EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSGMOG00000016224 (Gene tree)
Gene ID: -
Gene Symbol: rbm5
Alias: wu:fc25a08|wu:fe06f12
Full Name: RNA binding motif protein 5
Gene Type: protein_coding
Species: Gadus_morhua
Status: putative
Strand: Plus strand
Length: 8563 bases
Position: chrGeneScaffold_176:81722-90284
Accession: ZDB-GENE-030131-3022
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSGMOP00000017447	zf-RanBP	PF00641.18	2.2e-10	1	1
ENSGMOP00000017447	RRM_1	PF00076.22	4.8e-15	1	2
ENSGMOP00000017447	RRM_1	PF00076.22	4.8e-15	2	2
ENSGMOP00000017447	G-patch	PF01585.23	4.9e-19	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSGMOT00000017878	-	2361	-	ENSGMOP00000017447	786 (aa)	-	UPI00023F381D

Gene Model

Click here to download ENSGMOG00000016224's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSGMOG00000016224's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSGMOG00000016224	rbm5	99	52.340	ENSGMOG00000007810	-	99	52.709
ENSGMOG00000016224	rbm5	50	47.527	ENSGMOG00000011093	rbm10	100	47.527

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSGMOG00000016224	rbm5	92	63.165	ENSG00000003756	RBM5	99	62.999	Homo_sapiens
ENSGMOG00000016224	rbm5	100	73.832	ENSAPOG00000016625	rbm5	99	73.131	Acanthochromis_polyacanthus
ENSGMOG00000016224	rbm5	99	63.507	ENSAPOG00000006011	-	99	63.507	Acanthochromis_polyacanthus
ENSGMOG00000016224	rbm5	92	62.776	ENSAMEG00000012005	RBM5	99	62.636	Ailuropoda_melanoleuca
ENSGMOG00000016224	rbm5	100	62.252	ENSACIG00000021310	-	99	61.881	Amphilophus_citrinellus
ENSGMOG00000016224	rbm5	75	72.269	ENSACIG00000007571	rbm5	100	71.261	Amphilophus_citrinellus
ENSGMOG00000016224	rbm5	99	63.268	ENSAOCG00000017312	-	99	63.391	Amphiprion_ocellaris
ENSGMOG00000016224	rbm5	100	73.543	ENSAOCG00000002880	rbm5	99	72.960	Amphiprion_ocellaris
ENSGMOG00000016224	rbm5	89	71.355	ENSAPEG00000011862	rbm5	92	65.380	Amphiprion_percula
ENSGMOG00000016224	rbm5	99	63.152	ENSAPEG00000018222	RBM5	99	63.391	Amphiprion_percula
ENSGMOG00000016224	rbm5	100	74.471	ENSATEG00000024663	rbm5	99	73.724	Anabas_testudineus
ENSGMOG00000016224	rbm5	99	63.349	ENSATEG00000003838	-	99	63.115	Anabas_testudineus
ENSGMOG00000016224	rbm5	93	64.073	ENSAPLG00000011176	RBM5	99	63.077	Anas_platyrhynchos
ENSGMOG00000016224	rbm5	100	60.407	ENSACAG00000008580	RBM5	99	60.094	Anolis_carolinensis
ENSGMOG00000016224	rbm5	92	64.378	ENSANAG00000025199	RBM5	99	62.999	Aotus_nancymaae
ENSGMOG00000016224	rbm5	100	72.430	ENSACLG00000012748	rbm5	99	72.196	Astatotilapia_calliptera
ENSGMOG00000016224	rbm5	88	80.488	ENSACLG00000024198	RBM5	97	78.571	Astatotilapia_calliptera
ENSGMOG00000016224	rbm5	83	71.108	ENSAMXG00000008146	rbm5	100	69.425	Astyanax_mexicanus
ENSGMOG00000016224	rbm5	92	62.516	ENSBTAG00000006330	RBM5	99	62.394	Bos_taurus
ENSGMOG00000016224	rbm5	92	63.165	ENSCJAG00000004740	RBM5	99	62.999	Callithrix_jacchus
ENSGMOG00000016224	rbm5	92	62.905	ENSCAFG00000010866	RBM5	99	62.757	Canis_familiaris
ENSGMOG00000016224	rbm5	92	62.905	ENSCAFG00020022126	RBM5	99	62.757	Canis_lupus_dingo
ENSGMOG00000016224	rbm5	92	62.646	ENSCHIG00000018435	RBM5	99	62.515	Capra_hircus
ENSGMOG00000016224	rbm5	77	61.787	ENSTSYG00000004158	RBM5	97	61.393	Carlito_syrichta
ENSGMOG00000016224	rbm5	92	55.047	ENSCAPG00000013495	RBM5	99	53.109	Cavia_aperea
ENSGMOG00000016224	rbm5	92	63.220	ENSCPOG00000008151	RBM5	99	62.424	Cavia_porcellus
ENSGMOG00000016224	rbm5	92	63.342	ENSCCAG00000026401	RBM5	99	62.999	Cebus_capucinus
ENSGMOG00000016224	rbm5	92	63.165	ENSCATG00000041038	RBM5	99	62.999	Cercocebus_atys
ENSGMOG00000016224	rbm5	92	63.672	ENSCLAG00000007873	RBM5	99	62.500	Chinchilla_lanigera
ENSGMOG00000016224	rbm5	92	63.165	ENSCSAG00000014401	RBM5	99	62.999	Chlorocebus_sabaeus
ENSGMOG00000016224	rbm5	80	57.549	ENSCHOG00000009429	RBM5	85	57.698	Choloepus_hoffmanni
ENSGMOG00000016224	rbm5	91	64.286	ENSCPBG00000002406	RBM5	99	61.775	Chrysemys_picta_bellii
ENSGMOG00000016224	rbm5	92	64.073	ENSCANG00000031250	RBM5	99	62.349	Colobus_angolensis_palliatus
ENSGMOG00000016224	rbm5	92	63.922	ENSCGRG00001010543	Rbm5	99	62.107	Cricetulus_griseus_chok1gshd
ENSGMOG00000016224	rbm5	92	63.922	ENSCGRG00000008475	Rbm5	99	62.107	Cricetulus_griseus_crigri
ENSGMOG00000016224	rbm5	98	75.231	ENSCSEG00000000596	rbm5	96	69.637	Cynoglossus_semilaevis
ENSGMOG00000016224	rbm5	100	72.195	ENSCVAG00000005655	rbm5	99	73.540	Cyprinodon_variegatus
ENSGMOG00000016224	rbm5	100	60.710	ENSDARG00000098280	rbm5	98	67.105	Danio_rerio
ENSGMOG00000016224	rbm5	92	64.183	ENSDNOG00000011756	RBM5	99	62.591	Dasypus_novemcinctus
ENSGMOG00000016224	rbm5	92	64.052	ENSDORG00000007692	Rbm5	99	62.228	Dipodomys_ordii
ENSGMOG00000016224	rbm5	91	61.295	ENSETEG00000012773	RBM5	93	60.966	Echinops_telfairi
ENSGMOG00000016224	rbm5	90	49.512	ENSEBUG00000017034	rbm5	96	47.494	Eptatretus_burgeri
ENSGMOG00000016224	rbm5	92	62.905	ENSEASG00005011835	RBM5	99	62.757	Equus_asinus_asinus
ENSGMOG00000016224	rbm5	92	62.905	ENSECAG00000020447	RBM5	99	62.757	Equus_caballus
ENSGMOG00000016224	rbm5	80	72.683	ENSEEUG00000005943	RBM5	91	70.244	Erinaceus_europaeus
ENSGMOG00000016224	rbm5	100	70.960	ENSELUG00000022467	rbm5	99	70.492	Esox_lucius
ENSGMOG00000016224	rbm5	92	63.446	ENSFCAG00000014639	RBM5	99	62.636	Felis_catus
ENSGMOG00000016224	rbm5	99	61.372	ENSFALG00000008828	RBM5	91	60.973	Ficedula_albicollis
ENSGMOG00000016224	rbm5	92	63.720	ENSFDAG00000001897	RBM5	99	62.637	Fukomys_damarensis
ENSGMOG00000016224	rbm5	100	73.231	ENSFHEG00000015954	rbm5	99	72.855	Fundulus_heteroclitus
ENSGMOG00000016224	rbm5	92	63.827	ENSGALG00000039288	RBM5	91	60.142	Gallus_gallus
ENSGMOG00000016224	rbm5	100	72.547	ENSGAFG00000010690	rbm5	99	72.466	Gambusia_affinis
ENSGMOG00000016224	rbm5	100	76.034	ENSGACG00000010469	rbm5	99	75.547	Gasterosteus_aculeatus
ENSGMOG00000016224	rbm5	100	63.012	ENSGACG00000000858	-	99	62.651	Gasterosteus_aculeatus
ENSGMOG00000016224	rbm5	86	63.649	ENSGAGG00000007935	RBM5	99	60.945	Gopherus_agassizii
ENSGMOG00000016224	rbm5	92	63.165	ENSGGOG00000014490	RBM5	99	62.999	Gorilla_gorilla
ENSGMOG00000016224	rbm5	100	72.061	ENSHBUG00000001941	rbm5	99	71.828	Haplochromis_burtoni
ENSGMOG00000016224	rbm5	88	80.488	ENSHBUG00000011901	-	97	78.571	Haplochromis_burtoni
ENSGMOG00000016224	rbm5	92	62.727	ENSHGLG00000014844	RBM5	99	62.591	Heterocephalus_glaber_female
ENSGMOG00000016224	rbm5	92	62.679	ENSHGLG00100010739	RBM5	99	62.545	Heterocephalus_glaber_male
ENSGMOG00000016224	rbm5	95	68.356	ENSHCOG00000017110	rbm5	98	68.272	Hippocampus_comes
ENSGMOG00000016224	rbm5	99	54.484	ENSHCOG00000004536	-	99	52.935	Hippocampus_comes
ENSGMOG00000016224	rbm5	100	70.059	ENSIPUG00000000640	rbm5	99	69.822	Ictalurus_punctatus
ENSGMOG00000016224	rbm5	92	63.766	ENSSTOG00000013856	RBM5	99	62.455	Ictidomys_tridecemlineatus
ENSGMOG00000016224	rbm5	92	64.908	ENSJJAG00000008844	Rbm5	99	63.248	Jaculus_jaculus
ENSGMOG00000016224	rbm5	100	73.709	ENSKMAG00000006663	rbm5	99	72.887	Kryptolebias_marmoratus
ENSGMOG00000016224	rbm5	99	60.993	ENSLBEG00000010877	-	93	60.993	Labrus_bergylta
ENSGMOG00000016224	rbm5	71	56.863	ENSLBEG00000002522	-	94	55.245	Labrus_bergylta
ENSGMOG00000016224	rbm5	100	74.178	ENSLBEG00000020858	rbm5	99	73.474	Labrus_bergylta
ENSGMOG00000016224	rbm5	100	65.057	ENSLOCG00000010774	rbm5	99	64.368	Lepisosteus_oculatus
ENSGMOG00000016224	rbm5	92	62.824	ENSLAFG00000006733	RBM5	99	62.681	Loxodonta_africana
ENSGMOG00000016224	rbm5	92	63.165	ENSMFAG00000031609	RBM5	99	62.999	Macaca_fascicularis
ENSGMOG00000016224	rbm5	92	63.165	ENSMMUG00000004921	RBM5	99	62.999	Macaca_mulatta
ENSGMOG00000016224	rbm5	92	63.294	ENSMNEG00000044394	RBM5	99	63.120	Macaca_nemestrina
ENSGMOG00000016224	rbm5	92	64.199	ENSMLEG00000034689	RBM5	99	63.535	Mandrillus_leucophaeus
ENSGMOG00000016224	rbm5	100	64.153	ENSMAMG00000023948	-	99	63.535	Mastacembelus_armatus
ENSGMOG00000016224	rbm5	91	85.714	ENSMAMG00000017277	rbm5	97	85.714	Mastacembelus_armatus
ENSGMOG00000016224	rbm5	100	59.597	ENSMZEG00005010035	-	99	59.005	Maylandia_zebra
ENSGMOG00000016224	rbm5	100	72.430	ENSMZEG00005015328	rbm5	99	72.196	Maylandia_zebra
ENSGMOG00000016224	rbm5	92	64.089	ENSMGAG00000003972	RBM5	100	63.472	Meleagris_gallopavo
ENSGMOG00000016224	rbm5	92	62.924	ENSMAUG00000020572	Rbm5	98	62.152	Mesocricetus_auratus
ENSGMOG00000016224	rbm5	92	63.446	ENSMICG00000016179	RBM5	99	62.636	Microcebus_murinus
ENSGMOG00000016224	rbm5	92	63.922	ENSMOCG00000017479	Rbm5	99	62.228	Microtus_ochrogaster
ENSGMOG00000016224	rbm5	100	55.709	ENSMMOG00000021804	-	99	55.666	Mola_mola
ENSGMOG00000016224	rbm5	97	78.182	ENSMMOG00000015342	rbm5	92	78.788	Mola_mola
ENSGMOG00000016224	rbm5	92	62.953	ENSMODG00000012301	RBM5	99	61.585	Monodelphis_domestica
ENSGMOG00000016224	rbm5	100	72.229	ENSMALG00000000609	rbm5	99	71.871	Monopterus_albus
ENSGMOG00000016224	rbm5	100	61.584	ENSMALG00000016769	-	99	61.420	Monopterus_albus
ENSGMOG00000016224	rbm5	92	62.222	MGP_CAROLIEiJ_G0032660	Rbm5	99	61.911	Mus_caroli
ENSGMOG00000016224	rbm5	92	62.353	ENSMUSG00000032580	Rbm5	99	62.031	Mus_musculus
ENSGMOG00000016224	rbm5	92	62.353	MGP_PahariEiJ_G0015528	Rbm5	99	62.031	Mus_pahari
ENSGMOG00000016224	rbm5	92	62.353	MGP_SPRETEiJ_G0033805	Rbm5	99	62.031	Mus_spretus
ENSGMOG00000016224	rbm5	100	62.575	ENSMLUG00000007875	RBM5	99	62.954	Myotis_lucifugus
ENSGMOG00000016224	rbm5	92	64.314	ENSNGAG00000011777	Rbm5	99	62.470	Nannospalax_galili
ENSGMOG00000016224	rbm5	99	61.462	ENSNBRG00000004400	RBM5	100	60.719	Neolamprologus_brichardi
ENSGMOG00000016224	rbm5	100	72.293	ENSNBRG00000018097	rbm5	99	72.061	Neolamprologus_brichardi
ENSGMOG00000016224	rbm5	92	63.247	ENSNLEG00000006943	RBM5	99	62.878	Nomascus_leucogenys
ENSGMOG00000016224	rbm5	92	58.549	ENSMEUG00000012994	RBM5	100	57.503	Notamacropus_eugenii
ENSGMOG00000016224	rbm5	91	61.111	ENSOPRG00000015154	RBM5	93	61.155	Ochotona_princeps
ENSGMOG00000016224	rbm5	92	62.679	ENSODEG00000016254	-	99	62.545	Octodon_degus
ENSGMOG00000016224	rbm5	100	60.727	ENSODEG00000019111	-	99	60.558	Octodon_degus
ENSGMOG00000016224	rbm5	100	61.091	ENSONIG00000019007	RBM5	99	60.973	Oreochromis_niloticus
ENSGMOG00000016224	rbm5	100	72.293	ENSONIG00000004107	rbm5	99	71.944	Oreochromis_niloticus
ENSGMOG00000016224	rbm5	87	63.172	ENSOANG00000006557	RBM5	100	62.759	Ornithorhynchus_anatinus
ENSGMOG00000016224	rbm5	92	62.257	ENSOCUG00000011652	RBM5	99	61.669	Oryctolagus_cuniculus
ENSGMOG00000016224	rbm5	95	72.188	ENSORLG00000003369	rbm5	98	71.817	Oryzias_latipes
ENSGMOG00000016224	rbm5	100	56.690	ENSORLG00000001053	-	99	56.690	Oryzias_latipes
ENSGMOG00000016224	rbm5	100	72.556	ENSORLG00020021744	rbm5	99	72.203	Oryzias_latipes_hni
ENSGMOG00000016224	rbm5	95	55.405	ENSORLG00020006782	-	98	55.405	Oryzias_latipes_hni
ENSGMOG00000016224	rbm5	95	55.528	ENSORLG00015002854	-	98	55.528	Oryzias_latipes_hsok
ENSGMOG00000016224	rbm5	91	85.714	ENSORLG00015018379	rbm5	97	85.714	Oryzias_latipes_hsok
ENSGMOG00000016224	rbm5	100	71.662	ENSOMEG00000002219	rbm5	99	72.418	Oryzias_melastigma
ENSGMOG00000016224	rbm5	80	55.556	ENSOMEG00000010653	-	97	53.724	Oryzias_melastigma
ENSGMOG00000016224	rbm5	92	63.576	ENSOGAG00000004205	RBM5	100	63.046	Otolemur_garnettii
ENSGMOG00000016224	rbm5	92	62.646	ENSOARG00000010923	RBM5	99	62.515	Ovis_aries
ENSGMOG00000016224	rbm5	92	63.342	ENSPPAG00000043010	RBM5	99	62.999	Pan_paniscus
ENSGMOG00000016224	rbm5	92	63.446	ENSPPRG00000005404	RBM5	99	62.636	Panthera_pardus
ENSGMOG00000016224	rbm5	92	63.446	ENSPTIG00000000962	RBM5	99	62.636	Panthera_tigris_altaica
ENSGMOG00000016224	rbm5	92	63.342	ENSPTRG00000014946	RBM5	99	62.999	Pan_troglodytes
ENSGMOG00000016224	rbm5	92	63.165	ENSPANG00000018507	RBM5	99	62.999	Papio_anubis
ENSGMOG00000016224	rbm5	100	67.169	ENSPKIG00000024837	RBM5	99	66.473	Paramormyrops_kingsleyae
ENSGMOG00000016224	rbm5	75	59.904	ENSPKIG00000019187	-	100	58.805	Paramormyrops_kingsleyae
ENSGMOG00000016224	rbm5	87	64.681	ENSPSIG00000016073	RBM5	100	63.562	Pelodiscus_sinensis
ENSGMOG00000016224	rbm5	88	82.051	ENSPMGG00000004719	-	97	78.571	Periophthalmus_magnuspinnatus
ENSGMOG00000016224	rbm5	78	65.016	ENSPMGG00000017347	rbm5	100	63.419	Periophthalmus_magnuspinnatus
ENSGMOG00000016224	rbm5	99	43.089	ENSPMAG00000001998	rbm5	99	43.952	Petromyzon_marinus
ENSGMOG00000016224	rbm5	92	62.677	ENSPCIG00000021531	RBM5	99	61.585	Phascolarctos_cinereus
ENSGMOG00000016224	rbm5	100	72.112	ENSPLAG00000006318	rbm5	99	71.860	Poecilia_latipinna
ENSGMOG00000016224	rbm5	71	71.870	ENSPMEG00000008651	rbm5	98	70.648	Poecilia_mexicana
ENSGMOG00000016224	rbm5	100	71.963	ENSPMEG00000004295	rbm5	99	72.177	Poecilia_mexicana
ENSGMOG00000016224	rbm5	100	72.229	ENSPREG00000003795	rbm5	99	72.558	Poecilia_reticulata
ENSGMOG00000016224	rbm5	58	62.844	ENSPCAG00000005459	RBM5	70	67.327	Procavia_capensis
ENSGMOG00000016224	rbm5	92	63.446	ENSPCOG00000025840	RBM5	99	62.515	Propithecus_coquereli
ENSGMOG00000016224	rbm5	92	60.887	ENSPVAG00000006812	RBM5	99	60.507	Pteropus_vampyrus
ENSGMOG00000016224	rbm5	82	61.222	ENSPNYG00000006361	RBM5	99	60.369	Pundamilia_nyererei
ENSGMOG00000016224	rbm5	100	72.177	ENSPNYG00000014787	rbm5	99	71.944	Pundamilia_nyererei
ENSGMOG00000016224	rbm5	100	69.168	ENSPNAG00000012070	rbm5	99	68.897	Pygocentrus_nattereri
ENSGMOG00000016224	rbm5	92	63.660	ENSRNOG00000018153	Rbm5	99	62.349	Rattus_norvegicus
ENSGMOG00000016224	rbm5	92	64.073	ENSRBIG00000012679	RBM5	99	63.120	Rhinopithecus_bieti
ENSGMOG00000016224	rbm5	92	64.073	ENSRROG00000041331	RBM5	99	63.120	Rhinopithecus_roxellana
ENSGMOG00000016224	rbm5	92	63.165	ENSSBOG00000006324	RBM5	99	62.999	Saimiri_boliviensis_boliviensis
ENSGMOG00000016224	rbm5	92	62.839	ENSSHAG00000018260	RBM5	99	61.733	Sarcophilus_harrisii
ENSGMOG00000016224	rbm5	100	68.230	ENSSFOG00015019052	rbm5	94	67.761	Scleropages_formosus
ENSGMOG00000016224	rbm5	100	66.045	ENSSFOG00015019645	-	99	68.035	Scleropages_formosus
ENSGMOG00000016224	rbm5	100	75.147	ENSSMAG00000017106	rbm5	99	75.147	Scophthalmus_maximus
ENSGMOG00000016224	rbm5	100	74.503	ENSSDUG00000019775	rbm5	99	73.801	Seriola_dumerili
ENSGMOG00000016224	rbm5	99	64.169	ENSSLDG00000015996	-	99	64.061	Seriola_lalandi_dorsalis
ENSGMOG00000016224	rbm5	100	74.386	ENSSLDG00000002329	rbm5	99	73.684	Seriola_lalandi_dorsalis
ENSGMOG00000016224	rbm5	99	62.073	ENSSPUG00000001876	RBM5	91	60.507	Sphenodon_punctatus
ENSGMOG00000016224	rbm5	99	63.625	ENSSPAG00000020011	-	99	63.782	Stegastes_partitus
ENSGMOG00000016224	rbm5	100	72.982	ENSSPAG00000019638	rbm5	99	72.632	Stegastes_partitus
ENSGMOG00000016224	rbm5	83	76.190	ENSSSCG00000011395	RBM5	97	76.190	Sus_scrofa
ENSGMOG00000016224	rbm5	92	57.607	ENSTGUG00000006417	RBM5	99	58.344	Taeniopygia_guttata
ENSGMOG00000016224	rbm5	100	72.288	ENSTRUG00000008292	rbm5	99	71.698	Takifugu_rubripes
ENSGMOG00000016224	rbm5	86	59.948	ENSTNIG00000014742	rbm5	98	55.455	Tetraodon_nigroviridis
ENSGMOG00000016224	rbm5	92	58.127	ENSTBEG00000005424	RBM5	99	57.333	Tupaia_belangeri
ENSGMOG00000016224	rbm5	91	58.893	ENSTTRG00000007717	RBM5	99	58.182	Tursiops_truncatus
ENSGMOG00000016224	rbm5	92	62.776	ENSUAMG00000028347	RBM5	99	62.636	Ursus_americanus
ENSGMOG00000016224	rbm5	92	62.776	ENSUMAG00000022027	RBM5	99	62.636	Ursus_maritimus
ENSGMOG00000016224	rbm5	80	61.004	ENSVPAG00000009388	RBM5	97	61.411	Vicugna_pacos
ENSGMOG00000016224	rbm5	92	62.905	ENSVVUG00000028647	RBM5	99	62.757	Vulpes_vulpes
ENSGMOG00000016224	rbm5	100	72.462	ENSXMAG00000016369	rbm5	99	72.791	Xiphophorus_maculatus