EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSGMOG00000015188 (Gene tree)
Gene ID: -
Gene Symbol: scaf4a
Alias: fa96d07|si:dkey-50p8.3|wu:fa96d07
Full Name: SR-related CTD-associated factor 4a
Gene Type: protein_coding
Species: Gadus_morhua
Status: putative
Strand: Plus strand
Length: 11890 bases
Position: chrGeneScaffold_4407:215954-227843
Accession: ZDB-GENE-030131-9003
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSGMOP00000016323	RRM_1	PF00076.22	4.6e-07	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSGMOT00000016739	-	2634	-	ENSGMOP00000016323	878 (aa)	-	UPI00023F332C

Gene Model

Click here to download ENSGMOG00000015188's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSGMOG00000015188's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSGMOG00000015188	scaf4a	55	59.245	ENSAPOG00000019615	scaf4b	56	67.665	Acanthochromis_polyacanthus
ENSGMOG00000015188	scaf4a	55	61.240	ENSAOCG00000010433	scaf4b	56	68.263	Amphiprion_ocellaris
ENSGMOG00000015188	scaf4a	55	59.623	ENSAPEG00000010913	scaf4b	56	68.862	Amphiprion_percula
ENSGMOG00000015188	scaf4a	54	58.367	ENSATEG00000011758	scaf4b	72	50.967	Anabas_testudineus
ENSGMOG00000015188	scaf4a	60	56.780	ENSACLG00000024833	scaf4b	57	66.443	Astatotilapia_calliptera
ENSGMOG00000015188	scaf4a	61	52.252	ENSCSEG00000012808	-	74	51.256	Cynoglossus_semilaevis
ENSGMOG00000015188	scaf4a	54	59.690	ENSCVAG00000009142	scaf4b	52	71.429	Cyprinodon_variegatus
ENSGMOG00000015188	scaf4a	53	79.167	ENSELUG00000009909	scaf4a	58	79.695	Esox_lucius
ENSGMOG00000015188	scaf4a	58	48.800	ENSELUG00000002779	SCAF8	66	56.376	Esox_lucius
ENSGMOG00000015188	scaf4a	80	58.971	ENSFHEG00000017866	scaf4a	61	60.211	Fundulus_heteroclitus
ENSGMOG00000015188	scaf4a	54	58.687	ENSFHEG00000007634	scaf4b	53	68.707	Fundulus_heteroclitus
ENSGMOG00000015188	scaf4a	80	58.032	ENSGACG00000020580	scaf4a	81	60.945	Gasterosteus_aculeatus
ENSGMOG00000015188	scaf4a	54	59.657	ENSGGOG00000015557	SCAF4	53	63.028	Gorilla_gorilla
ENSGMOG00000015188	scaf4a	64	56.364	ENSIPUG00000011285	scaf4	76	55.137	Ictalurus_punctatus
ENSGMOG00000015188	scaf4a	51	59.434	ENSKMAG00000005742	scaf4b	52	69.930	Kryptolebias_marmoratus
ENSGMOG00000015188	scaf4a	77	62.238	ENSLBEG00000014675	scaf4a	65	62.953	Labrus_bergylta
ENSGMOG00000015188	scaf4a	55	70.588	ENSMALG00000013825	scaf4a	54	71.311	Monopterus_albus
ENSGMOG00000015188	scaf4a	66	68.132	ENSONIG00000004687	scaf4a	72	61.757	Oreochromis_niloticus
ENSGMOG00000015188	scaf4a	58	55.947	ENSORLG00000003420	scaf4b	57	66.071	Oryzias_latipes
ENSGMOG00000015188	scaf4a	58	56.388	ENSORLG00020013853	scaf4b	57	66.667	Oryzias_latipes_hni
ENSGMOG00000015188	scaf4a	56	63.485	ENSPMGG00000016741	scaf4a	54	54.682	Periophthalmus_magnuspinnatus
ENSGMOG00000015188	scaf4a	55	57.198	ENSPLAG00000004403	-	52	65.101	Poecilia_latipinna
ENSGMOG00000015188	scaf4a	55	58.140	ENSPMEG00000006666	-	52	66.443	Poecilia_mexicana
ENSGMOG00000015188	scaf4a	55	57.977	ENSPREG00000013510	scaf4b	52	66.443	Poecilia_reticulata
ENSGMOG00000015188	scaf4a	60	56.780	ENSPNYG00000010526	scaf4b	57	66.443	Pundamilia_nyererei
ENSGMOG00000015188	scaf4a	62	54.264	ENSSMAG00000003738	scaf4b	63	69.512	Scophthalmus_maximus
ENSGMOG00000015188	scaf4a	80	64.555	ENSSMAG00000017901	scaf4a	63	64.966	Scophthalmus_maximus
ENSGMOG00000015188	scaf4a	58	57.078	ENSSDUG00000012380	scaf4b	63	67.066	Seriola_dumerili
ENSGMOG00000015188	scaf4a	80	63.648	ENSSDUG00000012918	scaf4a	64	64.807	Seriola_dumerili
ENSGMOG00000015188	scaf4a	58	57.078	ENSSLDG00000023152	-	63	67.066	Seriola_lalandi_dorsalis
ENSGMOG00000015188	scaf4a	80	63.722	ENSSLDG00000021671	scaf4a	64	64.980	Seriola_lalandi_dorsalis
ENSGMOG00000015188	scaf4a	73	63.899	ENSXETG00000007351	scaf4	52	64.621	Xenopus_tropicalis