EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSGMOG00000015607 (Gene tree)
Gene ID: -
Gene Symbol: snrpd1
Alias: CHUNP6882|fk26a01|wu:fk26a01|zgc:86929
Full Name: small nuclear ribonucleoprotein D1 polypeptide
Gene Type: protein_coding
Species: Gadus_morhua
Status: putative
Strand: Minus strand
Length: 3849 bases
Position: chrGeneScaffold_1605:106508-110356
Accession: ZDB-GENE-020419-14
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSGMOP00000016727	LSM	PF01423.22	3.7e-19	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSGMOT00000017146	-	360	-	ENSGMOP00000016727	119 (aa)	-	UPI00000FBF1E

Gene Model

Click here to download ENSGMOG00000015607's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSGMOG00000015607's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSGMOG00000015607	snrpd1	65	33.333	ENSGMOG00000019832	oscp1a	66	33.333

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSGMOG00000015607	snrpd1	100	97.479	ENSG00000167088	SNRPD1	100	97.479	Homo_sapiens
ENSGMOG00000015607	snrpd1	100	99.160	ENSAPOG00000019446	snrpd1	65	99.160	Acanthochromis_polyacanthus
ENSGMOG00000015607	snrpd1	98	95.726	ENSAMEG00000002576	SNRPD1	100	95.726	Ailuropoda_melanoleuca
ENSGMOG00000015607	snrpd1	94	99.107	ENSACIG00000011263	snrpd1	100	99.107	Amphilophus_citrinellus
ENSGMOG00000015607	snrpd1	100	99.160	ENSAOCG00000007406	snrpd1	100	99.160	Amphiprion_ocellaris
ENSGMOG00000015607	snrpd1	100	94.958	ENSAPEG00000014961	snrpd1	100	94.958	Amphiprion_percula
ENSGMOG00000015607	snrpd1	94	99.107	ENSAPEG00000012539	SNRPD1	100	99.107	Amphiprion_percula
ENSGMOG00000015607	snrpd1	100	99.160	ENSATEG00000014399	snrpd1	100	99.160	Anabas_testudineus
ENSGMOG00000015607	snrpd1	97	97.391	ENSAPLG00000012256	SNRPD1	97	97.391	Anas_platyrhynchos
ENSGMOG00000015607	snrpd1	100	97.479	ENSACAG00000006364	SNRPD1	100	97.479	Anolis_carolinensis
ENSGMOG00000015607	snrpd1	100	97.479	ENSANAG00000025641	SNRPD1	100	97.479	Aotus_nancymaae
ENSGMOG00000015607	snrpd1	94	99.107	ENSACLG00000017406	snrpd1	100	99.107	Astatotilapia_calliptera
ENSGMOG00000015607	snrpd1	100	100.000	ENSAMXG00000004589	snrpd1	100	100.000	Astyanax_mexicanus
ENSGMOG00000015607	snrpd1	94	93.750	ENSBTAG00000047266	-	94	93.750	Bos_taurus
ENSGMOG00000015607	snrpd1	79	91.489	ENSBTAG00000055316	-	81	91.489	Bos_taurus
ENSGMOG00000015607	snrpd1	81	94.792	ENSBTAG00000012376	-	72	94.792	Bos_taurus
ENSGMOG00000015607	snrpd1	100	97.479	ENSBTAG00000008292	SNRPD1	100	97.479	Bos_taurus
ENSGMOG00000015607	snrpd1	74	78.409	WBGene00004916	snr-3	76	73.958	Caenorhabditis_elegans
ENSGMOG00000015607	snrpd1	100	97.479	ENSCJAG00000042955	SNRPD1	100	97.479	Callithrix_jacchus
ENSGMOG00000015607	snrpd1	100	97.479	ENSCAFG00000018247	SNRPD1	100	97.479	Canis_familiaris
ENSGMOG00000015607	snrpd1	80	96.842	ENSCAFG00020015914	SNRPD1	74	96.842	Canis_lupus_dingo
ENSGMOG00000015607	snrpd1	100	94.958	ENSCHIG00000005557	SNRPD1	100	94.958	Capra_hircus
ENSGMOG00000015607	snrpd1	100	97.479	ENSTSYG00000030028	SNRPD1	100	97.479	Carlito_syrichta
ENSGMOG00000015607	snrpd1	97	96.522	ENSCAPG00000008103	SNRPD1	99	96.522	Cavia_aperea
ENSGMOG00000015607	snrpd1	100	97.479	ENSCPOG00000004679	SNRPD1	100	97.479	Cavia_porcellus
ENSGMOG00000015607	snrpd1	100	97.479	ENSCCAG00000032658	SNRPD1	100	97.479	Cebus_capucinus
ENSGMOG00000015607	snrpd1	94	93.750	ENSCCAG00000016652	-	94	93.750	Cebus_capucinus
ENSGMOG00000015607	snrpd1	81	92.708	ENSCCAG00000005390	-	81	92.708	Cebus_capucinus
ENSGMOG00000015607	snrpd1	100	96.639	ENSCCAG00000020611	-	100	96.639	Cebus_capucinus
ENSGMOG00000015607	snrpd1	100	97.479	ENSCATG00000039978	SNRPD1	100	97.479	Cercocebus_atys
ENSGMOG00000015607	snrpd1	100	97.479	ENSCLAG00000008691	SNRPD1	100	97.479	Chinchilla_lanigera
ENSGMOG00000015607	snrpd1	100	97.479	ENSCSAG00000017654	SNRPD1	100	97.479	Chlorocebus_sabaeus
ENSGMOG00000015607	snrpd1	100	97.479	ENSCPBG00000023143	SNRPD1	100	97.479	Chrysemys_picta_bellii
ENSGMOG00000015607	snrpd1	72	84.884	ENSCING00000024100	-	69	84.884	Ciona_intestinalis
ENSGMOG00000015607	snrpd1	73	85.057	ENSCSAVG00000004578	-	70	85.057	Ciona_savignyi
ENSGMOG00000015607	snrpd1	81	72.917	ENSCGRG00001009945	-	85	72.917	Cricetulus_griseus_chok1gshd
ENSGMOG00000015607	snrpd1	100	97.479	ENSCGRG00001021055	-	100	97.479	Cricetulus_griseus_chok1gshd
ENSGMOG00000015607	snrpd1	81	72.917	ENSCGRG00000006224	-	85	72.917	Cricetulus_griseus_crigri
ENSGMOG00000015607	snrpd1	100	97.479	ENSCGRG00000000490	-	100	97.479	Cricetulus_griseus_crigri
ENSGMOG00000015607	snrpd1	100	97.479	ENSCSEG00000018141	snrpd1	100	97.479	Cynoglossus_semilaevis
ENSGMOG00000015607	snrpd1	100	99.160	ENSCVAG00000000534	snrpd1	100	99.160	Cyprinodon_variegatus
ENSGMOG00000015607	snrpd1	100	100.000	ENSDARG00000011648	snrpd1	100	100.000	Danio_rerio
ENSGMOG00000015607	snrpd1	100	97.479	ENSDNOG00000040310	SNRPD1	100	97.479	Dasypus_novemcinctus
ENSGMOG00000015607	snrpd1	100	97.479	ENSDORG00000008349	Snrpd1	100	97.479	Dipodomys_ordii
ENSGMOG00000015607	snrpd1	79	80.851	FBgn0261933	SmD1	76	80.851	Drosophila_melanogaster
ENSGMOG00000015607	snrpd1	74	96.591	ENSETEG00000011689	SNRPD1	74	96.591	Echinops_telfairi
ENSGMOG00000015607	snrpd1	94	92.857	ENSEBUG00000003170	snrpd1	94	92.857	Eptatretus_burgeri
ENSGMOG00000015607	snrpd1	94	97.321	ENSEASG00005002433	SNRPD1	100	97.321	Equus_asinus_asinus
ENSGMOG00000015607	snrpd1	94	97.321	ENSECAG00000014373	SNRPD1	100	97.321	Equus_caballus
ENSGMOG00000015607	snrpd1	75	96.629	ENSEEUG00000004987	SNRPD1	100	96.629	Erinaceus_europaeus
ENSGMOG00000015607	snrpd1	93	88.288	ENSELUG00000000088	snrpd1	79	98.936	Esox_lucius
ENSGMOG00000015607	snrpd1	100	97.479	ENSFCAG00000012352	SNRPD1	100	97.479	Felis_catus
ENSGMOG00000015607	snrpd1	94	97.321	ENSFALG00000002646	SNRPD1	100	97.321	Ficedula_albicollis
ENSGMOG00000015607	snrpd1	100	97.479	ENSGALG00000041334	SNRPD1	100	97.479	Gallus_gallus
ENSGMOG00000015607	snrpd1	100	99.160	ENSGAFG00000011171	snrpd1	100	99.160	Gambusia_affinis
ENSGMOG00000015607	snrpd1	100	100.000	ENSGACG00000005201	SNRPD1	100	100.000	Gasterosteus_aculeatus
ENSGMOG00000015607	snrpd1	100	97.479	ENSGAGG00000011197	SNRPD1	100	97.479	Gopherus_agassizii
ENSGMOG00000015607	snrpd1	100	97.479	ENSGGOG00000041053	SNRPD1	100	97.479	Gorilla_gorilla
ENSGMOG00000015607	snrpd1	81	91.667	ENSGGOG00000026706	-	80	91.667	Gorilla_gorilla
ENSGMOG00000015607	snrpd1	100	99.160	ENSHBUG00000003236	snrpd1	100	99.160	Haplochromis_burtoni
ENSGMOG00000015607	snrpd1	100	97.479	ENSHGLG00000007152	SNRPD1	100	97.479	Heterocephalus_glaber_female
ENSGMOG00000015607	snrpd1	100	97.479	ENSHGLG00100008618	SNRPD1	100	97.479	Heterocephalus_glaber_male
ENSGMOG00000015607	snrpd1	100	99.160	ENSIPUG00000003576	snrpd1	100	99.160	Ictalurus_punctatus
ENSGMOG00000015607	snrpd1	100	97.479	ENSSTOG00000000485	SNRPD1	100	97.479	Ictidomys_tridecemlineatus
ENSGMOG00000015607	snrpd1	100	97.479	ENSJJAG00000017698	Snrpd1	100	97.479	Jaculus_jaculus
ENSGMOG00000015607	snrpd1	100	99.160	ENSKMAG00000005987	snrpd1	100	99.160	Kryptolebias_marmoratus
ENSGMOG00000015607	snrpd1	100	99.160	ENSLBEG00000003327	snrpd1	100	99.160	Labrus_bergylta
ENSGMOG00000015607	snrpd1	100	97.479	ENSLACG00000001955	SNRPD1	100	97.479	Latimeria_chalumnae
ENSGMOG00000015607	snrpd1	98	96.581	ENSLOCG00000002003	snrpd1	100	96.581	Lepisosteus_oculatus
ENSGMOG00000015607	snrpd1	93	95.495	ENSLAFG00000005819	SNRPD1	94	95.495	Loxodonta_africana
ENSGMOG00000015607	snrpd1	100	97.479	ENSMFAG00000042080	SNRPD1	100	97.479	Macaca_fascicularis
ENSGMOG00000015607	snrpd1	96	97.368	ENSMMUG00000003992	SNRPD1	97	97.368	Macaca_mulatta
ENSGMOG00000015607	snrpd1	100	97.479	ENSMNEG00000041296	SNRPD1	100	97.479	Macaca_nemestrina
ENSGMOG00000015607	snrpd1	100	97.479	ENSMLEG00000028659	SNRPD1	100	97.479	Mandrillus_leucophaeus
ENSGMOG00000015607	snrpd1	100	99.160	ENSMAMG00000012971	snrpd1	100	99.160	Mastacembelus_armatus
ENSGMOG00000015607	snrpd1	100	99.160	ENSMZEG00005004685	snrpd1	100	99.160	Maylandia_zebra
ENSGMOG00000015607	snrpd1	97	97.391	ENSMGAG00000011598	SNRPD1	95	97.391	Meleagris_gallopavo
ENSGMOG00000015607	snrpd1	82	91.753	ENSMAUG00000006829	-	62	91.753	Mesocricetus_auratus
ENSGMOG00000015607	snrpd1	81	80.208	ENSMAUG00000016502	-	86	80.208	Mesocricetus_auratus
ENSGMOG00000015607	snrpd1	81	80.208	ENSMAUG00000016467	-	86	80.208	Mesocricetus_auratus
ENSGMOG00000015607	snrpd1	100	97.479	ENSMICG00000044066	SNRPD1	100	97.479	Microcebus_murinus
ENSGMOG00000015607	snrpd1	100	97.479	ENSMOCG00000017367	Snrpd1	100	97.479	Microtus_ochrogaster
ENSGMOG00000015607	snrpd1	100	99.160	ENSMMOG00000019089	snrpd1	100	99.160	Mola_mola
ENSGMOG00000015607	snrpd1	100	97.479	ENSMODG00000021487	SNRPD1	100	97.479	Monodelphis_domestica
ENSGMOG00000015607	snrpd1	100	99.160	ENSMALG00000014459	snrpd1	100	99.160	Monopterus_albus
ENSGMOG00000015607	snrpd1	100	97.479	MGP_CAROLIEiJ_G0021994	Snrpd1	100	97.479	Mus_caroli
ENSGMOG00000015607	snrpd1	100	97.479	ENSMUSG00000002477	Snrpd1	100	97.479	Mus_musculus
ENSGMOG00000015607	snrpd1	100	97.479	MGP_PahariEiJ_G0018731	Snrpd1	100	97.479	Mus_pahari
ENSGMOG00000015607	snrpd1	100	97.479	MGP_SPRETEiJ_G0022910	Snrpd1	100	97.479	Mus_spretus
ENSGMOG00000015607	snrpd1	100	96.639	ENSMPUG00000020041	-	100	96.639	Mustela_putorius_furo
ENSGMOG00000015607	snrpd1	98	95.726	ENSMPUG00000005567	-	100	95.726	Mustela_putorius_furo
ENSGMOG00000015607	snrpd1	96	96.491	ENSMLUG00000009124	SNRPD1	88	96.491	Myotis_lucifugus
ENSGMOG00000015607	snrpd1	100	97.479	ENSNGAG00000023946	Snrpd1	100	97.479	Nannospalax_galili
ENSGMOG00000015607	snrpd1	79	98.936	ENSNBRG00000012119	snrpd1	78	98.936	Neolamprologus_brichardi
ENSGMOG00000015607	snrpd1	100	94.958	ENSNLEG00000031430	SNRPD1	100	94.958	Nomascus_leucogenys
ENSGMOG00000015607	snrpd1	100	97.479	ENSODEG00000005764	SNRPD1	100	97.479	Octodon_degus
ENSGMOG00000015607	snrpd1	100	99.160	ENSONIG00000002486	snrpd1	100	99.160	Oreochromis_niloticus
ENSGMOG00000015607	snrpd1	82	86.735	ENSOANG00000004638	-	82	86.735	Ornithorhynchus_anatinus
ENSGMOG00000015607	snrpd1	98	95.726	ENSOCUG00000023761	-	100	95.726	Oryctolagus_cuniculus
ENSGMOG00000015607	snrpd1	100	96.639	ENSOCUG00000014399	-	100	96.639	Oryctolagus_cuniculus
ENSGMOG00000015607	snrpd1	94	99.107	ENSORLG00000012516	snrpd1	100	99.107	Oryzias_latipes
ENSGMOG00000015607	snrpd1	100	99.160	ENSORLG00020005743	snrpd1	100	99.160	Oryzias_latipes_hni
ENSGMOG00000015607	snrpd1	100	99.160	ENSORLG00015013402	snrpd1	100	99.160	Oryzias_latipes_hsok
ENSGMOG00000015607	snrpd1	100	99.160	ENSOMEG00000011571	snrpd1	100	99.160	Oryzias_melastigma
ENSGMOG00000015607	snrpd1	100	94.118	ENSOGAG00000007833	SNRPD1	100	94.118	Otolemur_garnettii
ENSGMOG00000015607	snrpd1	100	92.437	ENSOARG00000003413	-	85	92.437	Ovis_aries
ENSGMOG00000015607	snrpd1	100	97.479	ENSPPAG00000042593	SNRPD1	100	97.479	Pan_paniscus
ENSGMOG00000015607	snrpd1	94	71.429	ENSPPRG00000005009	-	92	71.429	Panthera_pardus
ENSGMOG00000015607	snrpd1	100	97.479	ENSPPRG00000002399	SNRPD1	100	97.479	Panthera_pardus
ENSGMOG00000015607	snrpd1	96	97.368	ENSPTIG00000013206	SNRPD1	100	97.368	Panthera_tigris_altaica
ENSGMOG00000015607	snrpd1	86	91.176	ENSPTRG00000050159	-	87	91.176	Pan_troglodytes
ENSGMOG00000015607	snrpd1	100	97.479	ENSPTRG00000009909	SNRPD1	100	97.479	Pan_troglodytes
ENSGMOG00000015607	snrpd1	100	97.479	ENSPANG00000023478	SNRPD1	100	97.479	Papio_anubis
ENSGMOG00000015607	snrpd1	94	98.214	ENSPKIG00000021610	snrpd1	100	98.214	Paramormyrops_kingsleyae
ENSGMOG00000015607	snrpd1	100	97.479	ENSPKIG00000003985	SNRPD1	100	97.479	Paramormyrops_kingsleyae
ENSGMOG00000015607	snrpd1	100	99.160	ENSPMGG00000001862	snrpd1	100	99.160	Periophthalmus_magnuspinnatus
ENSGMOG00000015607	snrpd1	100	97.479	ENSPEMG00000014773	-	100	97.479	Peromyscus_maniculatus_bairdii
ENSGMOG00000015607	snrpd1	86	82.692	ENSPMAG00000003938	-	85	82.692	Petromyzon_marinus
ENSGMOG00000015607	snrpd1	100	97.479	ENSPCIG00000020320	SNRPD1	100	97.479	Phascolarctos_cinereus
ENSGMOG00000015607	snrpd1	100	94.118	ENSPFOG00000012448	SNRPD1	100	94.118	Poecilia_formosa
ENSGMOG00000015607	snrpd1	100	94.118	ENSPLAG00000006738	snrpd1	100	94.118	Poecilia_latipinna
ENSGMOG00000015607	snrpd1	100	94.118	ENSPMEG00000021942	snrpd1	100	94.118	Poecilia_mexicana
ENSGMOG00000015607	snrpd1	100	99.160	ENSPREG00000007094	snrpd1	100	99.160	Poecilia_reticulata
ENSGMOG00000015607	snrpd1	100	97.479	ENSPPYG00000025874	SNRPD1	100	97.479	Pongo_abelii
ENSGMOG00000015607	snrpd1	100	97.479	ENSPCOG00000013327	SNRPD1	100	97.479	Propithecus_coquereli
ENSGMOG00000015607	snrpd1	100	97.479	ENSPVAG00000005511	SNRPD1	80	97.479	Pteropus_vampyrus
ENSGMOG00000015607	snrpd1	100	99.160	ENSPNAG00000017824	snrpd1	100	99.160	Pygocentrus_nattereri
ENSGMOG00000015607	snrpd1	100	97.479	ENSRNOG00000013714	Snrpd1	100	97.479	Rattus_norvegicus
ENSGMOG00000015607	snrpd1	100	97.479	ENSRBIG00000022996	SNRPD1	100	97.479	Rhinopithecus_bieti
ENSGMOG00000015607	snrpd1	100	97.479	ENSRROG00000027640	SNRPD1	100	97.479	Rhinopithecus_roxellana
ENSGMOG00000015607	snrpd1	100	97.479	ENSSBOG00000020998	SNRPD1	100	97.479	Saimiri_boliviensis_boliviensis
ENSGMOG00000015607	snrpd1	100	97.479	ENSSHAG00000011791	SNRPD1	100	97.479	Sarcophilus_harrisii
ENSGMOG00000015607	snrpd1	100	98.319	ENSSFOG00015022253	-	100	98.319	Scleropages_formosus
ENSGMOG00000015607	snrpd1	100	98.319	ENSSFOG00015008809	-	100	98.319	Scleropages_formosus
ENSGMOG00000015607	snrpd1	100	98.319	ENSSMAG00000008765	snrpd1	100	98.319	Scophthalmus_maximus
ENSGMOG00000015607	snrpd1	97	97.414	ENSSDUG00000010521	snrpd1	98	97.414	Seriola_dumerili
ENSGMOG00000015607	snrpd1	100	99.160	ENSSLDG00000011858	snrpd1	100	99.160	Seriola_lalandi_dorsalis
ENSGMOG00000015607	snrpd1	56	97.015	ENSSARG00000004271	SNRPD1	100	97.015	Sorex_araneus
ENSGMOG00000015607	snrpd1	100	97.479	ENSSPUG00000002824	SNRPD1	100	97.479	Sphenodon_punctatus
ENSGMOG00000015607	snrpd1	94	99.107	ENSSPAG00000015229	snrpd1	100	99.107	Stegastes_partitus
ENSGMOG00000015607	snrpd1	100	97.479	ENSSSCG00000003701	SNRPD1	100	97.479	Sus_scrofa
ENSGMOG00000015607	snrpd1	97	97.391	ENSTGUG00000005095	SNRPD1	97	97.391	Taeniopygia_guttata
ENSGMOG00000015607	snrpd1	94	99.107	ENSTRUG00000008977	snrpd1	100	99.107	Takifugu_rubripes
ENSGMOG00000015607	snrpd1	81	94.792	ENSTNIG00000001224	snrpd1	92	94.792	Tetraodon_nigroviridis
ENSGMOG00000015607	snrpd1	74	96.591	ENSTBEG00000013776	SNRPD1	100	96.591	Tupaia_belangeri
ENSGMOG00000015607	snrpd1	97	97.391	ENSTTRG00000002654	SNRPD1	100	97.391	Tursiops_truncatus
ENSGMOG00000015607	snrpd1	96	97.368	ENSUAMG00000013431	SNRPD1	97	97.368	Ursus_americanus
ENSGMOG00000015607	snrpd1	100	97.479	ENSUMAG00000019740	SNRPD1	100	97.479	Ursus_maritimus
ENSGMOG00000015607	snrpd1	100	97.479	ENSVPAG00000010056	SNRPD1	80	97.479	Vicugna_pacos
ENSGMOG00000015607	snrpd1	94	97.321	ENSVVUG00000004009	SNRPD1	100	97.321	Vulpes_vulpes
ENSGMOG00000015607	snrpd1	94	95.536	ENSXETG00000027354	snrpd1	94	95.536	Xenopus_tropicalis
ENSGMOG00000015607	snrpd1	100	99.160	ENSXCOG00000020108	snrpd1	100	99.160	Xiphophorus_couchianus
ENSGMOG00000015607	snrpd1	100	99.160	ENSXMAG00000003368	snrpd1	100	99.160	Xiphophorus_maculatus