EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSGMOG00000015352 (Gene tree)
Gene ID: -
Gene Symbol: slbp
Alias: cb157|sb:cb157|si:dkey-102m7.2
Full Name: stem-loop binding protein
Gene Type: protein_coding
Species: Gadus_morhua
Status: putative
Strand: Plus strand
Length: 1069 bases
Position: chrscaffold06362:108634-109702
Accession: ZDB-GENE-030131-9686
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSGMOP00000016433	SLBP_RNA_bind	PF15247.6	1.6e-29	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSGMOT00000016849	-	471	-	ENSGMOP00000016433	157 (aa)	-	UPI00023F35E6

Gene Model

Click here to download ENSGMOG00000015352's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSGMOG00000015352's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSGMOG00000015352	slbp	96	72.667	ENSG00000163950	SLBP	63	72.667	Homo_sapiens
ENSGMOG00000015352	slbp	99	72.785	ENSAPOG00000004953	slbp	54	73.548	Acanthochromis_polyacanthus
ENSGMOG00000015352	slbp	96	71.333	ENSAMEG00000016915	SLBP	67	71.333	Ailuropoda_melanoleuca
ENSGMOG00000015352	slbp	100	73.750	ENSACIG00000022308	slbp	59	75.159	Amphilophus_citrinellus
ENSGMOG00000015352	slbp	100	71.875	ENSAOCG00000024545	slbp	55	72.611	Amphiprion_ocellaris
ENSGMOG00000015352	slbp	100	71.875	ENSAPEG00000017629	slbp	55	72.611	Amphiprion_percula
ENSGMOG00000015352	slbp	100	73.750	ENSATEG00000016358	slbp	54	74.522	Anabas_testudineus
ENSGMOG00000015352	slbp	96	60.131	ENSAPLG00000015989	-	67	69.737	Anas_platyrhynchos
ENSGMOG00000015352	slbp	96	72.667	ENSANAG00000034769	SLBP	63	72.667	Aotus_nancymaae
ENSGMOG00000015352	slbp	99	72.436	ENSACLG00000007036	-	55	75.641	Astatotilapia_calliptera
ENSGMOG00000015352	slbp	97	72.549	ENSAMXG00000014527	slbp	55	71.895	Astyanax_mexicanus
ENSGMOG00000015352	slbp	96	71.333	ENSBTAG00000001328	SLBP	53	71.333	Bos_taurus
ENSGMOG00000015352	slbp	96	71.333	ENSCJAG00000001790	SLBP	55	68.153	Callithrix_jacchus
ENSGMOG00000015352	slbp	96	70.667	ENSCAFG00000015016	SLBP	53	70.667	Canis_familiaris
ENSGMOG00000015352	slbp	96	70.667	ENSCAFG00020012334	SLBP	53	70.667	Canis_lupus_dingo
ENSGMOG00000015352	slbp	96	71.333	ENSCHIG00000019364	SLBP	55	71.333	Capra_hircus
ENSGMOG00000015352	slbp	96	72.000	ENSTSYG00000000376	SLBP	63	72.000	Carlito_syrichta
ENSGMOG00000015352	slbp	71	74.775	ENSCAPG00000016340	SLBP	60	74.775	Cavia_aperea
ENSGMOG00000015352	slbp	96	71.333	ENSCPOG00000000031	SLBP	53	71.333	Cavia_porcellus
ENSGMOG00000015352	slbp	96	72.667	ENSCATG00000029173	SLBP	63	72.667	Cercocebus_atys
ENSGMOG00000015352	slbp	96	71.333	ENSCLAG00000008157	SLBP	54	71.333	Chinchilla_lanigera
ENSGMOG00000015352	slbp	97	69.079	ENSCPBG00000000746	SLBP	52	69.079	Chrysemys_picta_bellii
ENSGMOG00000015352	slbp	96	72.000	ENSCANG00000041008	SLBP	69	72.000	Colobus_angolensis_palliatus
ENSGMOG00000015352	slbp	96	71.333	ENSCGRG00001009760	-	53	71.333	Cricetulus_griseus_chok1gshd
ENSGMOG00000015352	slbp	96	70.667	ENSCGRG00001012991	-	54	70.667	Cricetulus_griseus_chok1gshd
ENSGMOG00000015352	slbp	96	71.333	ENSCGRG00000004506	Slbp	53	71.333	Cricetulus_griseus_crigri
ENSGMOG00000015352	slbp	100	73.750	ENSCSEG00000020337	-	56	74.522	Cynoglossus_semilaevis
ENSGMOG00000015352	slbp	100	71.875	ENSCVAG00000019592	-	58	72.611	Cyprinodon_variegatus
ENSGMOG00000015352	slbp	96	67.308	ENSDARG00000100558	slbp	50	64.103	Danio_rerio
ENSGMOG00000015352	slbp	96	70.667	ENSDNOG00000047539	SLBP	52	70.667	Dasypus_novemcinctus
ENSGMOG00000015352	slbp	100	63.057	ENSDORG00000003028	Slbp	93	68.153	Dipodomys_ordii
ENSGMOG00000015352	slbp	96	65.563	ENSETEG00000004641	SLBP	62	70.000	Echinops_telfairi
ENSGMOG00000015352	slbp	75	76.271	ENSEASG00005022714	SLBP	61	76.271	Equus_asinus_asinus
ENSGMOG00000015352	slbp	100	71.779	ENSELUG00000012854	slbp	56	71.779	Esox_lucius
ENSGMOG00000015352	slbp	96	71.333	ENSFCAG00000000169	SLBP	61	71.333	Felis_catus
ENSGMOG00000015352	slbp	96	63.333	ENSFALG00000010003	-	52	70.000	Ficedula_albicollis
ENSGMOG00000015352	slbp	96	72.000	ENSFDAG00000007592	SLBP	57	72.000	Fukomys_damarensis
ENSGMOG00000015352	slbp	99	71.069	ENSFHEG00000007497	slbp	58	73.548	Fundulus_heteroclitus
ENSGMOG00000015352	slbp	96	70.000	ENSGALG00000015712	SLBP	52	70.000	Gallus_gallus
ENSGMOG00000015352	slbp	100	72.500	ENSGAFG00000019577	slbp	60	73.248	Gambusia_affinis
ENSGMOG00000015352	slbp	100	71.250	ENSGACG00000019596	slbp	63	72.611	Gasterosteus_aculeatus
ENSGMOG00000015352	slbp	97	69.079	ENSGAGG00000012096	SLBP	59	69.079	Gopherus_agassizii
ENSGMOG00000015352	slbp	96	72.667	ENSGGOG00000003167	SLBP	63	72.667	Gorilla_gorilla
ENSGMOG00000015352	slbp	99	74.843	ENSHBUG00000003338	-	55	75.641	Haplochromis_burtoni
ENSGMOG00000015352	slbp	73	77.193	ENSHGLG00000005955	-	59	77.193	Heterocephalus_glaber_female
ENSGMOG00000015352	slbp	96	64.000	ENSHGLG00000010461	-	54	59.333	Heterocephalus_glaber_female
ENSGMOG00000015352	slbp	96	61.333	ENSHGLG00000008313	-	51	58.667	Heterocephalus_glaber_female
ENSGMOG00000015352	slbp	96	62.667	ENSHGLG00100010510	-	51	60.000	Heterocephalus_glaber_male
ENSGMOG00000015352	slbp	96	72.667	ENSHGLG00100014018	-	72	72.667	Heterocephalus_glaber_male
ENSGMOG00000015352	slbp	96	64.000	ENSHGLG00100014906	-	54	59.333	Heterocephalus_glaber_male
ENSGMOG00000015352	slbp	97	74.342	ENSHCOG00000013425	slbp	55	74.342	Hippocampus_comes
ENSGMOG00000015352	slbp	97	66.013	ENSIPUG00000016780	slbp	57	66.013	Ictalurus_punctatus
ENSGMOG00000015352	slbp	96	71.333	ENSSTOG00000003262	SLBP	53	71.333	Ictidomys_tridecemlineatus
ENSGMOG00000015352	slbp	97	71.053	ENSJJAG00000020549	-	53	71.053	Jaculus_jaculus
ENSGMOG00000015352	slbp	97	71.053	ENSJJAG00000002394	-	54	71.053	Jaculus_jaculus
ENSGMOG00000015352	slbp	96	73.377	ENSKMAG00000008187	slbp	57	72.671	Kryptolebias_marmoratus
ENSGMOG00000015352	slbp	99	72.152	ENSLBEG00000024709	slbp	55	73.548	Labrus_bergylta
ENSGMOG00000015352	slbp	93	66.438	ENSLACG00000014623	SLBP	54	63.226	Latimeria_chalumnae
ENSGMOG00000015352	slbp	100	71.779	ENSLOCG00000011027	slbp	53	71.779	Lepisosteus_oculatus
ENSGMOG00000015352	slbp	96	72.000	ENSLAFG00000012933	SLBP	62	72.000	Loxodonta_africana
ENSGMOG00000015352	slbp	96	72.667	ENSMMUG00000032303	SLBP	66	72.667	Macaca_mulatta
ENSGMOG00000015352	slbp	96	72.667	ENSMLEG00000024639	SLBP	59	72.667	Mandrillus_leucophaeus
ENSGMOG00000015352	slbp	100	69.375	ENSMAMG00000001046	-	55	70.064	Mastacembelus_armatus
ENSGMOG00000015352	slbp	99	74.843	ENSMZEG00005017261	-	55	75.641	Maylandia_zebra
ENSGMOG00000015352	slbp	96	70.000	ENSMGAG00000013085	SLBP	67	70.000	Meleagris_gallopavo
ENSGMOG00000015352	slbp	96	71.333	ENSMAUG00000009490	Slbp	53	71.333	Mesocricetus_auratus
ENSGMOG00000015352	slbp	96	72.000	ENSMICG00000014244	SLBP	63	72.000	Microcebus_murinus
ENSGMOG00000015352	slbp	96	71.333	ENSMOCG00000015826	Slbp	68	71.333	Microtus_ochrogaster
ENSGMOG00000015352	slbp	96	72.258	ENSMMOG00000010181	slbp	63	73.684	Mola_mola
ENSGMOG00000015352	slbp	96	72.000	ENSMODG00000004304	SLBP	56	72.000	Monodelphis_domestica
ENSGMOG00000015352	slbp	96	71.333	MGP_CAROLIEiJ_G0027117	Slbp	66	71.333	Mus_caroli
ENSGMOG00000015352	slbp	96	71.333	ENSMUSG00000004642	Slbp	66	71.333	Mus_musculus
ENSGMOG00000015352	slbp	96	71.333	MGP_PahariEiJ_G0016901	Slbp	66	71.333	Mus_pahari
ENSGMOG00000015352	slbp	96	71.333	MGP_SPRETEiJ_G0028113	Slbp	66	71.333	Mus_spretus
ENSGMOG00000015352	slbp	71	77.679	ENSMPUG00000011139	SLBP	57	77.679	Mustela_putorius_furo
ENSGMOG00000015352	slbp	96	67.333	ENSMLUG00000004425	SLBP	62	67.333	Myotis_lucifugus
ENSGMOG00000015352	slbp	96	70.000	ENSNGAG00000020799	Slbp	53	70.000	Nannospalax_galili
ENSGMOG00000015352	slbp	99	76.282	ENSNBRG00000006044	-	58	76.282	Neolamprologus_brichardi
ENSGMOG00000015352	slbp	96	72.667	ENSNLEG00000000048	SLBP	63	72.667	Nomascus_leucogenys
ENSGMOG00000015352	slbp	95	72.483	ENSMEUG00000002501	SLBP	81	72.483	Notamacropus_eugenii
ENSGMOG00000015352	slbp	96	72.667	ENSODEG00000012641	SLBP	55	72.667	Octodon_degus
ENSGMOG00000015352	slbp	99	74.214	ENSONIG00000017469	-	55	75.000	Oreochromis_niloticus
ENSGMOG00000015352	slbp	99	70.968	ENSOANG00000014243	SLBP	65	70.968	Ornithorhynchus_anatinus
ENSGMOG00000015352	slbp	98	68.153	ENSORLG00000024887	-	56	70.130	Oryzias_latipes
ENSGMOG00000015352	slbp	98	68.153	ENSORLG00020007798	slbp	58	70.130	Oryzias_latipes_hni
ENSGMOG00000015352	slbp	96	69.281	ENSORLG00015016656	slbp	56	71.333	Oryzias_latipes_hsok
ENSGMOG00000015352	slbp	98	69.481	ENSOMEG00000010818	slbp	58	69.481	Oryzias_melastigma
ENSGMOG00000015352	slbp	96	72.667	ENSOGAG00000009750	SLBP	54	72.667	Otolemur_garnettii
ENSGMOG00000015352	slbp	96	71.333	ENSOARG00000016090	SLBP	67	71.333	Ovis_aries
ENSGMOG00000015352	slbp	96	72.667	ENSPPAG00000033300	SLBP	63	72.667	Pan_paniscus
ENSGMOG00000015352	slbp	96	71.333	ENSPPRG00000016897	SLBP	58	71.333	Panthera_pardus
ENSGMOG00000015352	slbp	75	76.271	ENSPTIG00000015057	SLBP	61	76.271	Panthera_tigris_altaica
ENSGMOG00000015352	slbp	96	72.667	ENSPTRG00000015832	SLBP	63	72.667	Pan_troglodytes
ENSGMOG00000015352	slbp	96	72.667	ENSPANG00000004932	SLBP	63	72.667	Papio_anubis
ENSGMOG00000015352	slbp	100	74.847	ENSPKIG00000006183	slbp	55	74.847	Paramormyrops_kingsleyae
ENSGMOG00000015352	slbp	100	70.625	ENSPMGG00000017684	-	76	69.032	Periophthalmus_magnuspinnatus
ENSGMOG00000015352	slbp	96	71.333	ENSPEMG00000018369	Slbp	53	71.333	Peromyscus_maniculatus_bairdii
ENSGMOG00000015352	slbp	58	68.132	ENSPMAG00000003029	SLBP	76	71.765	Petromyzon_marinus
ENSGMOG00000015352	slbp	100	72.500	ENSPFOG00000000462	slbp	57	73.248	Poecilia_formosa
ENSGMOG00000015352	slbp	100	73.248	ENSPLAG00000008300	slbp	59	73.248	Poecilia_latipinna
ENSGMOG00000015352	slbp	100	72.500	ENSPMEG00000020807	slbp	57	73.248	Poecilia_mexicana
ENSGMOG00000015352	slbp	100	72.500	ENSPREG00000004561	slbp	57	73.248	Poecilia_reticulata
ENSGMOG00000015352	slbp	96	72.667	ENSPPYG00000014529	SLBP	54	72.667	Pongo_abelii
ENSGMOG00000015352	slbp	96	72.000	ENSPCOG00000017399	SLBP	63	72.000	Propithecus_coquereli
ENSGMOG00000015352	slbp	96	70.000	ENSPVAG00000002807	SLBP	56	70.000	Pteropus_vampyrus
ENSGMOG00000015352	slbp	99	74.843	ENSPNYG00000005451	-	55	75.641	Pundamilia_nyererei
ENSGMOG00000015352	slbp	97	71.242	ENSPNAG00000018503	slbp	56	70.588	Pygocentrus_nattereri
ENSGMOG00000015352	slbp	96	71.333	ENSRNOG00000037162	Slbp	53	71.333	Rattus_norvegicus
ENSGMOG00000015352	slbp	96	72.667	ENSRBIG00000039159	SLBP	63	72.667	Rhinopithecus_bieti
ENSGMOG00000015352	slbp	96	72.667	ENSRROG00000030081	SLBP	52	78.571	Rhinopithecus_roxellana
ENSGMOG00000015352	slbp	75	77.119	ENSSBOG00000033897	SLBP	63	77.119	Saimiri_boliviensis_boliviensis
ENSGMOG00000015352	slbp	100	71.779	ENSSFOG00015019429	slbp	57	71.779	Scleropages_formosus
ENSGMOG00000015352	slbp	100	70.000	ENSSMAG00000016028	-	54	70.701	Scophthalmus_maximus
ENSGMOG00000015352	slbp	100	73.125	ENSSDUG00000000855	-	56	73.885	Seriola_dumerili
ENSGMOG00000015352	slbp	68	69.725	ENSSLDG00000022893	-	61	70.755	Seriola_lalandi_dorsalis
ENSGMOG00000015352	slbp	96	67.333	ENSSPUG00000016007	SLBP	55	67.333	Sphenodon_punctatus
ENSGMOG00000015352	slbp	100	72.500	ENSSPAG00000004021	slbp	60	73.248	Stegastes_partitus
ENSGMOG00000015352	slbp	96	70.000	ENSSSCG00000008676	SLBP	53	70.000	Sus_scrofa
ENSGMOG00000015352	slbp	95	68.456	ENSTGUG00000010626	-	55	68.667	Taeniopygia_guttata
ENSGMOG00000015352	slbp	99	72.500	ENSTRUG00000000688	slbp	56	73.248	Takifugu_rubripes
ENSGMOG00000015352	slbp	92	71.812	ENSTNIG00000000484	-	61	72.603	Tetraodon_nigroviridis
ENSGMOG00000015352	slbp	96	40.667	ENSTBEG00000004085	SLBP	58	40.667	Tupaia_belangeri
ENSGMOG00000015352	slbp	96	72.000	ENSTTRG00000010901	-	67	72.000	Tursiops_truncatus
ENSGMOG00000015352	slbp	96	66.000	ENSTTRG00000004010	-	81	66.000	Tursiops_truncatus
ENSGMOG00000015352	slbp	96	71.333	ENSUAMG00000012990	SLBP	52	71.333	Ursus_americanus
ENSGMOG00000015352	slbp	75	76.271	ENSUMAG00000006119	SLBP	64	76.271	Ursus_maritimus
ENSGMOG00000015352	slbp	96	70.667	ENSVVUG00000015578	-	53	70.667	Vulpes_vulpes
ENSGMOG00000015352	slbp	95	65.101	ENSXETG00000003876	slbp	57	65.101	Xenopus_tropicalis
ENSGMOG00000015352	slbp	100	72.500	ENSXCOG00000008275	slbp	60	73.248	Xiphophorus_couchianus
ENSGMOG00000015352	slbp	100	72.500	ENSXMAG00000001331	-	56	73.248	Xiphophorus_maculatus