EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSGMOG00000016444 (Gene tree)
Gene ID: -
Gene Symbol: htatsf1
Alias: zgc:66252
Full Name: HIV-1 Tat specific factor 1
Gene Type: protein_coding
Species: Gadus_morhua
Status: putative
Strand: Minus strand
Length: 4091 bases
Position: chrGeneScaffold_4321:136-4226
Accession: ZDB-GENE-040426-1578
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSGMOP00000017648	RRM_1	PF00076.22	1.3e-15	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSGMOT00000018083	-	1068	-	ENSGMOP00000017648	356 (aa)	-	UPI00023F3C79

Gene Model

Click here to download ENSGMOG00000016444's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSGMOG00000016444's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSGMOG00000016444	htatsf1	99	63.510	ENSG00000102241	HTATSF1	97	58.590	Homo_sapiens
ENSGMOG00000016444	htatsf1	100	78.611	ENSAPOG00000009823	htatsf1	80	78.611	Acanthochromis_polyacanthus
ENSGMOG00000016444	htatsf1	100	77.322	ENSACIG00000020459	htatsf1	81	77.322	Amphilophus_citrinellus
ENSGMOG00000016444	htatsf1	100	78.904	ENSAOCG00000020994	htatsf1	79	78.904	Amphiprion_ocellaris
ENSGMOG00000016444	htatsf1	100	78.904	ENSAPEG00000016432	htatsf1	80	78.904	Amphiprion_percula
ENSGMOG00000016444	htatsf1	100	76.374	ENSATEG00000008903	htatsf1	82	76.374	Anabas_testudineus
ENSGMOG00000016444	htatsf1	90	68.012	ENSAPLG00000012401	HTATSF1	77	68.012	Anas_platyrhynchos
ENSGMOG00000016444	htatsf1	85	65.347	ENSACAG00000009346	HTATSF1	76	65.347	Anolis_carolinensis
ENSGMOG00000016444	htatsf1	100	75.000	ENSACLG00000008096	htatsf1	81	75.000	Astatotilapia_calliptera
ENSGMOG00000016444	htatsf1	100	68.194	ENSAMXG00000008387	htatsf1	79	69.589	Astyanax_mexicanus
ENSGMOG00000016444	htatsf1	88	38.629	WBGene00022025	Y65B4A.1	70	39.198	Caenorhabditis_elegans
ENSGMOG00000016444	htatsf1	99	62.117	ENSCCAG00000025329	-	51	62.117	Cebus_capucinus
ENSGMOG00000016444	htatsf1	99	68.258	ENSCPBG00000026092	HTATSF1	78	68.258	Chrysemys_picta_bellii
ENSGMOG00000016444	htatsf1	91	53.125	ENSCING00000005914	-	76	47.273	Ciona_intestinalis
ENSGMOG00000016444	htatsf1	98	38.534	ENSCSAVG00000000371	-	89	38.298	Ciona_savignyi
ENSGMOG00000016444	htatsf1	100	76.776	ENSCVAG00000014070	htatsf1	81	76.776	Cyprinodon_variegatus
ENSGMOG00000016444	htatsf1	100	72.626	ENSDARG00000056649	htatsf1	80	72.626	Danio_rerio
ENSGMOG00000016444	htatsf1	94	45.640	FBgn0037081	barc	62	45.930	Drosophila_melanogaster
ENSGMOG00000016444	htatsf1	100	54.133	ENSEBUG00000001534	htatsf1	76	54.400	Eptatretus_burgeri
ENSGMOG00000016444	htatsf1	100	72.905	ENSELUG00000005486	htatsf1	71	74.930	Esox_lucius
ENSGMOG00000016444	htatsf1	99	65.181	ENSFALG00000003728	HTATSF1	79	65.181	Ficedula_albicollis
ENSGMOG00000016444	htatsf1	98	77.933	ENSFHEG00000020286	htatsf1	81	77.933	Fundulus_heteroclitus
ENSGMOG00000016444	htatsf1	99	64.326	ENSGALG00000006410	HTATSF1	79	64.326	Gallus_gallus
ENSGMOG00000016444	htatsf1	100	75.549	ENSGAFG00000003041	htatsf1	80	75.549	Gambusia_affinis
ENSGMOG00000016444	htatsf1	100	73.278	ENSGACG00000020459	htatsf1	81	73.278	Gasterosteus_aculeatus
ENSGMOG00000016444	htatsf1	100	75.272	ENSHBUG00000004392	htatsf1	81	75.272	Haplochromis_burtoni
ENSGMOG00000016444	htatsf1	98	72.269	ENSHCOG00000009056	htatsf1	83	72.626	Hippocampus_comes
ENSGMOG00000016444	htatsf1	100	71.910	ENSIPUG00000017828	htatsf1	76	73.315	Ictalurus_punctatus
ENSGMOG00000016444	htatsf1	100	75.616	ENSKMAG00000007622	htatsf1	81	75.616	Kryptolebias_marmoratus
ENSGMOG00000016444	htatsf1	100	76.033	ENSLBEG00000001154	htatsf1	80	76.033	Labrus_bergylta
ENSGMOG00000016444	htatsf1	100	65.205	ENSLACG00000015989	HTATSF1	80	65.205	Latimeria_chalumnae
ENSGMOG00000016444	htatsf1	100	46.866	ENSLOCG00000015118	htatsf1	77	46.866	Lepisosteus_oculatus
ENSGMOG00000016444	htatsf1	98	63.408	ENSLAFG00000014307	HTATSF1	51	62.849	Loxodonta_africana
ENSGMOG00000016444	htatsf1	99	63.231	ENSMNEG00000024084	HTATSF1	51	63.231	Macaca_nemestrina
ENSGMOG00000016444	htatsf1	100	75.824	ENSMAMG00000021225	htatsf1	83	75.824	Mastacembelus_armatus
ENSGMOG00000016444	htatsf1	100	75.000	ENSMZEG00005000485	htatsf1	81	75.000	Maylandia_zebra
ENSGMOG00000016444	htatsf1	93	66.465	ENSMGAG00000003558	HTATSF1	77	66.465	Meleagris_gallopavo
ENSGMOG00000016444	htatsf1	100	75.749	ENSMMOG00000011013	htatsf1	82	75.749	Mola_mola
ENSGMOG00000016444	htatsf1	99	66.102	ENSMODG00000014087	-	77	66.102	Monodelphis_domestica
ENSGMOG00000016444	htatsf1	68	57.769	ENSMODG00000000199	-	91	56.838	Monodelphis_domestica
ENSGMOG00000016444	htatsf1	100	74.451	ENSMALG00000019977	htatsf1	81	74.451	Monopterus_albus
ENSGMOG00000016444	htatsf1	100	74.728	ENSNBRG00000003818	htatsf1	81	74.731	Neolamprologus_brichardi
ENSGMOG00000016444	htatsf1	99	65.738	ENSMEUG00000004133	-	84	65.738	Notamacropus_eugenii
ENSGMOG00000016444	htatsf1	100	73.925	ENSONIG00000008638	htatsf1	81	73.925	Oreochromis_niloticus
ENSGMOG00000016444	htatsf1	89	66.458	ENSOANG00000011674	-	76	66.458	Ornithorhynchus_anatinus
ENSGMOG00000016444	htatsf1	100	72.131	ENSORLG00000002356	htatsf1	80	72.131	Oryzias_latipes
ENSGMOG00000016444	htatsf1	100	72.131	ENSORLG00020017818	htatsf1	77	72.253	Oryzias_latipes_hni
ENSGMOG00000016444	htatsf1	100	72.131	ENSORLG00015002268	htatsf1	81	72.131	Oryzias_latipes_hsok
ENSGMOG00000016444	htatsf1	100	73.901	ENSOMEG00000007564	htatsf1	80	73.901	Oryzias_melastigma
ENSGMOG00000016444	htatsf1	100	72.346	ENSPKIG00000024852	htatsf1	79	72.346	Paramormyrops_kingsleyae
ENSGMOG00000016444	htatsf1	69	77.551	ENSPSIG00000010192	HTATSF1	69	77.551	Pelodiscus_sinensis
ENSGMOG00000016444	htatsf1	100	73.370	ENSPMGG00000006172	htatsf1	81	73.370	Periophthalmus_magnuspinnatus
ENSGMOG00000016444	htatsf1	99	63.277	ENSPCIG00000018896	-	78	63.277	Phascolarctos_cinereus
ENSGMOG00000016444	htatsf1	99	64.543	ENSPCIG00000030173	-	81	64.543	Phascolarctos_cinereus
ENSGMOG00000016444	htatsf1	100	76.374	ENSPFOG00000007871	htatsf1	79	76.374	Poecilia_formosa
ENSGMOG00000016444	htatsf1	100	76.374	ENSPLAG00000007532	htatsf1	82	76.374	Poecilia_latipinna
ENSGMOG00000016444	htatsf1	100	76.374	ENSPMEG00000000352	htatsf1	82	76.374	Poecilia_mexicana
ENSGMOG00000016444	htatsf1	100	76.099	ENSPREG00000007811	htatsf1	82	76.099	Poecilia_reticulata
ENSGMOG00000016444	htatsf1	100	61.370	ENSPVAG00000010281	HTATSF1	51	61.370	Pteropus_vampyrus
ENSGMOG00000016444	htatsf1	100	74.728	ENSPNYG00000016693	htatsf1	81	74.731	Pundamilia_nyererei
ENSGMOG00000016444	htatsf1	100	69.867	ENSPNAG00000006166	htatsf1	81	69.867	Pygocentrus_nattereri
ENSGMOG00000016444	htatsf1	61	31.739	YNL286W	-	78	31.718	Saccharomyces_cerevisiae
ENSGMOG00000016444	htatsf1	97	66.000	ENSSHAG00000006440	-	89	66.000	Sarcophilus_harrisii
ENSGMOG00000016444	htatsf1	98	63.989	ENSSHAG00000018908	-	78	64.345	Sarcophilus_harrisii
ENSGMOG00000016444	htatsf1	100	69.972	ENSSFOG00015012002	htatsf1	76	69.972	Scleropages_formosus
ENSGMOG00000016444	htatsf1	100	75.278	ENSSMAG00000002970	htatsf1	79	75.278	Scophthalmus_maximus
ENSGMOG00000016444	htatsf1	100	77.473	ENSSDUG00000020002	htatsf1	87	77.473	Seriola_dumerili
ENSGMOG00000016444	htatsf1	100	76.923	ENSSLDG00000016880	htatsf1	81	76.923	Seriola_lalandi_dorsalis
ENSGMOG00000016444	htatsf1	99	65.546	ENSSPUG00000014767	HTATSF1	78	65.546	Sphenodon_punctatus
ENSGMOG00000016444	htatsf1	100	76.923	ENSSPAG00000000732	htatsf1	80	76.923	Stegastes_partitus
ENSGMOG00000016444	htatsf1	99	63.510	ENSSSCG00000023062	HTATSF1	51	63.510	Sus_scrofa
ENSGMOG00000016444	htatsf1	99	65.634	ENSTGUG00000002099	HTATSF1	78	65.634	Taeniopygia_guttata
ENSGMOG00000016444	htatsf1	100	74.176	ENSTRUG00000013383	htatsf1	83	74.176	Takifugu_rubripes
ENSGMOG00000016444	htatsf1	100	73.901	ENSTNIG00000016140	htatsf1	82	73.901	Tetraodon_nigroviridis
ENSGMOG00000016444	htatsf1	96	62.571	ENSTTRG00000002269	HTATSF1	58	62.571	Tursiops_truncatus
ENSGMOG00000016444	htatsf1	100	64.641	ENSXETG00000019749	htatsf1	69	64.641	Xenopus_tropicalis
ENSGMOG00000016444	htatsf1	100	77.247	ENSXCOG00000006912	htatsf1	82	77.247	Xiphophorus_couchianus
ENSGMOG00000016444	htatsf1	100	77.247	ENSXMAG00000000490	htatsf1	82	77.247	Xiphophorus_maculatus