EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSGMOG00000015622 (Gene tree)
Gene ID: -
Gene Symbol: prpf6
Alias: c20orf14|fc12b02|wu:fa05f07|wu:fc12b02|zgc:65913
Full Name: PRP6 pre-mRNA processing factor 6 homolog (S. cerevisiae)
Gene Type: protein_coding
Species: Gadus_morhua
Status: putative
Strand: Minus strand
Length: 18046 bases
Position: chrGeneScaffold_368:57726-75771
Accession: ZDB-GENE-030131-2575
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSGMOP00000016770	PRP1_N	PF06424.12	4.6e-57	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSGMOT00000017189	-	2817	-	ENSGMOP00000016770	938 (aa)	-	UPI00023F35F8

Gene Model

Click here to download ENSGMOG00000015622's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSGMOG00000015622's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSGMOG00000015622	prpf6	99	88.584	ENSG00000101161	PRPF6	100	88.584	Homo_sapiens
ENSGMOG00000015622	prpf6	99	93.849	ENSAPOG00000010395	prpf6	97	94.380	Acanthochromis_polyacanthus
ENSGMOG00000015622	prpf6	99	88.068	ENSAMEG00000001916	PRPF6	99	88.068	Ailuropoda_melanoleuca
ENSGMOG00000015622	prpf6	99	93.637	ENSACIG00000019862	prpf6	97	94.168	Amphilophus_citrinellus
ENSGMOG00000015622	prpf6	99	93.955	ENSAOCG00000012988	prpf6	97	94.486	Amphiprion_ocellaris
ENSGMOG00000015622	prpf6	99	87.393	ENSAPEG00000008301	prpf6	100	88.248	Amphiprion_percula
ENSGMOG00000015622	prpf6	99	93.531	ENSATEG00000005581	prpf6	97	94.062	Anabas_testudineus
ENSGMOG00000015622	prpf6	99	89.429	ENSACAG00000006464	PRPF6	95	89.429	Anolis_carolinensis
ENSGMOG00000015622	prpf6	99	88.689	ENSANAG00000012661	PRPF6	100	89.110	Aotus_nancymaae
ENSGMOG00000015622	prpf6	99	93.531	ENSACLG00000025875	prpf6	97	94.062	Astatotilapia_calliptera
ENSGMOG00000015622	prpf6	99	92.373	ENSAMXG00000001929	prpf6	97	92.910	Astyanax_mexicanus
ENSGMOG00000015622	prpf6	99	89.218	ENSBTAG00000011656	PRPF6	100	89.218	Bos_taurus
ENSGMOG00000015622	prpf6	99	88.689	ENSCJAG00000010616	PRPF6	100	88.689	Callithrix_jacchus
ENSGMOG00000015622	prpf6	99	89.112	ENSCAFG00000013165	PRPF6	100	89.112	Canis_familiaris
ENSGMOG00000015622	prpf6	99	89.112	ENSCAFG00020002050	PRPF6	100	89.112	Canis_lupus_dingo
ENSGMOG00000015622	prpf6	99	89.218	ENSCHIG00000018187	PRPF6	100	89.218	Capra_hircus
ENSGMOG00000015622	prpf6	99	89.218	ENSTSYG00000007814	PRPF6	100	89.218	Carlito_syrichta
ENSGMOG00000015622	prpf6	97	88.395	ENSCAPG00000015077	PRPF6	100	88.395	Cavia_aperea
ENSGMOG00000015622	prpf6	99	89.535	ENSCPOG00000007518	PRPF6	100	89.535	Cavia_porcellus
ENSGMOG00000015622	prpf6	99	85.624	ENSCCAG00000024564	PRPF6	100	85.624	Cebus_capucinus
ENSGMOG00000015622	prpf6	99	88.689	ENSCATG00000037473	PRPF6	100	88.689	Cercocebus_atys
ENSGMOG00000015622	prpf6	99	86.152	ENSCLAG00000003854	PRPF6	100	86.152	Chinchilla_lanigera
ENSGMOG00000015622	prpf6	99	85.428	ENSCSAG00000016742	PRPF6	100	85.428	Chlorocebus_sabaeus
ENSGMOG00000015622	prpf6	84	75.122	ENSCHOG00000003315	-	99	75.082	Choloepus_hoffmanni
ENSGMOG00000015622	prpf6	99	89.630	ENSCPBG00000013964	PRPF6	96	89.630	Chrysemys_picta_bellii
ENSGMOG00000015622	prpf6	99	72.169	ENSCING00000008817	-	99	72.169	Ciona_intestinalis
ENSGMOG00000015622	prpf6	99	88.478	ENSCANG00000038230	PRPF6	100	88.478	Colobus_angolensis_palliatus
ENSGMOG00000015622	prpf6	99	89.535	ENSCGRG00001022666	Prpf6	100	89.535	Cricetulus_griseus_chok1gshd
ENSGMOG00000015622	prpf6	99	87.714	ENSCSEG00000018561	prpf6	100	88.248	Cynoglossus_semilaevis
ENSGMOG00000015622	prpf6	99	93.531	ENSCVAG00000010550	prpf6	97	94.062	Cyprinodon_variegatus
ENSGMOG00000015622	prpf6	99	91.843	ENSDARG00000091367	prpf6	100	92.373	Danio_rerio
ENSGMOG00000015622	prpf6	99	89.323	ENSDNOG00000040544	PRPF6	100	89.323	Dasypus_novemcinctus
ENSGMOG00000015622	prpf6	90	89.082	ENSDORG00000005406	Prpf6	100	89.082	Dipodomys_ordii
ENSGMOG00000015622	prpf6	99	70.950	FBgn0036828	CG6841	99	70.784	Drosophila_melanogaster
ENSGMOG00000015622	prpf6	85	89.912	ENSETEG00000004447	PRPF6	85	89.912	Echinops_telfairi
ENSGMOG00000015622	prpf6	99	84.127	ENSEBUG00000008835	prpf6	100	84.127	Eptatretus_burgeri
ENSGMOG00000015622	prpf6	99	90.032	ENSEASG00005023115	PRPF6	100	89.936	Equus_asinus_asinus
ENSGMOG00000015622	prpf6	99	85.201	ENSECAG00000013983	PRPF6	100	85.201	Equus_caballus
ENSGMOG00000015622	prpf6	89	95.833	ENSEEUG00000000180	PRPF6	81	95.833	Erinaceus_europaeus
ENSGMOG00000015622	prpf6	99	93.743	ENSELUG00000001945	prpf6	94	93.743	Esox_lucius
ENSGMOG00000015622	prpf6	99	89.218	ENSFCAG00000001183	PRPF6	100	89.218	Felis_catus
ENSGMOG00000015622	prpf6	99	83.652	ENSFALG00000006046	-	97	83.652	Ficedula_albicollis
ENSGMOG00000015622	prpf6	99	88.935	ENSFALG00000010326	-	98	88.935	Ficedula_albicollis
ENSGMOG00000015622	prpf6	99	88.055	ENSFDAG00000006451	PRPF6	100	88.952	Fukomys_damarensis
ENSGMOG00000015622	prpf6	99	94.380	ENSFHEG00000000560	prpf6	97	94.380	Fundulus_heteroclitus
ENSGMOG00000015622	prpf6	99	89.429	ENSGALG00000006001	PRPF6	100	89.429	Gallus_gallus
ENSGMOG00000015622	prpf6	99	88.865	ENSGAFG00000021109	prpf6	97	89.396	Gambusia_affinis
ENSGMOG00000015622	prpf6	99	94.989	ENSGACG00000002576	prpf6	99	94.989	Gasterosteus_aculeatus
ENSGMOG00000015622	prpf6	99	89.735	ENSGAGG00000008653	PRPF6	96	89.735	Gopherus_agassizii
ENSGMOG00000015622	prpf6	99	88.584	ENSGGOG00000016876	PRPF6	100	88.584	Gorilla_gorilla
ENSGMOG00000015622	prpf6	99	93.531	ENSHBUG00000004496	prpf6	97	94.062	Haplochromis_burtoni
ENSGMOG00000015622	prpf6	99	89.429	ENSHGLG00000009222	PRPF6	100	89.429	Heterocephalus_glaber_female
ENSGMOG00000015622	prpf6	97	89.262	ENSHGLG00100016600	PRPF6	100	89.262	Heterocephalus_glaber_male
ENSGMOG00000015622	prpf6	99	92.577	ENSHCOG00000011513	prpf6	97	93.107	Hippocampus_comes
ENSGMOG00000015622	prpf6	100	93.213	ENSIPUG00000004912	prpf6	97	93.637	Ictalurus_punctatus
ENSGMOG00000015622	prpf6	99	87.117	ENSSTOG00000002922	PRPF6	100	86.484	Ictidomys_tridecemlineatus
ENSGMOG00000015622	prpf6	99	89.535	ENSJJAG00000000836	Prpf6	100	89.535	Jaculus_jaculus
ENSGMOG00000015622	prpf6	99	93.425	ENSKMAG00000017800	prpf6	97	93.955	Kryptolebias_marmoratus
ENSGMOG00000015622	prpf6	99	94.168	ENSLBEG00000012582	prpf6	97	94.168	Labrus_bergylta
ENSGMOG00000015622	prpf6	99	91.915	ENSLOCG00000004827	prpf6	96	90.532	Lepisosteus_oculatus
ENSGMOG00000015622	prpf6	99	89.006	ENSLAFG00000005272	PRPF6	100	89.006	Loxodonta_africana
ENSGMOG00000015622	prpf6	99	88.478	ENSMFAG00000037542	PRPF6	100	88.478	Macaca_fascicularis
ENSGMOG00000015622	prpf6	99	82.893	ENSMMUG00000015558	PRPF6	98	89.347	Macaca_mulatta
ENSGMOG00000015622	prpf6	99	77.566	ENSMNEG00000045555	PRPF6	100	77.566	Macaca_nemestrina
ENSGMOG00000015622	prpf6	99	93.637	ENSMAMG00000010718	prpf6	97	94.168	Mastacembelus_armatus
ENSGMOG00000015622	prpf6	93	93.158	ENSMZEG00005026539	prpf6	100	93.729	Maylandia_zebra
ENSGMOG00000015622	prpf6	99	93.008	ENSMZEG00005015261	-	100	93.538	Maylandia_zebra
ENSGMOG00000015622	prpf6	97	89.479	ENSMGAG00000006634	PRPF6	100	89.479	Meleagris_gallopavo
ENSGMOG00000015622	prpf6	99	89.535	ENSMAUG00000013969	Prpf6	100	89.535	Mesocricetus_auratus
ENSGMOG00000015622	prpf6	87	88.029	ENSMICG00000017793	PRPF6	98	88.063	Microcebus_murinus
ENSGMOG00000015622	prpf6	99	89.535	ENSMOCG00000001701	Prpf6	100	89.535	Microtus_ochrogaster
ENSGMOG00000015622	prpf6	99	93.162	ENSMMOG00000020419	prpf6	100	93.697	Mola_mola
ENSGMOG00000015622	prpf6	98	89.461	ENSMODG00000017051	PRPF6	99	89.461	Monodelphis_domestica
ENSGMOG00000015622	prpf6	98	94.060	ENSMALG00000000089	prpf6	100	94.060	Monopterus_albus
ENSGMOG00000015622	prpf6	99	83.298	MGP_CAROLIEiJ_G0024814	Prpf6	100	88.889	Mus_caroli
ENSGMOG00000015622	prpf6	99	89.535	ENSMUSG00000002455	Prpf6	100	89.535	Mus_musculus
ENSGMOG00000015622	prpf6	99	89.535	MGP_PahariEiJ_G0026262	Prpf6	100	89.535	Mus_pahari
ENSGMOG00000015622	prpf6	99	89.535	MGP_SPRETEiJ_G0025741	Prpf6	100	89.535	Mus_spretus
ENSGMOG00000015622	prpf6	90	89.130	ENSMPUG00000008673	PRPF6	99	88.507	Mustela_putorius_furo
ENSGMOG00000015622	prpf6	99	89.641	ENSNGAG00000003365	Prpf6	100	89.641	Nannospalax_galili
ENSGMOG00000015622	prpf6	99	93.637	ENSNBRG00000015025	prpf6	97	94.168	Neolamprologus_brichardi
ENSGMOG00000015622	prpf6	99	88.818	ENSNLEG00000010208	PRPF6	100	88.818	Nomascus_leucogenys
ENSGMOG00000015622	prpf6	99	82.129	ENSMEUG00000009824	-	90	82.411	Notamacropus_eugenii
ENSGMOG00000015622	prpf6	99	83.932	ENSODEG00000004841	PRPF6	100	83.932	Octodon_degus
ENSGMOG00000015622	prpf6	99	93.531	ENSONIG00000017406	prpf6	97	94.062	Oreochromis_niloticus
ENSGMOG00000015622	prpf6	99	89.535	ENSOANG00000004920	PRPF6	100	89.535	Ornithorhynchus_anatinus
ENSGMOG00000015622	prpf6	98	87.620	ENSOCUG00000014151	PRPF6	100	87.620	Oryctolagus_cuniculus
ENSGMOG00000015622	prpf6	99	93.637	ENSORLG00000009592	prpf6	97	93.637	Oryzias_latipes
ENSGMOG00000015622	prpf6	99	93.531	ENSORLG00020001458	prpf6	97	93.531	Oryzias_latipes_hni
ENSGMOG00000015622	prpf6	99	93.531	ENSORLG00015018762	prpf6	97	93.531	Oryzias_latipes_hsok
ENSGMOG00000015622	prpf6	99	92.895	ENSOMEG00000012174	prpf6	97	93.425	Oryzias_melastigma
ENSGMOG00000015622	prpf6	99	82.049	ENSOGAG00000007573	PRPF6	100	82.049	Otolemur_garnettii
ENSGMOG00000015622	prpf6	99	88.795	ENSOARG00000008776	PRPF6	99	88.795	Ovis_aries
ENSGMOG00000015622	prpf6	99	88.584	ENSPPAG00000008686	PRPF6	100	88.584	Pan_paniscus
ENSGMOG00000015622	prpf6	99	89.218	ENSPPRG00000008497	PRPF6	100	89.218	Panthera_pardus
ENSGMOG00000015622	prpf6	97	89.046	ENSPTIG00000011184	PRPF6	97	89.046	Panthera_tigris_altaica
ENSGMOG00000015622	prpf6	99	88.584	ENSPTRG00000013765	PRPF6	100	88.584	Pan_troglodytes
ENSGMOG00000015622	prpf6	99	88.266	ENSPANG00000024135	PRPF6	100	88.266	Papio_anubis
ENSGMOG00000015622	prpf6	99	92.660	ENSPKIG00000005627	prpf6	99	92.660	Paramormyrops_kingsleyae
ENSGMOG00000015622	prpf6	91	89.437	ENSPSIG00000007717	PRPF6	100	88.952	Pelodiscus_sinensis
ENSGMOG00000015622	prpf6	99	92.161	ENSPMGG00000008925	prpf6	97	92.373	Periophthalmus_magnuspinnatus
ENSGMOG00000015622	prpf6	99	89.535	ENSPEMG00000016036	Prpf6	100	89.535	Peromyscus_maniculatus_bairdii
ENSGMOG00000015622	prpf6	99	86.596	ENSPMAG00000006144	prpf6	99	86.596	Petromyzon_marinus
ENSGMOG00000015622	prpf6	99	89.641	ENSPCIG00000017909	PRPF6	100	89.641	Phascolarctos_cinereus
ENSGMOG00000015622	prpf6	99	93.340	ENSPFOG00000006431	prpf6	96	93.869	Poecilia_formosa
ENSGMOG00000015622	prpf6	99	93.319	ENSPLAG00000005974	prpf6	97	93.849	Poecilia_latipinna
ENSGMOG00000015622	prpf6	99	93.531	ENSPMEG00000009977	prpf6	97	94.062	Poecilia_mexicana
ENSGMOG00000015622	prpf6	99	93.637	ENSPREG00000017993	prpf6	92	94.168	Poecilia_reticulata
ENSGMOG00000015622	prpf6	99	88.055	ENSPPYG00000011256	PRPF6	100	88.055	Pongo_abelii
ENSGMOG00000015622	prpf6	94	90.438	ENSPCAG00000006536	PRPF6	88	90.438	Procavia_capensis
ENSGMOG00000015622	prpf6	99	88.584	ENSPCOG00000016881	PRPF6	100	88.584	Propithecus_coquereli
ENSGMOG00000015622	prpf6	99	83.298	ENSPVAG00000014316	PRPF6	100	83.298	Pteropus_vampyrus
ENSGMOG00000015622	prpf6	99	80.806	ENSPNYG00000001939	prpf6	96	81.336	Pundamilia_nyererei
ENSGMOG00000015622	prpf6	99	92.479	ENSPNAG00000015606	prpf6	97	93.016	Pygocentrus_nattereri
ENSGMOG00000015622	prpf6	99	89.429	ENSRNOG00000051498	Prpf6	100	89.429	Rattus_norvegicus
ENSGMOG00000015622	prpf6	99	88.478	ENSRBIG00000043613	PRPF6	100	88.478	Rhinopithecus_bieti
ENSGMOG00000015622	prpf6	99	85.474	ENSRROG00000040969	PRPF6	98	87.993	Rhinopithecus_roxellana
ENSGMOG00000015622	prpf6	90	84.912	ENSSBOG00000020632	PRPF6	93	83.190	Saimiri_boliviensis_boliviensis
ENSGMOG00000015622	prpf6	99	89.641	ENSSHAG00000016810	PRPF6	100	89.641	Sarcophilus_harrisii
ENSGMOG00000015622	prpf6	98	93.011	ENSSFOG00015020859	prpf6	100	93.011	Scleropages_formosus
ENSGMOG00000015622	prpf6	99	94.910	ENSSMAG00000008112	prpf6	97	94.910	Scophthalmus_maximus
ENSGMOG00000015622	prpf6	99	93.849	ENSSDUG00000016142	prpf6	97	94.380	Seriola_dumerili
ENSGMOG00000015622	prpf6	99	93.849	ENSSLDG00000025283	prpf6	97	94.380	Seriola_lalandi_dorsalis
ENSGMOG00000015622	prpf6	91	89.133	ENSSPUG00000018260	PRPF6	100	88.649	Sphenodon_punctatus
ENSGMOG00000015622	prpf6	99	93.955	ENSSPAG00000015850	prpf6	97	94.486	Stegastes_partitus
ENSGMOG00000015622	prpf6	99	88.795	ENSSSCG00000029119	PRPF6	100	88.162	Sus_scrofa
ENSGMOG00000015622	prpf6	99	89.463	ENSTGUG00000007221	PRPF6	100	89.463	Taeniopygia_guttata
ENSGMOG00000015622	prpf6	99	93.001	ENSTRUG00000002920	prpf6	97	93.531	Takifugu_rubripes
ENSGMOG00000015622	prpf6	99	86.929	ENSTNIG00000017873	prpf6	100	87.460	Tetraodon_nigroviridis
ENSGMOG00000015622	prpf6	88	88.889	ENSTBEG00000005348	PRPF6	85	88.889	Tupaia_belangeri
ENSGMOG00000015622	prpf6	99	89.006	ENSTTRG00000013068	PRPF6	100	89.006	Tursiops_truncatus
ENSGMOG00000015622	prpf6	97	87.527	ENSUMAG00000021631	PRPF6	98	87.459	Ursus_maritimus
ENSGMOG00000015622	prpf6	99	89.112	ENSVVUG00000014948	PRPF6	100	89.112	Vulpes_vulpes
ENSGMOG00000015622	prpf6	99	89.735	ENSXETG00000012054	prpf6	97	89.735	Xenopus_tropicalis
ENSGMOG00000015622	prpf6	99	93.425	ENSXCOG00000008082	prpf6	97	93.955	Xiphophorus_couchianus
ENSGMOG00000015622	prpf6	99	93.425	ENSXMAG00000015581	prpf6	97	93.955	Xiphophorus_maculatus