EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSGMOG00000015540 (Gene tree)
Gene ID: -
Gene Symbol: sf3a3
Alias: wu:fi15a06|wu:fj94f01|zgc:110227
Full Name: splicing factor 3a%2C subunit 3
Gene Type: protein_coding
Species: Gadus_morhua
Status: putative
Strand: Minus strand
Length: 4582 bases
Position: chrGeneScaffold_955:160904-165485
Accession: ZDB-GENE-040908-1
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSGMOP00000016670	SF3a60_bindingd	PF12108.8	1.1e-15	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSGMOT00000017088	-	1506	-	ENSGMOP00000016670	501 (aa)	-	UPI00023F346E

Gene Model

Click here to download ENSGMOG00000015540's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSGMOG00000015540's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSGMOG00000015540	sf3a3	100	89.222	ENSG00000183431	SF3A3	100	89.222	Homo_sapiens
ENSGMOG00000015540	sf3a3	100	92.814	ENSAPOG00000015608	sf3a3	100	92.814	Acanthochromis_polyacanthus
ENSGMOG00000015540	sf3a3	100	89.222	ENSAMEG00000001262	SF3A3	100	89.222	Ailuropoda_melanoleuca
ENSGMOG00000015540	sf3a3	95	86.982	ENSACIG00000009061	sf3a3	99	86.982	Amphilophus_citrinellus
ENSGMOG00000015540	sf3a3	100	93.413	ENSAOCG00000013954	sf3a3	100	93.413	Amphiprion_ocellaris
ENSGMOG00000015540	sf3a3	100	93.413	ENSAPEG00000007297	sf3a3	100	93.413	Amphiprion_percula
ENSGMOG00000015540	sf3a3	100	93.014	ENSATEG00000008754	sf3a3	100	93.014	Anabas_testudineus
ENSGMOG00000015540	sf3a3	94	89.339	ENSAPLG00000014900	SF3A3	100	89.339	Anas_platyrhynchos
ENSGMOG00000015540	sf3a3	100	87.625	ENSACAG00000017058	SF3A3	100	87.625	Anolis_carolinensis
ENSGMOG00000015540	sf3a3	100	69.062	ENSANAG00000036903	-	100	69.062	Aotus_nancymaae
ENSGMOG00000015540	sf3a3	99	86.345	ENSANAG00000014878	SF3A3	100	86.345	Aotus_nancymaae
ENSGMOG00000015540	sf3a3	100	93.214	ENSACLG00000017977	sf3a3	100	93.214	Astatotilapia_calliptera
ENSGMOG00000015540	sf3a3	100	93.812	ENSAMXG00000016855	sf3a3	87	93.812	Astyanax_mexicanus
ENSGMOG00000015540	sf3a3	100	89.222	ENSBTAG00000007299	SF3A3	100	89.222	Bos_taurus
ENSGMOG00000015540	sf3a3	100	51.093	WBGene00011758	T13H5.4	100	51.093	Caenorhabditis_elegans
ENSGMOG00000015540	sf3a3	100	89.222	ENSCJAG00000002176	SF3A3	100	89.222	Callithrix_jacchus
ENSGMOG00000015540	sf3a3	100	89.222	ENSCAFG00000000683	-	100	89.222	Canis_familiaris
ENSGMOG00000015540	sf3a3	100	89.222	ENSCAFG00000003222	-	100	89.222	Canis_familiaris
ENSGMOG00000015540	sf3a3	100	89.222	ENSCAFG00020006186	SF3A3	100	89.222	Canis_lupus_dingo
ENSGMOG00000015540	sf3a3	100	89.222	ENSCHIG00000020638	SF3A3	100	89.222	Capra_hircus
ENSGMOG00000015540	sf3a3	100	83.034	ENSTSYG00000008417	SF3A3	100	83.034	Carlito_syrichta
ENSGMOG00000015540	sf3a3	85	58.581	ENSCAPG00000003466	SF3A3	100	56.293	Cavia_aperea
ENSGMOG00000015540	sf3a3	100	89.022	ENSCPOG00000008660	SF3A3	100	89.022	Cavia_porcellus
ENSGMOG00000015540	sf3a3	100	65.010	ENSCCAG00000034048	-	100	62.624	Cebus_capucinus
ENSGMOG00000015540	sf3a3	100	89.222	ENSCCAG00000033732	SF3A3	100	89.222	Cebus_capucinus
ENSGMOG00000015540	sf3a3	100	89.222	ENSCATG00000043496	SF3A3	100	89.222	Cercocebus_atys
ENSGMOG00000015540	sf3a3	94	72.068	ENSCATG00000041660	-	100	73.561	Cercocebus_atys
ENSGMOG00000015540	sf3a3	100	66.932	ENSCATG00000043537	-	100	67.331	Cercocebus_atys
ENSGMOG00000015540	sf3a3	100	88.822	ENSCLAG00000010838	SF3A3	100	88.822	Chinchilla_lanigera
ENSGMOG00000015540	sf3a3	95	88.655	ENSCSAG00000001120	SF3A3	100	88.655	Chlorocebus_sabaeus
ENSGMOG00000015540	sf3a3	80	85.714	ENSCHOG00000006849	SF3A3	80	85.714	Choloepus_hoffmanni
ENSGMOG00000015540	sf3a3	70	61.878	ENSCPBG00000007472	-	95	61.878	Chrysemys_picta_bellii
ENSGMOG00000015540	sf3a3	100	81.437	ENSCPBG00000018291	-	100	81.437	Chrysemys_picta_bellii
ENSGMOG00000015540	sf3a3	100	67.729	ENSCING00000002730	-	100	67.729	Ciona_intestinalis
ENSGMOG00000015540	sf3a3	100	66.866	ENSCSAVG00000005063	-	100	66.866	Ciona_savignyi
ENSGMOG00000015540	sf3a3	100	64.271	ENSCANG00000035535	-	100	64.271	Colobus_angolensis_palliatus
ENSGMOG00000015540	sf3a3	100	89.222	ENSCANG00000042083	SF3A3	100	89.222	Colobus_angolensis_palliatus
ENSGMOG00000015540	sf3a3	100	88.623	ENSCGRG00001011320	Sf3a3	100	88.623	Cricetulus_griseus_chok1gshd
ENSGMOG00000015540	sf3a3	100	88.623	ENSCGRG00000012156	Sf3a3	100	88.623	Cricetulus_griseus_crigri
ENSGMOG00000015540	sf3a3	100	92.216	ENSCSEG00000010401	sf3a3	100	92.216	Cynoglossus_semilaevis
ENSGMOG00000015540	sf3a3	94	90.405	ENSCVAG00000010239	sf3a3	95	90.405	Cyprinodon_variegatus
ENSGMOG00000015540	sf3a3	100	92.016	ENSDARG00000100114	sf3a3	100	92.124	Danio_rerio
ENSGMOG00000015540	sf3a3	91	88.621	ENSDNOG00000046628	SF3A3	99	88.621	Dasypus_novemcinctus
ENSGMOG00000015540	sf3a3	100	89.022	ENSDORG00000008798	Sf3a3	100	89.022	Dipodomys_ordii
ENSGMOG00000015540	sf3a3	100	64.032	FBgn0014366	noi	100	63.439	Drosophila_melanogaster
ENSGMOG00000015540	sf3a3	100	78.330	ENSEBUG00000015411	sf3a3	92	78.728	Eptatretus_burgeri
ENSGMOG00000015540	sf3a3	100	89.222	ENSEASG00005012906	SF3A3	100	89.222	Equus_asinus_asinus
ENSGMOG00000015540	sf3a3	100	89.222	ENSECAG00000017333	SF3A3	100	89.222	Equus_caballus
ENSGMOG00000015540	sf3a3	100	93.014	ENSELUG00000010024	sf3a3	100	93.014	Esox_lucius
ENSGMOG00000015540	sf3a3	100	89.222	ENSFCAG00000027772	SF3A3	100	89.222	Felis_catus
ENSGMOG00000015540	sf3a3	100	88.822	ENSFALG00000001003	SF3A3	100	88.822	Ficedula_albicollis
ENSGMOG00000015540	sf3a3	100	89.022	ENSFDAG00000020908	SF3A3	100	89.022	Fukomys_damarensis
ENSGMOG00000015540	sf3a3	100	92.615	ENSFHEG00000019107	sf3a3	100	92.615	Fundulus_heteroclitus
ENSGMOG00000015540	sf3a3	100	88.623	ENSGALG00000001540	SF3A3	100	88.623	Gallus_gallus
ENSGMOG00000015540	sf3a3	100	92.016	ENSGAFG00000002320	sf3a3	100	92.016	Gambusia_affinis
ENSGMOG00000015540	sf3a3	100	93.014	ENSGACG00000007842	sf3a3	100	93.014	Gasterosteus_aculeatus
ENSGMOG00000015540	sf3a3	100	88.224	ENSGAGG00000014980	SF3A3	100	88.224	Gopherus_agassizii
ENSGMOG00000015540	sf3a3	100	68.663	ENSGGOG00000022611	-	100	68.263	Gorilla_gorilla
ENSGMOG00000015540	sf3a3	100	89.222	ENSGGOG00000013928	SF3A3	100	89.222	Gorilla_gorilla
ENSGMOG00000015540	sf3a3	100	93.214	ENSHBUG00000018158	sf3a3	100	93.214	Haplochromis_burtoni
ENSGMOG00000015540	sf3a3	100	89.022	ENSHGLG00000012502	SF3A3	100	89.022	Heterocephalus_glaber_female
ENSGMOG00000015540	sf3a3	100	89.022	ENSHGLG00100010546	SF3A3	100	89.022	Heterocephalus_glaber_male
ENSGMOG00000015540	sf3a3	100	90.818	ENSHCOG00000015109	sf3a3	100	90.818	Hippocampus_comes
ENSGMOG00000015540	sf3a3	100	91.617	ENSIPUG00000011603	sf3a3	100	91.617	Ictalurus_punctatus
ENSGMOG00000015540	sf3a3	100	88.822	ENSSTOG00000001691	SF3A3	100	88.822	Ictidomys_tridecemlineatus
ENSGMOG00000015540	sf3a3	100	88.822	ENSJJAG00000012404	Sf3a3	100	88.822	Jaculus_jaculus
ENSGMOG00000015540	sf3a3	100	92.615	ENSKMAG00000007632	sf3a3	100	92.615	Kryptolebias_marmoratus
ENSGMOG00000015540	sf3a3	100	85.458	ENSLBEG00000000816	sf3a3	100	85.458	Labrus_bergylta
ENSGMOG00000015540	sf3a3	100	92.615	ENSLOCG00000003273	sf3a3	100	92.615	Lepisosteus_oculatus
ENSGMOG00000015540	sf3a3	100	77.645	ENSLAFG00000008094	SF3A3	100	77.645	Loxodonta_africana
ENSGMOG00000015540	sf3a3	94	71.642	ENSMFAG00000036706	-	100	73.348	Macaca_fascicularis
ENSGMOG00000015540	sf3a3	100	89.222	ENSMFAG00000043047	SF3A3	100	89.222	Macaca_fascicularis
ENSGMOG00000015540	sf3a3	100	89.222	ENSMMUG00000023199	SF3A3	100	89.222	Macaca_mulatta
ENSGMOG00000015540	sf3a3	100	69.860	ENSMMUG00000038820	-	100	71.457	Macaca_mulatta
ENSGMOG00000015540	sf3a3	100	89.222	ENSMNEG00000044291	SF3A3	100	89.222	Macaca_nemestrina
ENSGMOG00000015540	sf3a3	94	70.789	ENSMNEG00000028686	-	100	72.495	Macaca_nemestrina
ENSGMOG00000015540	sf3a3	100	74.052	ENSMLEG00000036714	-	100	75.449	Mandrillus_leucophaeus
ENSGMOG00000015540	sf3a3	100	66.135	ENSMLEG00000028631	-	100	66.534	Mandrillus_leucophaeus
ENSGMOG00000015540	sf3a3	100	89.222	ENSMLEG00000030641	SF3A3	100	89.222	Mandrillus_leucophaeus
ENSGMOG00000015540	sf3a3	100	93.014	ENSMAMG00000001942	sf3a3	100	93.014	Mastacembelus_armatus
ENSGMOG00000015540	sf3a3	100	93.214	ENSMZEG00005016987	sf3a3	100	93.214	Maylandia_zebra
ENSGMOG00000015540	sf3a3	100	84.095	ENSMGAG00000002875	SF3A3	100	84.095	Meleagris_gallopavo
ENSGMOG00000015540	sf3a3	100	83.034	ENSMICG00000043548	-	100	83.034	Microcebus_murinus
ENSGMOG00000015540	sf3a3	91	86.245	ENSMICG00000026541	-	100	86.245	Microcebus_murinus
ENSGMOG00000015540	sf3a3	100	85.030	ENSMICG00000001485	-	100	85.030	Microcebus_murinus
ENSGMOG00000015540	sf3a3	95	82.947	ENSMOCG00000014565	-	97	81.895	Microtus_ochrogaster
ENSGMOG00000015540	sf3a3	100	85.828	ENSMOCG00000019939	-	100	85.828	Microtus_ochrogaster
ENSGMOG00000015540	sf3a3	100	92.415	ENSMMOG00000014307	sf3a3	100	92.415	Mola_mola
ENSGMOG00000015540	sf3a3	100	69.709	ENSMODG00000017729	-	100	68.738	Monodelphis_domestica
ENSGMOG00000015540	sf3a3	100	81.637	ENSMODG00000024045	-	100	81.637	Monodelphis_domestica
ENSGMOG00000015540	sf3a3	100	92.415	ENSMALG00000004836	sf3a3	100	92.415	Monopterus_albus
ENSGMOG00000015540	sf3a3	100	88.623	MGP_CAROLIEiJ_G0026449	Sf3a3	100	88.623	Mus_caroli
ENSGMOG00000015540	sf3a3	100	88.623	ENSMUSG00000028902	Sf3a3	100	88.623	Mus_musculus
ENSGMOG00000015540	sf3a3	100	84.431	MGP_PahariEiJ_G0028780	Sf3a3	100	84.431	Mus_pahari
ENSGMOG00000015540	sf3a3	100	88.623	MGP_SPRETEiJ_G0027428	Sf3a3	100	88.623	Mus_spretus
ENSGMOG00000015540	sf3a3	100	88.822	ENSMLUG00000000991	SF3A3	100	88.822	Myotis_lucifugus
ENSGMOG00000015540	sf3a3	100	84.032	ENSNGAG00000018032	Sf3a3	100	84.032	Nannospalax_galili
ENSGMOG00000015540	sf3a3	100	81.437	ENSNLEG00000011720	SF3A3	100	81.437	Nomascus_leucogenys
ENSGMOG00000015540	sf3a3	100	89.022	ENSOPRG00000012785	SF3A3	100	89.022	Ochotona_princeps
ENSGMOG00000015540	sf3a3	100	74.502	ENSODEG00000000937	-	100	76.892	Octodon_degus
ENSGMOG00000015540	sf3a3	100	85.030	ENSODEG00000007470	-	100	85.030	Octodon_degus
ENSGMOG00000015540	sf3a3	100	78.044	ENSODEG00000018393	-	100	77.844	Octodon_degus
ENSGMOG00000015540	sf3a3	100	83.433	ENSODEG00000006854	-	100	85.828	Octodon_degus
ENSGMOG00000015540	sf3a3	87	93.333	ENSONIG00000010296	sf3a3	100	93.333	Oreochromis_niloticus
ENSGMOG00000015540	sf3a3	94	88.699	ENSOANG00000002473	SF3A3	100	88.699	Ornithorhynchus_anatinus
ENSGMOG00000015540	sf3a3	100	89.022	ENSOCUG00000005407	SF3A3	100	89.022	Oryctolagus_cuniculus
ENSGMOG00000015540	sf3a3	100	91.018	ENSORLG00000008175	sf3a3	100	91.018	Oryzias_latipes
ENSGMOG00000015540	sf3a3	100	90.818	ENSORLG00020013708	sf3a3	100	90.818	Oryzias_latipes_hni
ENSGMOG00000015540	sf3a3	100	91.018	ENSORLG00015004104	sf3a3	100	91.018	Oryzias_latipes_hsok
ENSGMOG00000015540	sf3a3	100	91.617	ENSOMEG00000020177	sf3a3	100	91.617	Oryzias_melastigma
ENSGMOG00000015540	sf3a3	100	89.222	ENSOARG00000019950	SF3A3	100	89.222	Ovis_aries
ENSGMOG00000015540	sf3a3	100	68.263	ENSPPAG00000039955	-	100	67.864	Pan_paniscus
ENSGMOG00000015540	sf3a3	100	89.222	ENSPPAG00000034066	SF3A3	100	89.222	Pan_paniscus
ENSGMOG00000015540	sf3a3	100	89.222	ENSPPRG00000001258	SF3A3	100	89.222	Panthera_pardus
ENSGMOG00000015540	sf3a3	100	89.222	ENSPTIG00000007515	SF3A3	100	89.222	Panthera_tigris_altaica
ENSGMOG00000015540	sf3a3	100	69.062	ENSPTRG00000046013	-	100	68.663	Pan_troglodytes
ENSGMOG00000015540	sf3a3	100	89.222	ENSPTRG00000000559	SF3A3	100	89.222	Pan_troglodytes
ENSGMOG00000015540	sf3a3	100	89.222	ENSPANG00000021859	SF3A3	100	89.222	Papio_anubis
ENSGMOG00000015540	sf3a3	87	81.818	ENSPANG00000031214	-	100	65.469	Papio_anubis
ENSGMOG00000015540	sf3a3	100	76.647	ENSPANG00000029393	-	100	78.044	Papio_anubis
ENSGMOG00000015540	sf3a3	100	92.216	ENSPKIG00000004719	sf3a3	100	92.216	Paramormyrops_kingsleyae
ENSGMOG00000015540	sf3a3	100	86.282	ENSPSIG00000004273	SF3A3	100	86.282	Pelodiscus_sinensis
ENSGMOG00000015540	sf3a3	91	90.372	ENSPMGG00000003610	sf3a3	94	90.372	Periophthalmus_magnuspinnatus
ENSGMOG00000015540	sf3a3	100	88.623	ENSPEMG00000020805	Sf3a3	100	88.623	Peromyscus_maniculatus_bairdii
ENSGMOG00000015540	sf3a3	54	75.556	ENSPMAG00000001044	sf3a3	98	75.556	Petromyzon_marinus
ENSGMOG00000015540	sf3a3	100	88.822	ENSPCIG00000025719	SF3A3	100	88.822	Phascolarctos_cinereus
ENSGMOG00000015540	sf3a3	100	92.016	ENSPFOG00000005284	sf3a3	100	92.016	Poecilia_formosa
ENSGMOG00000015540	sf3a3	99	88.732	ENSPLAG00000003979	sf3a3	92	88.732	Poecilia_latipinna
ENSGMOG00000015540	sf3a3	78	86.005	ENSPMEG00000021132	sf3a3	88	86.005	Poecilia_mexicana
ENSGMOG00000015540	sf3a3	100	91.816	ENSPREG00000013802	sf3a3	100	91.816	Poecilia_reticulata
ENSGMOG00000015540	sf3a3	100	86.826	ENSPPYG00000001519	SF3A3	100	86.826	Pongo_abelii
ENSGMOG00000015540	sf3a3	100	82.834	ENSPCAG00000010734	SF3A3	100	82.834	Procavia_capensis
ENSGMOG00000015540	sf3a3	100	79.563	ENSPCOG00000020389	-	100	79.563	Propithecus_coquereli
ENSGMOG00000015540	sf3a3	100	73.054	ENSPCOG00000017131	-	100	73.054	Propithecus_coquereli
ENSGMOG00000015540	sf3a3	100	77.445	ENSPVAG00000010158	SF3A3	100	77.445	Pteropus_vampyrus
ENSGMOG00000015540	sf3a3	100	93.214	ENSPNYG00000000786	sf3a3	100	93.214	Pundamilia_nyererei
ENSGMOG00000015540	sf3a3	100	94.012	ENSPNAG00000010298	sf3a3	100	94.012	Pygocentrus_nattereri
ENSGMOG00000015540	sf3a3	100	88.623	ENSRNOG00000007629	Sf3a3	100	88.623	Rattus_norvegicus
ENSGMOG00000015540	sf3a3	100	67.465	ENSRBIG00000041123	-	100	67.465	Rhinopithecus_bieti
ENSGMOG00000015540	sf3a3	100	89.222	ENSRBIG00000043567	SF3A3	100	89.222	Rhinopithecus_bieti
ENSGMOG00000015540	sf3a3	100	65.868	ENSRBIG00000043833	-	100	65.868	Rhinopithecus_bieti
ENSGMOG00000015540	sf3a3	94	70.789	ENSRROG00000032346	-	100	70.789	Rhinopithecus_roxellana
ENSGMOG00000015540	sf3a3	100	89.222	ENSRROG00000033888	SF3A3	100	89.222	Rhinopithecus_roxellana
ENSGMOG00000015540	sf3a3	94	87.172	ENSSBOG00000032688	SF3A3	100	87.172	Saimiri_boliviensis_boliviensis
ENSGMOG00000015540	sf3a3	100	64.870	ENSSBOG00000026932	-	100	64.271	Saimiri_boliviensis_boliviensis
ENSGMOG00000015540	sf3a3	90	89.404	ENSSHAG00000014530	SF3A3	100	89.404	Sarcophilus_harrisii
ENSGMOG00000015540	sf3a3	100	93.014	ENSSFOG00015005975	sf3a3	100	93.014	Scleropages_formosus
ENSGMOG00000015540	sf3a3	100	92.415	ENSSMAG00000020213	sf3a3	100	92.415	Scophthalmus_maximus
ENSGMOG00000015540	sf3a3	100	89.421	ENSSDUG00000011590	sf3a3	100	89.421	Seriola_dumerili
ENSGMOG00000015540	sf3a3	100	93.214	ENSSLDG00000020635	sf3a3	100	93.214	Seriola_lalandi_dorsalis
ENSGMOG00000015540	sf3a3	100	88.024	ENSSPUG00000004010	SF3A3	100	88.024	Sphenodon_punctatus
ENSGMOG00000015540	sf3a3	100	93.413	ENSSPAG00000018653	sf3a3	100	93.413	Stegastes_partitus
ENSGMOG00000015540	sf3a3	100	89.222	ENSSSCG00000003643	SF3A3	100	89.222	Sus_scrofa
ENSGMOG00000015540	sf3a3	87	89.655	ENSTGUG00000001466	SF3A3	100	89.450	Taeniopygia_guttata
ENSGMOG00000015540	sf3a3	100	90.818	ENSTRUG00000009089	sf3a3	100	90.818	Takifugu_rubripes
ENSGMOG00000015540	sf3a3	100	90.060	ENSTNIG00000009800	sf3a3	100	90.060	Tetraodon_nigroviridis
ENSGMOG00000015540	sf3a3	100	78.044	ENSTBEG00000007614	SF3A3	100	78.044	Tupaia_belangeri
ENSGMOG00000015540	sf3a3	100	89.022	ENSTTRG00000013519	SF3A3	100	89.022	Tursiops_truncatus
ENSGMOG00000015540	sf3a3	100	89.222	ENSUAMG00000006134	SF3A3	100	89.222	Ursus_americanus
ENSGMOG00000015540	sf3a3	100	89.222	ENSUMAG00000021250	SF3A3	100	89.222	Ursus_maritimus
ENSGMOG00000015540	sf3a3	66	95.349	ENSVPAG00000004778	SF3A3	73	95.349	Vicugna_pacos
ENSGMOG00000015540	sf3a3	100	85.429	ENSVVUG00000022908	SF3A3	100	85.429	Vulpes_vulpes
ENSGMOG00000015540	sf3a3	100	87.625	ENSXETG00000022923	sf3a3	100	87.625	Xenopus_tropicalis
ENSGMOG00000015540	sf3a3	100	92.016	ENSXMAG00000017165	sf3a3	100	92.016	Xiphophorus_maculatus