EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSGMOG00000015834 (Gene tree)
Gene ID: -
Gene Symbol: lsg1
Alias: fb99b06|wu:fb99b06|zgc:76988
Full Name: large 60S subunit nuclear export GTPase 1
Gene Type: protein_coding
Species: Gadus_morhua
Status: putative
Strand: Minus strand
Length: 7058 bases
Position: chrGeneScaffold_1780:191554-198611
Accession: ZDB-GENE-030131-2184
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSGMOP00000017007	MMR_HSR1	PF01926.23	5.8e-13	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSGMOT00000017432	-	1908	-	ENSGMOP00000017007	635 (aa)	-	UPI00023F3549

Gene Model

Click here to download ENSGMOG00000015834's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSGMOG00000015834's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSGMOG00000015834	lsg1	87	71.486	ENSG00000041802	LSG1	90	75.610	Homo_sapiens
ENSGMOG00000015834	lsg1	90	80.000	ENSAPOG00000009694	lsg1	99	71.086	Acanthochromis_polyacanthus
ENSGMOG00000015834	lsg1	88	70.635	ENSAMEG00000009343	LSG1	82	72.269	Ailuropoda_melanoleuca
ENSGMOG00000015834	lsg1	98	70.447	ENSACIG00000012406	lsg1	98	70.767	Amphilophus_citrinellus
ENSGMOG00000015834	lsg1	100	70.781	ENSAOCG00000016066	lsg1	99	71.885	Amphiprion_ocellaris
ENSGMOG00000015834	lsg1	100	71.719	ENSAPEG00000003252	lsg1	99	71.885	Amphiprion_percula
ENSGMOG00000015834	lsg1	87	79.151	ENSATEG00000011794	lsg1	98	71.704	Anabas_testudineus
ENSGMOG00000015834	lsg1	94	58.560	ENSACAG00000004222	LSG1	85	72.247	Anolis_carolinensis
ENSGMOG00000015834	lsg1	88	70.079	ENSANAG00000021153	LSG1	82	71.667	Aotus_nancymaae
ENSGMOG00000015834	lsg1	91	76.623	ENSACLG00000000520	lsg1	98	68.955	Astatotilapia_calliptera
ENSGMOG00000015834	lsg1	100	69.029	ENSAMXG00000008271	lsg1	98	69.085	Astyanax_mexicanus
ENSGMOG00000015834	lsg1	99	60.671	ENSBTAG00000008461	LSG1	98	61.059	Bos_taurus
ENSGMOG00000015834	lsg1	74	43.651	WBGene00016907	C53H9.2	85	50.505	Caenorhabditis_elegans
ENSGMOG00000015834	lsg1	88	69.685	ENSCJAG00000013962	LSG1	82	71.250	Callithrix_jacchus
ENSGMOG00000015834	lsg1	81	78.404	ENSCAFG00000013445	LSG1	82	78.404	Canis_familiaris
ENSGMOG00000015834	lsg1	86	71.888	ENSCAFG00020002216	LSG1	82	77.885	Canis_lupus_dingo
ENSGMOG00000015834	lsg1	88	71.032	ENSCHIG00000015769	LSG1	98	61.025	Capra_hircus
ENSGMOG00000015834	lsg1	88	69.667	ENSTSYG00000001447	LSG1	82	70.325	Carlito_syrichta
ENSGMOG00000015834	lsg1	85	68.651	ENSCAPG00000009856	LSG1	99	60.461	Cavia_aperea
ENSGMOG00000015834	lsg1	88	69.685	ENSCCAG00000035744	LSG1	82	71.250	Cebus_capucinus
ENSGMOG00000015834	lsg1	87	71.429	ENSCATG00000042060	LSG1	82	69.748	Cercocebus_atys
ENSGMOG00000015834	lsg1	87	70.238	ENSCSAG00000008796	LSG1	75	71.849	Chlorocebus_sabaeus
ENSGMOG00000015834	lsg1	90	70.724	ENSCPBG00000015941	LSG1	70	72.157	Chrysemys_picta_bellii
ENSGMOG00000015834	lsg1	67	62.209	ENSCING00000007079	-	87	62.209	Ciona_intestinalis
ENSGMOG00000015834	lsg1	73	56.566	ENSCSAVG00000002514	-	87	56.853	Ciona_savignyi
ENSGMOG00000015834	lsg1	87	70.683	ENSCANG00000030709	LSG1	81	71.915	Colobus_angolensis_palliatus
ENSGMOG00000015834	lsg1	99	61.025	ENSCGRG00001019846	Lsg1	84	71.915	Cricetulus_griseus_chok1gshd
ENSGMOG00000015834	lsg1	99	60.703	ENSCGRG00000014617	Lsg1	83	71.915	Cricetulus_griseus_crigri
ENSGMOG00000015834	lsg1	98	67.442	ENSCSEG00000008522	lsg1	90	75.465	Cynoglossus_semilaevis
ENSGMOG00000015834	lsg1	97	70.323	ENSCVAG00000002484	lsg1	98	70.305	Cyprinodon_variegatus
ENSGMOG00000015834	lsg1	100	70.479	ENSDARG00000015352	lsg1	98	70.300	Danio_rerio
ENSGMOG00000015834	lsg1	87	70.333	ENSDNOG00000006224	LSG1	81	70.333	Dasypus_novemcinctus
ENSGMOG00000015834	lsg1	86	61.290	FBgn0266284	Ns3	92	57.252	Drosophila_melanogaster
ENSGMOG00000015834	lsg1	78	66.667	ENSETEG00000003888	LSG1	70	74.000	Echinops_telfairi
ENSGMOG00000015834	lsg1	88	52.778	ENSEBUG00000003119	lsg1	73	60.847	Eptatretus_burgeri
ENSGMOG00000015834	lsg1	87	70.238	ENSEASG00005000678	LSG1	81	71.849	Equus_asinus_asinus
ENSGMOG00000015834	lsg1	87	70.238	ENSECAG00000017659	LSG1	81	71.849	Equus_caballus
ENSGMOG00000015834	lsg1	74	75.490	ENSEEUG00000015217	LSG1	59	76.768	Erinaceus_europaeus
ENSGMOG00000015834	lsg1	100	69.646	ENSELUG00000023973	lsg1	98	69.462	Esox_lucius
ENSGMOG00000015834	lsg1	91	69.868	ENSFCAG00000024957	LSG1	81	72.689	Felis_catus
ENSGMOG00000015834	lsg1	88	68.525	ENSFALG00000007210	LSG1	83	68.525	Ficedula_albicollis
ENSGMOG00000015834	lsg1	86	68.273	ENSFDAG00000017373	LSG1	83	70.213	Fukomys_damarensis
ENSGMOG00000015834	lsg1	97	68.371	ENSFHEG00000003680	lsg1	98	68.513	Fundulus_heteroclitus
ENSGMOG00000015834	lsg1	88	67.763	ENSGALG00000007058	LSG1	73	67.763	Gallus_gallus
ENSGMOG00000015834	lsg1	97	68.960	ENSGAFG00000015831	lsg1	98	69.108	Gambusia_affinis
ENSGMOG00000015834	lsg1	98	74.840	ENSGACG00000009323	lsg1	98	74.840	Gasterosteus_aculeatus
ENSGMOG00000015834	lsg1	87	71.084	ENSGGOG00000000520	LSG1	81	72.766	Gorilla_gorilla
ENSGMOG00000015834	lsg1	91	79.121	ENSHBUG00000005659	lsg1	98	69.984	Haplochromis_burtoni
ENSGMOG00000015834	lsg1	86	68.775	ENSHGLG00000017390	LSG1	98	58.075	Heterocephalus_glaber_female
ENSGMOG00000015834	lsg1	86	68.775	ENSHGLG00100018587	LSG1	98	58.075	Heterocephalus_glaber_male
ENSGMOG00000015834	lsg1	97	69.904	ENSHCOG00000016848	lsg1	98	69.889	Hippocampus_comes
ENSGMOG00000015834	lsg1	100	69.375	ENSIPUG00000008631	lsg1	98	69.010	Ictalurus_punctatus
ENSGMOG00000015834	lsg1	63	68.543	ENSSTOG00000010234	LSG1	74	68.543	Ictidomys_tridecemlineatus
ENSGMOG00000015834	lsg1	87	71.825	ENSJJAG00000015513	Lsg1	98	62.041	Jaculus_jaculus
ENSGMOG00000015834	lsg1	98	66.352	ENSKMAG00000009681	lsg1	98	66.352	Kryptolebias_marmoratus
ENSGMOG00000015834	lsg1	88	81.226	ENSLBEG00000024261	lsg1	98	72.276	Labrus_bergylta
ENSGMOG00000015834	lsg1	93	70.251	ENSLACG00000013399	LSG1	83	73.896	Latimeria_chalumnae
ENSGMOG00000015834	lsg1	86	80.658	ENSLOCG00000004918	lsg1	84	80.658	Lepisosteus_oculatus
ENSGMOG00000015834	lsg1	99	61.077	ENSLAFG00000012919	-	84	71.193	Loxodonta_africana
ENSGMOG00000015834	lsg1	87	70.635	ENSMFAG00000039903	LSG1	82	69.608	Macaca_fascicularis
ENSGMOG00000015834	lsg1	87	70.635	ENSMMUG00000010708	LSG1	82	72.269	Macaca_mulatta
ENSGMOG00000015834	lsg1	87	70.635	ENSMNEG00000031538	LSG1	81	69.967	Macaca_nemestrina
ENSGMOG00000015834	lsg1	87	70.635	ENSMLEG00000041184	LSG1	82	72.269	Mandrillus_leucophaeus
ENSGMOG00000015834	lsg1	100	68.799	ENSMAMG00000000470	lsg1	89	80.658	Mastacembelus_armatus
ENSGMOG00000015834	lsg1	91	79.121	ENSMZEG00005017865	lsg1	98	70.142	Maylandia_zebra
ENSGMOG00000015834	lsg1	76	68.108	ENSMGAG00000007050	LSG1	84	68.092	Meleagris_gallopavo
ENSGMOG00000015834	lsg1	81	69.008	ENSMAUG00000016976	Lsg1	90	60.633	Mesocricetus_auratus
ENSGMOG00000015834	lsg1	89	68.482	ENSMICG00000049087	LSG1	84	69.547	Microcebus_murinus
ENSGMOG00000015834	lsg1	99	60.976	ENSMOCG00000022136	Lsg1	98	60.559	Microtus_ochrogaster
ENSGMOG00000015834	lsg1	87	81.893	ENSMMOG00000008884	lsg1	98	69.132	Mola_mola
ENSGMOG00000015834	lsg1	98	53.313	ENSMODG00000019828	LSG1	85	65.417	Monodelphis_domestica
ENSGMOG00000015834	lsg1	91	69.767	MGP_CAROLIEiJ_G0020648	Lsg1	83	72.269	Mus_caroli
ENSGMOG00000015834	lsg1	91	69.767	ENSMUSG00000022538	Lsg1	83	72.269	Mus_musculus
ENSGMOG00000015834	lsg1	89	69.435	MGP_PahariEiJ_G0016352	Lsg1	82	71.429	Mus_pahari
ENSGMOG00000015834	lsg1	91	69.767	MGP_SPRETEiJ_G0021544	Lsg1	83	72.269	Mus_spretus
ENSGMOG00000015834	lsg1	88	70.635	ENSMPUG00000003734	LSG1	82	72.269	Mustela_putorius_furo
ENSGMOG00000015834	lsg1	86	73.092	ENSMLUG00000012548	LSG1	82	74.468	Myotis_lucifugus
ENSGMOG00000015834	lsg1	87	70.134	ENSNGAG00000021872	Lsg1	83	71.193	Nannospalax_galili
ENSGMOG00000015834	lsg1	99	60.725	ENSNLEG00000008293	LSG1	81	72.689	Nomascus_leucogenys
ENSGMOG00000015834	lsg1	63	73.469	ENSMEUG00000009041	-	74	73.469	Notamacropus_eugenii
ENSGMOG00000015834	lsg1	91	79.121	ENSONIG00000002635	lsg1	87	80.478	Oreochromis_niloticus
ENSGMOG00000015834	lsg1	94	63.371	ENSOANG00000012742	LSG1	99	63.371	Ornithorhynchus_anatinus
ENSGMOG00000015834	lsg1	92	69.180	ENSOCUG00000004817	LSG1	83	71.605	Oryctolagus_cuniculus
ENSGMOG00000015834	lsg1	98	68.058	ENSORLG00000007695	lsg1	98	67.994	Oryzias_latipes
ENSGMOG00000015834	lsg1	98	68.539	ENSORLG00020016286	lsg1	98	68.218	Oryzias_latipes_hni
ENSGMOG00000015834	lsg1	88	80.408	ENSORLG00015012025	lsg1	98	67.353	Oryzias_latipes_hsok
ENSGMOG00000015834	lsg1	87	79.835	ENSOMEG00000022379	lsg1	90	79.835	Oryzias_melastigma
ENSGMOG00000015834	lsg1	91	70.100	ENSOGAG00000003475	LSG1	84	70.100	Otolemur_garnettii
ENSGMOG00000015834	lsg1	88	71.032	ENSOARG00000020403	LSG1	98	60.031	Ovis_aries
ENSGMOG00000015834	lsg1	87	71.084	ENSPPAG00000029271	LSG1	81	72.766	Pan_paniscus
ENSGMOG00000015834	lsg1	91	68.182	ENSPPRG00000010281	LSG1	82	72.269	Panthera_pardus
ENSGMOG00000015834	lsg1	91	69.536	ENSPTIG00000010789	LSG1	83	72.269	Panthera_tigris_altaica
ENSGMOG00000015834	lsg1	87	71.084	ENSPTRG00000015760	LSG1	81	72.766	Pan_troglodytes
ENSGMOG00000015834	lsg1	87	70.238	ENSPANG00000018249	LSG1	82	69.281	Papio_anubis
ENSGMOG00000015834	lsg1	87	77.689	ENSPKIG00000002895	lsg1	85	77.826	Paramormyrops_kingsleyae
ENSGMOG00000015834	lsg1	96	57.781	ENSPSIG00000009821	LSG1	99	58.713	Pelodiscus_sinensis
ENSGMOG00000015834	lsg1	94	70.695	ENSPMGG00000000931	lsg1	90	80.519	Periophthalmus_magnuspinnatus
ENSGMOG00000015834	lsg1	99	60.153	ENSPEMG00000012082	-	82	71.915	Peromyscus_maniculatus_bairdii
ENSGMOG00000015834	lsg1	99	56.652	ENSPMAG00000007451	lsg1	84	67.500	Petromyzon_marinus
ENSGMOG00000015834	lsg1	88	75.207	ENSPCIG00000013890	LSG1	79	65.241	Phascolarctos_cinereus
ENSGMOG00000015834	lsg1	97	69.391	ENSPFOG00000021882	lsg1	98	69.219	Poecilia_formosa
ENSGMOG00000015834	lsg1	97	69.120	ENSPLAG00000019536	lsg1	98	69.108	Poecilia_latipinna
ENSGMOG00000015834	lsg1	97	68.371	ENSPMEG00000017281	lsg1	98	68.203	Poecilia_mexicana
ENSGMOG00000015834	lsg1	97	59.084	ENSPREG00000006048	lsg1	98	58.464	Poecilia_reticulata
ENSGMOG00000015834	lsg1	92	59.672	ENSPPYG00000014425	LSG1	98	60.067	Pongo_abelii
ENSGMOG00000015834	lsg1	77	67.949	ENSPCAG00000005511	LSG1	68	71.560	Procavia_capensis
ENSGMOG00000015834	lsg1	88	69.205	ENSPCOG00000012360	LSG1	82	69.547	Propithecus_coquereli
ENSGMOG00000015834	lsg1	91	76.868	ENSPNYG00000021994	lsg1	98	68.955	Pundamilia_nyererei
ENSGMOG00000015834	lsg1	100	69.646	ENSPNAG00000015533	lsg1	98	67.717	Pygocentrus_nattereri
ENSGMOG00000015834	lsg1	88	70.238	ENSRNOG00000001727	Lsg1	84	70.370	Rattus_norvegicus
ENSGMOG00000015834	lsg1	88	69.180	ENSRBIG00000029053	LSG1	82	70.417	Rhinopithecus_bieti
ENSGMOG00000015834	lsg1	88	69.180	ENSRROG00000037702	LSG1	82	70.417	Rhinopithecus_roxellana
ENSGMOG00000015834	lsg1	63	52.632	YGL099W	LSG1	69	46.491	Saccharomyces_cerevisiae
ENSGMOG00000015834	lsg1	88	70.079	ENSSBOG00000034938	LSG1	82	71.667	Saimiri_boliviensis_boliviensis
ENSGMOG00000015834	lsg1	69	68.421	ENSSHAG00000003487	LSG1	81	70.833	Sarcophilus_harrisii
ENSGMOG00000015834	lsg1	98	67.143	ENSSFOG00015008955	lsg1	98	67.091	Scleropages_formosus
ENSGMOG00000015834	lsg1	98	69.592	ENSSDUG00000004622	lsg1	87	82.072	Seriola_dumerili
ENSGMOG00000015834	lsg1	98	70.240	ENSSLDG00000010869	lsg1	98	69.823	Seriola_lalandi_dorsalis
ENSGMOG00000015834	lsg1	79	67.987	ENSSARG00000012981	LSG1	73	67.987	Sorex_araneus
ENSGMOG00000015834	lsg1	100	61.912	ENSSPUG00000016347	LSG1	98	61.705	Sphenodon_punctatus
ENSGMOG00000015834	lsg1	90	79.121	ENSSPAG00000005508	lsg1	99	70.128	Stegastes_partitus
ENSGMOG00000015834	lsg1	87	71.084	ENSSSCG00000011827	LSG1	83	73.191	Sus_scrofa
ENSGMOG00000015834	lsg1	79	67.857	ENSTGUG00000009068	LSG1	83	67.857	Taeniopygia_guttata
ENSGMOG00000015834	lsg1	87	80.833	ENSTRUG00000017380	lsg1	87	80.658	Takifugu_rubripes
ENSGMOG00000015834	lsg1	97	70.531	ENSTNIG00000015570	lsg1	98	70.513	Tetraodon_nigroviridis
ENSGMOG00000015834	lsg1	78	75.806	ENSTTRG00000000559	LSG1	74	75.806	Tursiops_truncatus
ENSGMOG00000015834	lsg1	88	71.032	ENSUAMG00000012454	LSG1	82	72.269	Ursus_americanus
ENSGMOG00000015834	lsg1	88	71.032	ENSUMAG00000000855	LSG1	82	72.269	Ursus_maritimus
ENSGMOG00000015834	lsg1	81	69.307	ENSVPAG00000012400	LSG1	83	69.307	Vicugna_pacos
ENSGMOG00000015834	lsg1	81	77.674	ENSVVUG00000008956	LSG1	80	77.674	Vulpes_vulpes
ENSGMOG00000015834	lsg1	89	71.269	ENSXETG00000003451	lsg1	87	72.047	Xenopus_tropicalis
ENSGMOG00000015834	lsg1	97	68.203	ENSXCOG00000003239	lsg1	98	68.146	Xiphophorus_couchianus
ENSGMOG00000015834	lsg1	85	82.684	ENSXMAG00000005536	lsg1	87	82.479	Xiphophorus_maculatus