EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSGMOG00000016431 (Gene tree)
Gene ID: -
Gene Symbol: blm
Alias: -
Full Name: BLM RecQ like helicase
Gene Type: protein_coding
Species: Gadus_morhua
Status: putative
Strand: Minus strand
Length: 8630 bases
Position: chrGeneScaffold_2012:62265-70894
Accession: ZDB-GENE-070702-5
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSGMOP00000017921	HRDC	PF00570.23	9.8e-14	1	1
ENSGMOP00000017900	HRDC	PF00570.23	1.7e-13	1	1
ENSGMOP00000017886	HRDC	PF00570.23	1.7e-13	1	1
ENSGMOP00000017860	HRDC	PF00570.23	1.8e-13	1	1
ENSGMOP00000017900	BDHCT	PF08072.11	8.2e-17	1	1
ENSGMOP00000017886	BDHCT	PF08072.11	8.3e-17	1	1
ENSGMOP00000017860	BDHCT	PF08072.11	7.5e-15	1	1
ENSGMOP00000017921	DEAD	PF00270.29	5.5e-17	1	1
ENSGMOP00000017900	DEAD	PF00270.29	1.2e-16	1	1
ENSGMOP00000017860	DEAD	PF00270.29	1.2e-16	1	1
ENSGMOP00000017886	DEAD	PF00270.29	1.2e-16	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSGMOT00000018299	-	4170	-	ENSGMOP00000017860	1389 (aa)	-	UPI00023F3C16
ENSGMOT00000018339	-	4050	-	ENSGMOP00000017900	1349 (aa)	-	UPI00023F3C6C
ENSGMOT00000018325	-	4089	-	ENSGMOP00000017886	1362 (aa)	-	UPI00023F3C6B
ENSGMOT00000018360	-	2529	-	ENSGMOP00000017921	842 (aa)	-	UPI00023F3C6D

Gene Model

Click here to download ENSGMOG00000016431's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSGMOG00000016431's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSGMOG00000016431	blm	60	35.581	ENSGMOG00000010504	recql	99	36.989

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSGMOG00000016431	blm	90	61.607	ENSG00000197299	BLM	83	71.959	Homo_sapiens
ENSGMOG00000016431	blm	98	69.390	ENSAPOG00000017966	blm	99	59.773	Acanthochromis_polyacanthus
ENSGMOG00000016431	blm	90	60.660	ENSAMEG00000013843	BLM	84	62.135	Ailuropoda_melanoleuca
ENSGMOG00000016431	blm	98	71.047	ENSACIG00000023762	blm	99	60.071	Amphilophus_citrinellus
ENSGMOG00000016431	blm	98	69.195	ENSAOCG00000003318	blm	99	59.228	Amphiprion_ocellaris
ENSGMOG00000016431	blm	98	69.195	ENSAPEG00000018105	blm	99	59.316	Amphiprion_percula
ENSGMOG00000016431	blm	98	69.965	ENSATEG00000006421	blm	99	59.916	Anabas_testudineus
ENSGMOG00000016431	blm	99	57.610	ENSAPLG00000006878	BLM	85	62.776	Anas_platyrhynchos
ENSGMOG00000016431	blm	90	62.341	ENSACAG00000014275	BLM	85	63.995	Anolis_carolinensis
ENSGMOG00000016431	blm	89	61.069	ENSANAG00000038415	BLM	50	71.753	Aotus_nancymaae
ENSGMOG00000016431	blm	98	70.513	ENSACLG00000020354	blm	99	60.424	Astatotilapia_calliptera
ENSGMOG00000016431	blm	99	65.792	ENSAMXG00000016970	blm	99	53.746	Astyanax_mexicanus
ENSGMOG00000016431	blm	86	67.749	ENSBTAG00000020301	BLM	82	77.333	Bos_taurus
ENSGMOG00000016431	blm	76	38.990	WBGene00001865	him-6	79	37.591	Caenorhabditis_elegans
ENSGMOG00000016431	blm	89	61.323	ENSCJAG00000009803	BLM	82	71.959	Callithrix_jacchus
ENSGMOG00000016431	blm	90	60.459	ENSCAFG00000012385	BLM	84	62.038	Canis_familiaris
ENSGMOG00000016431	blm	90	60.459	ENSCAFG00020016111	BLM	82	71.340	Canis_lupus_dingo
ENSGMOG00000016431	blm	96	59.193	ENSCHIG00000010329	BLM	82	77.480	Capra_hircus
ENSGMOG00000016431	blm	90	61.364	ENSTSYG00000012368	BLM	100	45.530	Carlito_syrichta
ENSGMOG00000016431	blm	82	67.572	ENSCAPG00000017976	BLM	68	69.746	Cavia_aperea
ENSGMOG00000016431	blm	90	61.069	ENSCPOG00000001761	BLM	100	44.616	Cavia_porcellus
ENSGMOG00000016431	blm	89	61.196	ENSCCAG00000023069	BLM	99	45.017	Cebus_capucinus
ENSGMOG00000016431	blm	90	60.969	ENSCATG00000040609	BLM	82	71.340	Cercocebus_atys
ENSGMOG00000016431	blm	90	61.237	ENSCLAG00000012111	BLM	100	44.842	Chinchilla_lanigera
ENSGMOG00000016431	blm	90	61.224	ENSCSAG00000017040	BLM	87	60.048	Chlorocebus_sabaeus
ENSGMOG00000016431	blm	81	58.333	ENSCHOG00000006255	BLM	77	58.333	Choloepus_hoffmanni
ENSGMOG00000016431	blm	99	59.629	ENSCPBG00000025000	BLM	82	64.268	Chrysemys_picta_bellii
ENSGMOG00000016431	blm	50	40.498	ENSCING00000021036	-	78	41.761	Ciona_intestinalis
ENSGMOG00000016431	blm	61	37.430	ENSCSAVG00000007521	-	90	37.655	Ciona_savignyi
ENSGMOG00000016431	blm	64	64.844	ENSCANG00000034808	BLM	99	56.667	Colobus_angolensis_palliatus
ENSGMOG00000016431	blm	90	60.819	ENSCGRG00001024897	Blm	58	59.976	Cricetulus_griseus_chok1gshd
ENSGMOG00000016431	blm	98	67.583	ENSCSEG00000013483	blm	97	58.860	Cynoglossus_semilaevis
ENSGMOG00000016431	blm	62	72.054	ENSCVAG00000017583	blm	83	72.414	Cyprinodon_variegatus
ENSGMOG00000016431	blm	99	64.686	ENSDARG00000077089	blm	99	54.502	Danio_rerio
ENSGMOG00000016431	blm	89	61.125	ENSDNOG00000010159	BLM	83	62.660	Dasypus_novemcinctus
ENSGMOG00000016431	blm	91	60.951	ENSDORG00000011033	Blm	100	52.328	Dipodomys_ordii
ENSGMOG00000016431	blm	79	43.056	FBgn0002906	Blm	52	42.548	Drosophila_melanogaster
ENSGMOG00000016431	blm	78	49.798	ENSETEG00000015019	BLM	58	49.798	Echinops_telfairi
ENSGMOG00000016431	blm	69	52.932	ENSEBUG00000015743	-	99	49.849	Eptatretus_burgeri
ENSGMOG00000016431	blm	89	57.564	ENSEASG00005006727	BLM	84	58.779	Equus_asinus_asinus
ENSGMOG00000016431	blm	89	61.232	ENSECAG00000011405	BLM	83	62.628	Equus_caballus
ENSGMOG00000016431	blm	96	56.853	ENSEEUG00000001434	BLM	76	50.466	Erinaceus_europaeus
ENSGMOG00000016431	blm	98	67.349	ENSELUG00000019098	blm	99	55.601	Esox_lucius
ENSGMOG00000016431	blm	90	61.019	ENSFCAG00000006087	BLM	51	71.340	Felis_catus
ENSGMOG00000016431	blm	99	56.200	ENSFALG00000010981	BLM	65	61.009	Ficedula_albicollis
ENSGMOG00000016431	blm	80	76.506	ENSFDAG00000012658	BLM	100	38.089	Fukomys_damarensis
ENSGMOG00000016431	blm	98	69.873	ENSFHEG00000002553	blm	99	58.985	Fundulus_heteroclitus
ENSGMOG00000016431	blm	90	62.148	ENSGALG00000008256	BLM	87	62.103	Gallus_gallus
ENSGMOG00000016431	blm	98	69.697	ENSGAFG00000001117	blm	99	59.120	Gambusia_affinis
ENSGMOG00000016431	blm	99	67.918	ENSGACG00000010863	blm	100	81.818	Gasterosteus_aculeatus
ENSGMOG00000016431	blm	81	62.500	ENSGAGG00000005383	BLM	83	69.268	Gopherus_agassizii
ENSGMOG00000016431	blm	90	61.352	ENSGGOG00000007710	BLM	82	71.959	Gorilla_gorilla
ENSGMOG00000016431	blm	98	70.513	ENSHBUG00000015943	blm	99	60.028	Haplochromis_burtoni
ENSGMOG00000016431	blm	90	60.480	ENSHGLG00000013231	BLM	90	62.038	Heterocephalus_glaber_female
ENSGMOG00000016431	blm	99	66.287	ENSHCOG00000011455	blm	99	61.969	Hippocampus_comes
ENSGMOG00000016431	blm	99	65.242	ENSIPUG00000000529	blm	87	68.009	Ictalurus_punctatus
ENSGMOG00000016431	blm	89	60.710	ENSSTOG00000005000	BLM	84	62.580	Ictidomys_tridecemlineatus
ENSGMOG00000016431	blm	77	73.118	ENSJJAG00000016322	Blm	94	53.678	Jaculus_jaculus
ENSGMOG00000016431	blm	98	70.602	ENSKMAG00000016608	blm	99	58.815	Kryptolebias_marmoratus
ENSGMOG00000016431	blm	83	74.095	ENSLBEG00000018729	blm	96	72.215	Labrus_bergylta
ENSGMOG00000016431	blm	90	62.547	ENSLACG00000006490	BLM	87	64.096	Latimeria_chalumnae
ENSGMOG00000016431	blm	90	66.962	ENSLOCG00000014302	blm	99	52.079	Lepisosteus_oculatus
ENSGMOG00000016431	blm	90	61.224	ENSMFAG00000042982	BLM	82	71.546	Macaca_fascicularis
ENSGMOG00000016431	blm	90	61.097	ENSMMUG00000019526	BLM	82	71.546	Macaca_mulatta
ENSGMOG00000016431	blm	90	60.714	ENSMNEG00000031251	BLM	75	73.770	Macaca_nemestrina
ENSGMOG00000016431	blm	89	57.362	ENSMLEG00000032934	BLM	84	58.643	Mandrillus_leucophaeus
ENSGMOG00000016431	blm	98	70.541	ENSMAMG00000008726	blm	99	60.679	Mastacembelus_armatus
ENSGMOG00000016431	blm	98	70.327	ENSMZEG00005022323	blm	99	60.028	Maylandia_zebra
ENSGMOG00000016431	blm	67	58.333	ENSMGAG00000010473	BLM	99	61.121	Meleagris_gallopavo
ENSGMOG00000016431	blm	91	59.975	ENSMAUG00000008953	Blm	84	61.941	Mesocricetus_auratus
ENSGMOG00000016431	blm	91	60.902	ENSMICG00000034442	BLM	83	70.541	Microcebus_murinus
ENSGMOG00000016431	blm	90	60.382	ENSMOCG00000016367	Blm	84	62.245	Microtus_ochrogaster
ENSGMOG00000016431	blm	98	69.108	ENSMMOG00000006959	blm	99	58.181	Mola_mola
ENSGMOG00000016431	blm	98	56.697	ENSMODG00000019449	BLM	87	58.693	Monodelphis_domestica
ENSGMOG00000016431	blm	98	70.541	ENSMALG00000007323	blm	99	58.971	Monopterus_albus
ENSGMOG00000016431	blm	90	60.000	MGP_CAROLIEiJ_G0029907	Blm	100	44.291	Mus_caroli
ENSGMOG00000016431	blm	90	60.742	ENSMUSG00000030528	Blm	87	61.899	Mus_musculus
ENSGMOG00000016431	blm	90	60.633	MGP_PahariEiJ_G0013129	Blm	84	62.708	Mus_pahari
ENSGMOG00000016431	blm	90	60.870	MGP_SPRETEiJ_G0031009	Blm	87	62.404	Mus_spretus
ENSGMOG00000016431	blm	67	69.369	ENSMPUG00000015657	BLM	79	69.369	Mustela_putorius_furo
ENSGMOG00000016431	blm	90	61.118	ENSMLUG00000014697	BLM	85	62.977	Myotis_lucifugus
ENSGMOG00000016431	blm	91	59.849	ENSNGAG00000001275	Blm	100	44.268	Nannospalax_galili
ENSGMOG00000016431	blm	98	69.240	ENSNBRG00000019702	blm	99	59.123	Neolamprologus_brichardi
ENSGMOG00000016431	blm	90	58.207	ENSNLEG00000012087	BLM	82	68.041	Nomascus_leucogenys
ENSGMOG00000016431	blm	86	57.407	ENSMEUG00000007253	BLM	85	59.127	Notamacropus_eugenii
ENSGMOG00000016431	blm	83	60.000	ENSOPRG00000011667	BLM	67	61.813	Ochotona_princeps
ENSGMOG00000016431	blm	90	56.853	ENSODEG00000015373	BLM	100	49.623	Octodon_degus
ENSGMOG00000016431	blm	98	70.023	ENSONIG00000015193	blm	99	57.084	Oreochromis_niloticus
ENSGMOG00000016431	blm	87	62.824	ENSOANG00000009316	-	99	64.424	Ornithorhynchus_anatinus
ENSGMOG00000016431	blm	89	60.897	ENSOCUG00000013969	BLM	84	62.500	Oryctolagus_cuniculus
ENSGMOG00000016431	blm	99	69.827	ENSORLG00000008110	blm	99	60.537	Oryzias_latipes
ENSGMOG00000016431	blm	99	69.711	ENSORLG00020004812	blm	99	60.510	Oryzias_latipes_hni
ENSGMOG00000016431	blm	99	69.746	ENSORLG00015018640	blm	99	65.306	Oryzias_latipes_hsok
ENSGMOG00000016431	blm	99	68.433	ENSOMEG00000023545	blm	99	59.185	Oryzias_melastigma
ENSGMOG00000016431	blm	90	60.404	ENSOGAG00000005708	BLM	87	59.904	Otolemur_garnettii
ENSGMOG00000016431	blm	96	58.698	ENSOARG00000012875	BLM	88	62.500	Ovis_aries
ENSGMOG00000016431	blm	91	60.652	ENSPPAG00000032173	BLM	86	67.619	Pan_paniscus
ENSGMOG00000016431	blm	90	60.764	ENSPPRG00000002471	BLM	82	71.340	Panthera_pardus
ENSGMOG00000016431	blm	90	60.382	ENSPTIG00000016168	BLM	82	70.468	Panthera_tigris_altaica
ENSGMOG00000016431	blm	90	61.175	ENSPTRG00000007460	BLM	82	71.488	Pan_troglodytes
ENSGMOG00000016431	blm	90	61.097	ENSPANG00000018572	BLM	82	71.546	Papio_anubis
ENSGMOG00000016431	blm	90	70.603	ENSPKIG00000008954	blm	99	53.014	Paramormyrops_kingsleyae
ENSGMOG00000016431	blm	64	67.321	ENSPSIG00000009792	BLM	99	69.464	Pelodiscus_sinensis
ENSGMOG00000016431	blm	84	71.351	ENSPMGG00000006629	blm	100	62.615	Periophthalmus_magnuspinnatus
ENSGMOG00000016431	blm	90	60.969	ENSPEMG00000017348	Blm	84	62.883	Peromyscus_maniculatus_bairdii
ENSGMOG00000016431	blm	74	58.896	ENSPMAG00000000445	blm	92	59.071	Petromyzon_marinus
ENSGMOG00000016431	blm	96	58.641	ENSPCIG00000006609	BLM	99	44.633	Phascolarctos_cinereus
ENSGMOG00000016431	blm	98	70.302	ENSPFOG00000005059	blm	99	59.617	Poecilia_formosa
ENSGMOG00000016431	blm	98	70.047	ENSPLAG00000017344	blm	99	59.388	Poecilia_latipinna
ENSGMOG00000016431	blm	98	70.280	ENSPMEG00000000321	blm	99	59.617	Poecilia_mexicana
ENSGMOG00000016431	blm	98	69.930	ENSPREG00000007715	blm	99	59.351	Poecilia_reticulata
ENSGMOG00000016431	blm	90	60.459	ENSPPYG00000006784	BLM	88	61.783	Pongo_abelii
ENSGMOG00000016431	blm	98	55.140	ENSPCAG00000008960	BLM	65	59.823	Procavia_capensis
ENSGMOG00000016431	blm	89	56.184	ENSPCOG00000000439	BLM	53	56.184	Propithecus_coquereli
ENSGMOG00000016431	blm	82	70.492	ENSPVAG00000011642	BLM	60	74.426	Pteropus_vampyrus
ENSGMOG00000016431	blm	98	59.884	ENSPNYG00000010956	blm	99	52.606	Pundamilia_nyererei
ENSGMOG00000016431	blm	99	67.048	ENSPNAG00000011714	blm	99	53.899	Pygocentrus_nattereri
ENSGMOG00000016431	blm	90	60.687	ENSRNOG00000011213	Blm	84	62.245	Rattus_norvegicus
ENSGMOG00000016431	blm	90	60.936	ENSRBIG00000029656	BLM	100	51.952	Rhinopithecus_bieti
ENSGMOG00000016431	blm	90	60.936	ENSRROG00000037871	BLM	83	71.458	Rhinopithecus_roxellana
ENSGMOG00000016431	blm	74	69.072	ENSSBOG00000030957	BLM	99	43.640	Saimiri_boliviensis_boliviensis
ENSGMOG00000016431	blm	98	57.858	ENSSHAG00000007988	BLM	88	58.661	Sarcophilus_harrisii
ENSGMOG00000016431	blm	90	68.836	ENSSFOG00015015462	blm	88	70.074	Scleropages_formosus
ENSGMOG00000016431	blm	98	68.807	ENSSMAG00000001120	blm	99	59.437	Scophthalmus_maximus
ENSGMOG00000016431	blm	98	70.000	ENSSDUG00000010955	blm	99	59.231	Seriola_dumerili
ENSGMOG00000016431	blm	98	69.725	ENSSLDG00000000634	blm	99	59.301	Seriola_lalandi_dorsalis
ENSGMOG00000016431	blm	91	54.831	ENSSARG00000006398	BLM	78	48.089	Sorex_araneus
ENSGMOG00000016431	blm	99	55.666	ENSSPUG00000000013	BLM	98	50.430	Sphenodon_punctatus
ENSGMOG00000016431	blm	98	69.977	ENSSPAG00000013999	blm	100	60.112	Stegastes_partitus
ENSGMOG00000016431	blm	90	61.990	ENSSSCG00000001816	BLM	83	63.425	Sus_scrofa
ENSGMOG00000016431	blm	99	51.076	ENSTGUG00000009959	-	99	46.760	Taeniopygia_guttata
ENSGMOG00000016431	blm	90	72.102	ENSTRUG00000019860	blm	99	57.173	Takifugu_rubripes
ENSGMOG00000016431	blm	98	67.787	ENSTNIG00000019246	blm	99	56.766	Tetraodon_nigroviridis
ENSGMOG00000016431	blm	90	61.401	ENSTTRG00000016386	BLM	100	43.943	Tursiops_truncatus
ENSGMOG00000016431	blm	97	58.576	ENSUMAG00000009105	BLM	96	64.560	Ursus_maritimus
ENSGMOG00000016431	blm	89	58.568	ENSVPAG00000000085	BLM	84	59.795	Vicugna_pacos
ENSGMOG00000016431	blm	78	74.036	ENSVVUG00000006402	BLM	83	74.036	Vulpes_vulpes
ENSGMOG00000016431	blm	99	58.218	ENSXETG00000007847	blm	84	63.868	Xenopus_tropicalis
ENSGMOG00000016431	blm	98	66.783	ENSXCOG00000020227	blm	99	56.982	Xiphophorus_couchianus
ENSGMOG00000016431	blm	98	69.814	ENSXMAG00000002951	blm	99	59.486	Xiphophorus_maculatus