyae
ENSGMOG00000015174	si:dkey-16l2.16	98	84.472	ENSPMGG00000000751	si:dkey-16l2.16	77	84.472	Periophthalmus_magnuspinnatus
ENSGMOG00000015174	si:dkey-16l2.16	98	84.472	ENSPFOG00000004746	si:dkey-16l2.16	77	84.472	Poecilia_formosa
ENSGMOG00000015174	si:dkey-16l2.16	98	83.851	ENSPLAG00000021043	si:dkey-16l2.16	77	83.851	Poecilia_latipinna
ENSGMOG00000015174	si:dkey-16l2.16	98	84.472	ENSPMEG00000007165	si:dkey-16l2.16	77	84.472	Poecilia_mexicana
ENSGMOG00000015174	si:dkey-16l2.16	98	83.851	ENSPREG00000005323	si:dkey-16l2.16	77	83.851	Poecilia_reticulata
ENSGMOG00000015174	si:dkey-16l2.16	98	85.714	ENSPNYG00000009490	si:dkey-16l2.16	77	85.714	Pundamilia_nyererei
ENSGMOG00000015174	si:dkey-16l2.16	98	85.093	ENSPNAG00000018986	si:dkey-16l2.16	77	85.093	Pygocentrus_nattereri
ENSGMOG00000015174	si:dkey-16l2.16	99	75.460	ENSSFOG00015006414	-	81	75.776	Scleropages_formosus
ENSGMOG00000015174	si:dkey-16l2.16	98	84.472	ENSSFOG00015021448	-	77	84.472	Scleropages_formosus
ENSGMOG00000015174	si:dkey-16l2.16	99	82.099	ENSSMAG00000011769	si:dkey-16l2.16	72	82.099	Scophthalmus_maximus
ENSGMOG00000015174	si:dkey-16l2.16	98	84.472	ENSSDUG00000005719	si:dkey-16l2.16	77	84.472	Seriola_dumerili
ENSGMOG00000015174	si:dkey-16l2.16	98	84.472	ENSSLDG00000003631	si:dkey-16l2.16	77	84.472	Seriola_lalandi_dorsalis
ENSGMOG00000015174	si:dkey-16l2.16	98	85.714	ENSSPAG00000006302	si:dkey-16l2.16	77	85.714	Stegastes_partitus
ENSGMOG00000015174	si:dkey-16l2.16	98	84.472	ENSTRUG00000025076	si:dkey-16l2.16	94	95.798	Takifugu_rubripes
ENSGMOG00000015174	si:dkey-16l2.16	98	83.851	ENSTNIG00000011300	si:dkey-16l2.16	77	83.851	Tetraodon_nigroviridis
ENSGMOG00000015174	si:dkey-16l2.16	98	83.851	ENSXMAG00000021767	si:dkey-16l2.16	77	83.851	Xiphophorus_maculatus