EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSGMOG00000015449 (Gene tree)
Gene ID: -
Gene Symbol: lsm12b
Alias: lsm12|wu:fe01f11|zgc:66039
Full Name: LSM12 homolog b
Gene Type: protein_coding
Species: Gadus_morhua
Status: putative
Strand: Minus strand
Length: 4112 bases
Position: chrGeneScaffold_838:149677-153788
Accession: ZDB-GENE-040426-2164
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSGMOP00000016541	AD	PF09793.9	1.5e-25	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSGMOT00000016959	-	477	-	ENSGMOP00000016541	158 (aa)	-	UPI00023F32D6

Gene Model

Click here to download ENSGMOG00000015449's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSGMOG00000015449's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSGMOG00000015449	lsm12b	100	84.177	ENSG00000161654	LSM12	81	84.177	Homo_sapiens
ENSGMOG00000015449	lsm12b	100	98.101	ENSAPOG00000007907	lsm12b	81	98.101	Acanthochromis_polyacanthus
ENSGMOG00000015449	lsm12b	100	81.646	ENSAMEG00000018321	LSM12	80	81.646	Ailuropoda_melanoleuca
ENSGMOG00000015449	lsm12b	100	97.468	ENSACIG00000008538	lsm12b	81	97.468	Amphilophus_citrinellus
ENSGMOG00000015449	lsm12b	100	98.734	ENSAOCG00000021847	lsm12b	71	98.734	Amphiprion_ocellaris
ENSGMOG00000015449	lsm12b	100	98.734	ENSAPEG00000002252	lsm12b	81	98.734	Amphiprion_percula
ENSGMOG00000015449	lsm12b	100	96.835	ENSATEG00000005705	lsm12b	81	96.835	Anabas_testudineus
ENSGMOG00000015449	lsm12b	100	84.810	ENSACAG00000004618	LSM12	81	84.810	Anolis_carolinensis
ENSGMOG00000015449	lsm12b	100	84.177	ENSANAG00000029011	LSM12	81	84.685	Aotus_nancymaae
ENSGMOG00000015449	lsm12b	100	98.101	ENSACLG00000026332	lsm12b	81	98.101	Astatotilapia_calliptera
ENSGMOG00000015449	lsm12b	100	93.038	ENSAMXG00000032952	lsm12b	81	93.038	Astyanax_mexicanus
ENSGMOG00000015449	lsm12b	100	87.342	ENSAMXG00000036117	lsm12a	73	87.342	Astyanax_mexicanus
ENSGMOG00000015449	lsm12b	100	84.177	ENSBTAG00000016252	LSM12	81	84.177	Bos_taurus
ENSGMOG00000015449	lsm12b	100	84.177	ENSCJAG00000048480	LSM12	81	84.685	Callithrix_jacchus
ENSGMOG00000015449	lsm12b	100	84.177	ENSCAFG00000014379	LSM12	74	84.177	Canis_familiaris
ENSGMOG00000015449	lsm12b	100	84.177	ENSCAFG00020012173	LSM12	81	84.177	Canis_lupus_dingo
ENSGMOG00000015449	lsm12b	100	84.177	ENSCHIG00000018175	LSM12	81	84.177	Capra_hircus
ENSGMOG00000015449	lsm12b	100	84.177	ENSTSYG00000036361	LSM12	81	84.177	Carlito_syrichta
ENSGMOG00000015449	lsm12b	99	82.166	ENSCAPG00000009647	LSM12	86	82.166	Cavia_aperea
ENSGMOG00000015449	lsm12b	100	83.544	ENSCPOG00000012860	LSM12	81	83.784	Cavia_porcellus
ENSGMOG00000015449	lsm12b	100	84.177	ENSCCAG00000032905	LSM12	81	84.685	Cebus_capucinus
ENSGMOG00000015449	lsm12b	100	84.177	ENSCATG00000030577	-	81	84.685	Cercocebus_atys
ENSGMOG00000015449	lsm12b	100	83.544	ENSCLAG00000015759	LSM12	81	83.784	Chinchilla_lanigera
ENSGMOG00000015449	lsm12b	100	84.810	ENSCSAG00000003486	LSM12	81	84.810	Chlorocebus_sabaeus
ENSGMOG00000015449	lsm12b	69	85.321	ENSCHOG00000001198	LSM12	100	85.321	Choloepus_hoffmanni
ENSGMOG00000015449	lsm12b	100	86.076	ENSCPBG00000027105	LSM12	81	86.076	Chrysemys_picta_bellii
ENSGMOG00000015449	lsm12b	100	84.177	ENSCANG00000043328	LSM12	81	84.685	Colobus_angolensis_palliatus
ENSGMOG00000015449	lsm12b	100	84.177	ENSCGRG00001002094	Lsm12	81	84.685	Cricetulus_griseus_chok1gshd
ENSGMOG00000015449	lsm12b	97	84.416	ENSCGRG00000004316	Lsm12	87	84.416	Cricetulus_griseus_crigri
ENSGMOG00000015449	lsm12b	100	98.734	ENSCSEG00000008434	lsm12b	81	98.734	Cynoglossus_semilaevis
ENSGMOG00000015449	lsm12b	100	96.835	ENSCVAG00000008755	lsm12b	81	96.835	Cyprinodon_variegatus
ENSGMOG00000015449	lsm12b	100	93.671	ENSDARG00000109510	lsm12b	81	93.671	Danio_rerio
ENSGMOG00000015449	lsm12b	100	84.810	ENSDARG00000028848	lsm12a	81	84.810	Danio_rerio
ENSGMOG00000015449	lsm12b	100	84.177	ENSDNOG00000002418	LSM12	74	84.177	Dasypus_novemcinctus
ENSGMOG00000015449	lsm12b	100	84.177	ENSDORG00000016381	Lsm12	81	84.685	Dipodomys_ordii
ENSGMOG00000015449	lsm12b	84	30.657	FBgn0030364	Lsm12	63	30.657	Drosophila_melanogaster
ENSGMOG00000015449	lsm12b	100	74.684	ENSETEG00000011012	-	90	74.684	Echinops_telfairi
ENSGMOG00000015449	lsm12b	100	83.544	ENSETEG00000008374	LSM12	81	83.544	Echinops_telfairi
ENSGMOG00000015449	lsm12b	82	65.116	ENSEBUG00000016299	lsm12a	72	65.116	Eptatretus_burgeri
ENSGMOG00000015449	lsm12b	100	84.177	ENSEASG00005010155	LSM12	81	84.177	Equus_asinus_asinus
ENSGMOG00000015449	lsm12b	100	84.177	ENSECAG00000009071	LSM12	81	84.685	Equus_caballus
ENSGMOG00000015449	lsm12b	97	84.314	ENSEEUG00000002419	-	100	84.314	Erinaceus_europaeus
ENSGMOG00000015449	lsm12b	100	91.772	ENSELUG00000000256	-	81	91.772	Esox_lucius
ENSGMOG00000015449	lsm12b	100	94.304	ENSELUG00000015538	lsm12b	80	88.608	Esox_lucius
ENSGMOG00000015449	lsm12b	100	84.177	ENSFCAG00000037021	LSM12	81	84.177	Felis_catus
ENSGMOG00000015449	lsm12b	99	80.769	ENSFDAG00000008954	LSM12	91	80.769	Fukomys_damarensis
ENSGMOG00000015449	lsm12b	100	98.101	ENSFHEG00000019913	lsm12b	81	98.101	Fundulus_heteroclitus
ENSGMOG00000015449	lsm12b	97	84.967	ENSGALG00000039803	LSM12	100	84.967	Gallus_gallus
ENSGMOG00000015449	lsm12b	100	96.835	ENSGAFG00000011829	lsm12b	81	96.835	Gambusia_affinis
ENSGMOG00000015449	lsm12b	100	98.101	ENSGACG00000003428	lsm12b	100	98.101	Gasterosteus_aculeatus
ENSGMOG00000015449	lsm12b	100	84.810	ENSGAGG00000021965	LSM12	81	84.810	Gopherus_agassizii
ENSGMOG00000015449	lsm12b	100	84.177	ENSGGOG00000010589	-	81	84.685	Gorilla_gorilla
ENSGMOG00000015449	lsm12b	97	97.403	ENSHBUG00000007667	lsm12b	68	97.403	Haplochromis_burtoni
ENSGMOG00000015449	lsm12b	100	84.177	ENSHGLG00000011411	LSM12	81	84.685	Heterocephalus_glaber_female
ENSGMOG00000015449	lsm12b	97	83.766	ENSHGLG00100000241	LSM12	82	83.766	Heterocephalus_glaber_male
ENSGMOG00000015449	lsm12b	100	95.570	ENSHCOG00000002094	lsm12b	81	95.570	Hippocampus_comes
ENSGMOG00000015449	lsm12b	100	93.038	ENSIPUG00000014800	lsm12	81	93.038	Ictalurus_punctatus
ENSGMOG00000015449	lsm12b	99	82.692	ENSIPUG00000008936	lsm12a	79	82.692	Ictalurus_punctatus
ENSGMOG00000015449	lsm12b	100	84.177	ENSSTOG00000007403	LSM12	81	84.685	Ictidomys_tridecemlineatus
ENSGMOG00000015449	lsm12b	82	72.868	ENSJJAG00000014652	-	76	72.868	Jaculus_jaculus
ENSGMOG00000015449	lsm12b	100	82.911	ENSJJAG00000004364	-	81	83.784	Jaculus_jaculus
ENSGMOG00000015449	lsm12b	100	74.843	ENSJJAG00000011793	-	83	74.843	Jaculus_jaculus
ENSGMOG00000015449	lsm12b	100	98.101	ENSLBEG00000027999	lsm12b	81	98.101	Labrus_bergylta
ENSGMOG00000015449	lsm12b	100	86.709	ENSLACG00000015981	LSM12	81	86.709	Latimeria_chalumnae
ENSGMOG00000015449	lsm12b	100	92.405	ENSLOCG00000013079	lsm12b	80	92.405	Lepisosteus_oculatus
ENSGMOG00000015449	lsm12b	100	84.177	ENSLAFG00000005202	LSM12	81	84.177	Loxodonta_africana
ENSGMOG00000015449	lsm12b	100	84.177	ENSMFAG00000031376	LSM12	81	84.685	Macaca_fascicularis
ENSGMOG00000015449	lsm12b	55	73.563	ENSMMUG00000042106	-	79	73.563	Macaca_mulatta
ENSGMOG00000015449	lsm12b	100	84.177	ENSMMUG00000006804	LSM12	81	84.685	Macaca_mulatta
ENSGMOG00000015449	lsm12b	55	73.563	ENSMMUG00000038408	-	79	73.563	Macaca_mulatta
ENSGMOG00000015449	lsm12b	100	84.177	ENSMNEG00000030594	-	81	84.685	Macaca_nemestrina
ENSGMOG00000015449	lsm12b	100	84.177	ENSMLEG00000039934	LSM12	81	84.685	Mandrillus_leucophaeus
ENSGMOG00000015449	lsm12b	100	98.101	ENSMAMG00000004279	lsm12b	81	98.101	Mastacembelus_armatus
ENSGMOG00000015449	lsm12b	100	98.101	ENSMZEG00005005754	lsm12b	81	98.101	Maylandia_zebra
ENSGMOG00000015449	lsm12b	100	84.810	ENSMICG00000037219	LSM12	81	85.586	Microcebus_murinus
ENSGMOG00000015449	lsm12b	100	70.253	ENSMOCG00000017015	-	69	70.253	Microtus_ochrogaster
ENSGMOG00000015449	lsm12b	100	84.177	ENSMOCG00000019878	-	81	84.685	Microtus_ochrogaster
ENSGMOG00000015449	lsm12b	100	98.101	ENSMMOG00000020848	lsm12b	81	98.101	Mola_mola
ENSGMOG00000015449	lsm12b	100	98.734	ENSMALG00000007578	lsm12b	81	98.734	Monopterus_albus
ENSGMOG00000015449	lsm12b	100	83.544	MGP_CAROLIEiJ_G0017241	Lsm12	81	83.784	Mus_caroli
ENSGMOG00000015449	lsm12b	100	84.177	ENSMUSG00000020922	Lsm12	81	84.685	Mus_musculus
ENSGMOG00000015449	lsm12b	100	76.000	MGP_PahariEiJ_G0018371	Lsm12	81	84.685	Mus_pahari
ENSGMOG00000015449	lsm12b	100	83.544	MGP_SPRETEiJ_G0018084	Lsm12	79	86.111	Mus_spretus
ENSGMOG00000015449	lsm12b	100	84.810	ENSMLUG00000006391	LSM12	81	84.810	Myotis_lucifugus
ENSGMOG00000015449	lsm12b	96	62.500	ENSNGAG00000015429	-	77	62.500	Nannospalax_galili
ENSGMOG00000015449	lsm12b	100	84.177	ENSNGAG00000001870	Lsm12	81	84.685	Nannospalax_galili
ENSGMOG00000015449	lsm12b	100	98.101	ENSNBRG00000006266	lsm12b	81	98.101	Neolamprologus_brichardi
ENSGMOG00000015449	lsm12b	100	84.177	ENSNLEG00000005580	-	81	84.685	Nomascus_leucogenys
ENSGMOG00000015449	lsm12b	81	83.594	ENSMEUG00000007501	-	78	83.594	Notamacropus_eugenii
ENSGMOG00000015449	lsm12b	100	84.177	ENSOPRG00000008552	LSM12	81	84.177	Ochotona_princeps
ENSGMOG00000015449	lsm12b	100	77.215	ENSODEG00000007886	-	61	77.215	Octodon_degus
ENSGMOG00000015449	lsm12b	100	84.810	ENSODEG00000017998	-	81	85.586	Octodon_degus
ENSGMOG00000015449	lsm12b	100	98.101	ENSONIG00000007933	lsm12b	81	98.101	Oreochromis_niloticus
ENSGMOG00000015449	lsm12b	51	80.247	ENSOANG00000031724	-	100	80.247	Ornithorhynchus_anatinus
ENSGMOG00000015449	lsm12b	99	79.618	ENSOCUG00000027889	-	81	79.618	Oryctolagus_cuniculus
ENSGMOG00000015449	lsm12b	100	81.646	ENSOCUG00000008566	-	80	81.646	Oryctolagus_cuniculus
ENSGMOG00000015449	lsm12b	99	78.981	ENSOCUG00000021254	-	81	78.981	Oryctolagus_cuniculus
ENSGMOG00000015449	lsm12b	99	77.707	ENSOCUG00000024823	-	81	77.707	Oryctolagus_cuniculus
ENSGMOG00000015449	lsm12b	100	96.203	ENSORLG00000011310	lsm12b	81	96.203	Oryzias_latipes
ENSGMOG00000015449	lsm12b	100	96.203	ENSORLG00020002060	lsm12b	74	96.203	Oryzias_latipes_hni
ENSGMOG00000015449	lsm12b	100	96.203	ENSORLG00015001647	lsm12b	74	96.203	Oryzias_latipes_hsok
ENSGMOG00000015449	lsm12b	100	97.468	ENSOMEG00000006184	lsm12b	74	97.468	Oryzias_melastigma
ENSGMOG00000015449	lsm12b	100	84.810	ENSOGAG00000010489	LSM12	81	84.810	Otolemur_garnettii
ENSGMOG00000015449	lsm12b	100	81.646	ENSOARG00000006589	LSM12	79	81.646	Ovis_aries
ENSGMOG00000015449	lsm12b	97	84.314	ENSPPAG00000034974	-	83	84.314	Pan_paniscus
ENSGMOG00000015449	lsm12b	100	84.177	ENSPPRG00000023420	LSM12	81	84.177	Panthera_pardus
ENSGMOG00000015449	lsm12b	70	82.883	ENSPTIG00000014850	-	81	82.883	Panthera_tigris_altaica
ENSGMOG00000015449	lsm12b	97	84.314	ENSPTIG00000012704	-	82	84.314	Panthera_tigris_altaica
ENSGMOG00000015449	lsm12b	100	84.177	ENSPTRG00000009261	LSM12	81	84.685	Pan_troglodytes
ENSGMOG00000015449	lsm12b	100	84.177	ENSPANG00000021315	-	81	84.685	Papio_anubis
ENSGMOG00000015449	lsm12b	100	81.646	ENSPKIG00000017932	-	81	81.646	Paramormyrops_kingsleyae
ENSGMOG00000015449	lsm12b	100	93.038	ENSPKIG00000021058	lsm12b	81	93.038	Paramormyrops_kingsleyae
ENSGMOG00000015449	lsm12b	100	97.468	ENSPMGG00000021344	lsm12b	81	97.468	Periophthalmus_magnuspinnatus
ENSGMOG00000015449	lsm12b	100	84.177	ENSPEMG00000012199	Lsm12	81	84.685	Peromyscus_maniculatus_bairdii
ENSGMOG00000015449	lsm12b	87	67.153	ENSPMAG00000005461	lsm12a	79	67.153	Petromyzon_marinus
ENSGMOG00000015449	lsm12b	100	84.177	ENSPCIG00000020244	LSM12	81	84.177	Phascolarctos_cinereus
ENSGMOG00000015449	lsm12b	100	95.570	ENSPFOG00000015930	lsm12b	81	95.570	Poecilia_formosa
ENSGMOG00000015449	lsm12b	100	95.570	ENSPLAG00000021089	lsm12b	81	95.570	Poecilia_latipinna
ENSGMOG00000015449	lsm12b	100	95.570	ENSPMEG00000012961	lsm12b	81	95.570	Poecilia_mexicana
ENSGMOG00000015449	lsm12b	100	96.835	ENSPREG00000010236	lsm12b	88	96.835	Poecilia_reticulata
ENSGMOG00000015449	lsm12b	100	84.177	ENSPPYG00000008344	LSM12	81	84.177	Pongo_abelii
ENSGMOG00000015449	lsm12b	81	85.156	ENSPCAG00000008790	LSM12	81	85.156	Procavia_capensis
ENSGMOG00000015449	lsm12b	100	84.177	ENSPCOG00000027951	LSM12	81	84.685	Propithecus_coquereli
ENSGMOG00000015449	lsm12b	100	84.810	ENSPVAG00000013706	LSM12	81	84.810	Pteropus_vampyrus
ENSGMOG00000015449	lsm12b	100	98.101	ENSPNYG00000003386	lsm12b	81	98.101	Pundamilia_nyererei
ENSGMOG00000015449	lsm12b	100	87.342	ENSPNAG00000018435	lsm12a	81	87.342	Pygocentrus_nattereri
ENSGMOG00000015449	lsm12b	100	94.304	ENSPNAG00000004186	lsm12b	81	94.304	Pygocentrus_nattereri
ENSGMOG00000015449	lsm12b	100	84.177	ENSRNOG00000020894	Lsm12	81	84.177	Rattus_norvegicus
ENSGMOG00000015449	lsm12b	100	84.177	ENSRBIG00000027910	LSM12	81	84.685	Rhinopithecus_bieti
ENSGMOG00000015449	lsm12b	100	84.177	ENSRROG00000045530	-	81	84.685	Rhinopithecus_roxellana
ENSGMOG00000015449	lsm12b	73	73.276	ENSRROG00000000537	-	80	73.276	Rhinopithecus_roxellana
ENSGMOG00000015449	lsm12b	75	31.298	YHR121W	-	68	31.298	Saccharomyces_cerevisiae
ENSGMOG00000015449	lsm12b	100	84.177	ENSSBOG00000025310	LSM12	81	84.685	Saimiri_boliviensis_boliviensis
ENSGMOG00000015449	lsm12b	100	82.911	ENSSHAG00000014914	LSM12	100	82.911	Sarcophilus_harrisii
ENSGMOG00000015449	lsm12b	100	93.671	ENSSFOG00015020392	lsm12a	81	93.671	Scleropages_formosus
ENSGMOG00000015449	lsm12b	100	93.671	ENSSFOG00015009612	lsm12	81	93.671	Scleropages_formosus
ENSGMOG00000015449	lsm12b	100	98.734	ENSSMAG00000008089	lsm12b	81	98.734	Scophthalmus_maximus
ENSGMOG00000015449	lsm12b	100	98.101	ENSSDUG00000012711	lsm12b	81	98.101	Seriola_dumerili
ENSGMOG00000015449	lsm12b	100	98.101	ENSSLDG00000007404	lsm12b	81	98.101	Seriola_lalandi_dorsalis
ENSGMOG00000015449	lsm12b	97	83.660	ENSSARG00000005537	LSM12	100	83.660	Sorex_araneus
ENSGMOG00000015449	lsm12b	100	86.076	ENSSPUG00000011984	LSM12	81	86.076	Sphenodon_punctatus
ENSGMOG00000015449	lsm12b	100	98.734	ENSSPAG00000017058	lsm12b	81	98.734	Stegastes_partitus
ENSGMOG00000015449	lsm12b	100	84.177	ENSSSCG00000032394	LSM12	81	84.177	Sus_scrofa
ENSGMOG00000015449	lsm12b	100	96.835	ENSTRUG00000007121	lsm12b	81	96.835	Takifugu_rubripes
ENSGMOG00000015449	lsm12b	100	95.570	ENSTNIG00000014436	lsm12b	81	95.570	Tetraodon_nigroviridis
ENSGMOG00000015449	lsm12b	100	81.646	ENSTBEG00000012392	-	81	81.646	Tupaia_belangeri
ENSGMOG00000015449	lsm12b	100	83.544	ENSTBEG00000012523	-	81	83.544	Tupaia_belangeri
ENSGMOG00000015449	lsm12b	100	84.177	ENSTTRG00000010433	LSM12	81	84.177	Tursiops_truncatus
ENSGMOG00000015449	lsm12b	100	84.177	ENSUAMG00000006313	LSM12	98	81.646	Ursus_americanus
ENSGMOG00000015449	lsm12b	100	81.646	ENSUMAG00000012987	LSM12	90	81.646	Ursus_maritimus
ENSGMOG00000015449	lsm12b	100	78.481	ENSVPAG00000011145	LSM12	81	78.481	Vicugna_pacos
ENSGMOG00000015449	lsm12b	100	84.177	ENSVVUG00000017581	LSM12	81	84.177	Vulpes_vulpes
ENSGMOG00000015449	lsm12b	100	59.494	ENSXETG00000003371	lsm12	76	59.494	Xenopus_tropicalis
ENSGMOG00000015449	lsm12b	100	96.835	ENSXCOG00000003994	lsm12b	81	96.835	Xiphophorus_couchianus
ENSGMOG00000015449	lsm12b	100	96.835	ENSXMAG00000020950	lsm12b	81	96.835	Xiphophorus_maculatus