EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSGMOG00000016508 (Gene tree)
Gene ID: -
Gene Symbol: trnau1apa
Alias: trnau1ap|zgc:110606
Full Name: tRNA selenocysteine 1 associated protein 1a
Gene Type: protein_coding
Species: Gadus_morhua
Status: putative
Strand: Minus strand
Length: 5955 bases
Position: chrGeneScaffold_348:32567-38521
Accession: ZDB-GENE-050522-502
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSGMOP00000017718	RRM_1	PF00076.22	4.2e-27	1	2
ENSGMOP00000017718	RRM_1	PF00076.22	4.2e-27	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSGMOT00000018153	-	912	-	ENSGMOP00000017718	303 (aa)	-	UPI00023F3831

Gene Model

Click here to download ENSGMOG00000016508's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSGMOG00000016508's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSGMOG00000016508	trnau1apa	93	39.877	ENSGMOG00000001160	trnau1apb	95	38.462

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSGMOG00000016508	trnau1apa	93	54.930	ENSG00000180098	TRNAU1AP	95	53.846	Homo_sapiens
ENSGMOG00000016508	trnau1apa	99	65.287	ENSAPOG00000007148	TRNAU1AP	100	66.879	Acanthochromis_polyacanthus
ENSGMOG00000016508	trnau1apa	93	55.282	ENSAMEG00000011367	TRNAU1AP	95	53.846	Ailuropoda_melanoleuca
ENSGMOG00000016508	trnau1apa	86	83.784	ENSACIG00000004161	trnau1apa	98	83.784	Amphilophus_citrinellus
ENSGMOG00000016508	trnau1apa	99	66.346	ENSAOCG00000008056	trnau1apa	100	67.949	Amphiprion_ocellaris
ENSGMOG00000016508	trnau1apa	99	66.346	ENSAPEG00000008868	trnau1apa	100	67.949	Amphiprion_percula
ENSGMOG00000016508	trnau1apa	99	64.151	ENSATEG00000012140	trnau1apa	100	64.151	Anabas_testudineus
ENSGMOG00000016508	trnau1apa	92	54.643	ENSAPLG00000002606	TRNAU1AP	99	53.710	Anas_platyrhynchos
ENSGMOG00000016508	trnau1apa	62	42.857	ENSACAG00000004205	-	69	41.270	Anolis_carolinensis
ENSGMOG00000016508	trnau1apa	92	45.000	ENSACAG00000003995	-	94	45.390	Anolis_carolinensis
ENSGMOG00000016508	trnau1apa	93	54.930	ENSANAG00000018976	TRNAU1AP	95	53.846	Aotus_nancymaae
ENSGMOG00000016508	trnau1apa	99	66.343	ENSACLG00000018515	trnau1apa	100	64.725	Astatotilapia_calliptera
ENSGMOG00000016508	trnau1apa	99	49.838	ENSAMXG00000013750	trnau1apa	97	48.052	Astyanax_mexicanus
ENSGMOG00000016508	trnau1apa	85	74.324	ENSAMXG00000029240	-	95	74.324	Astyanax_mexicanus
ENSGMOG00000016508	trnau1apa	93	54.577	ENSBTAG00000010393	TRNAU1AP	95	53.497	Bos_taurus
ENSGMOG00000016508	trnau1apa	93	54.930	ENSCJAG00000009717	TRNAU1AP	87	63.014	Callithrix_jacchus
ENSGMOG00000016508	trnau1apa	93	54.930	ENSCAFG00000011735	TRNAU1AP	95	53.846	Canis_familiaris
ENSGMOG00000016508	trnau1apa	93	54.930	ENSCAFG00020023584	TRNAU1AP	95	53.846	Canis_lupus_dingo
ENSGMOG00000016508	trnau1apa	93	54.577	ENSCHIG00000023215	TRNAU1AP	95	53.497	Capra_hircus
ENSGMOG00000016508	trnau1apa	93	54.930	ENSTSYG00000003506	TRNAU1AP	87	63.014	Carlito_syrichta
ENSGMOG00000016508	trnau1apa	93	54.930	ENSCPOG00000001925	TRNAU1AP	95	53.846	Cavia_porcellus
ENSGMOG00000016508	trnau1apa	93	54.930	ENSCCAG00000037506	TRNAU1AP	87	63.014	Cebus_capucinus
ENSGMOG00000016508	trnau1apa	93	54.930	ENSCATG00000044617	TRNAU1AP	87	63.014	Cercocebus_atys
ENSGMOG00000016508	trnau1apa	93	54.930	ENSCLAG00000008223	TRNAU1AP	95	53.846	Chinchilla_lanigera
ENSGMOG00000016508	trnau1apa	93	54.930	ENSCSAG00000001014	TRNAU1AP	95	53.846	Chlorocebus_sabaeus
ENSGMOG00000016508	trnau1apa	89	54.779	ENSCPBG00000000121	TRNAU1AP	96	55.109	Chrysemys_picta_bellii
ENSGMOG00000016508	trnau1apa	56	43.787	ENSCSAVG00000011781	-	87	43.787	Ciona_savignyi
ENSGMOG00000016508	trnau1apa	93	47.535	ENSCANG00000041949	TRNAU1AP	93	53.977	Colobus_angolensis_palliatus
ENSGMOG00000016508	trnau1apa	93	54.930	ENSCGRG00001004713	Trnau1ap	95	53.846	Cricetulus_griseus_chok1gshd
ENSGMOG00000016508	trnau1apa	93	54.930	ENSCGRG00000014532	Trnau1ap	95	53.846	Cricetulus_griseus_crigri
ENSGMOG00000016508	trnau1apa	99	62.461	ENSCSEG00000006663	trnau1apa	100	61.465	Cynoglossus_semilaevis
ENSGMOG00000016508	trnau1apa	99	63.987	ENSCVAG00000018069	trnau1apa	99	63.023	Cyprinodon_variegatus
ENSGMOG00000016508	trnau1apa	99	45.955	ENSDARG00000101323	trnau1apa	95	44.872	Danio_rerio
ENSGMOG00000016508	trnau1apa	58	52.273	ENSDNOG00000047959	-	90	52.273	Dasypus_novemcinctus
ENSGMOG00000016508	trnau1apa	93	54.930	ENSDNOG00000033009	TRNAU1AP	95	53.846	Dasypus_novemcinctus
ENSGMOG00000016508	trnau1apa	92	51.957	ENSDORG00000006349	Trnau1ap	91	54.338	Dipodomys_ordii
ENSGMOG00000016508	trnau1apa	92	33.846	FBgn0031607	CG15440	52	41.714	Drosophila_melanogaster
ENSGMOG00000016508	trnau1apa	79	53.112	ENSETEG00000012594	TRNAU1AP	94	51.852	Echinops_telfairi
ENSGMOG00000016508	trnau1apa	93	54.930	ENSEASG00005010062	TRNAU1AP	90	63.014	Equus_asinus_asinus
ENSGMOG00000016508	trnau1apa	93	54.930	ENSECAG00000012980	TRNAU1AP	90	63.014	Equus_caballus
ENSGMOG00000016508	trnau1apa	85	75.676	ENSELUG00000022790	-	93	75.676	Esox_lucius
ENSGMOG00000016508	trnau1apa	99	64.935	ENSELUG00000017686	trnau1apa	100	64.610	Esox_lucius
ENSGMOG00000016508	trnau1apa	93	54.930	ENSFCAG00000013401	TRNAU1AP	95	53.846	Felis_catus
ENSGMOG00000016508	trnau1apa	89	54.412	ENSFALG00000001371	TRNAU1AP	96	54.745	Ficedula_albicollis
ENSGMOG00000016508	trnau1apa	93	54.930	ENSFDAG00000018599	TRNAU1AP	95	53.846	Fukomys_damarensis
ENSGMOG00000016508	trnau1apa	76	68.443	ENSFHEG00000018232	trnau1apa	77	68.376	Fundulus_heteroclitus
ENSGMOG00000016508	trnau1apa	62	40.385	ENSGALG00000012721	C2H6orf52	75	38.049	Gallus_gallus
ENSGMOG00000016508	trnau1apa	93	54.417	ENSGALG00000001310	-	95	55.088	Gallus_gallus
ENSGMOG00000016508	trnau1apa	80	66.400	ENSGAFG00000004928	trnau1apa	85	68.996	Gambusia_affinis
ENSGMOG00000016508	trnau1apa	100	68.506	ENSGACG00000001443	trnau1apa	100	67.532	Gasterosteus_aculeatus
ENSGMOG00000016508	trnau1apa	89	54.779	ENSGAGG00000004940	TRNAU1AP	96	55.109	Gopherus_agassizii
ENSGMOG00000016508	trnau1apa	93	54.930	ENSGGOG00000003511	TRNAU1AP	87	63.014	Gorilla_gorilla
ENSGMOG00000016508	trnau1apa	99	65.287	ENSHBUG00000002510	trnau1apa	100	63.694	Haplochromis_burtoni
ENSGMOG00000016508	trnau1apa	93	54.930	ENSHGLG00000010380	TRNAU1AP	95	53.846	Heterocephalus_glaber_female
ENSGMOG00000016508	trnau1apa	93	52.817	ENSHGLG00100012699	TRNAU1AP	95	51.748	Heterocephalus_glaber_male
ENSGMOG00000016508	trnau1apa	93	62.457	ENSHCOG00000014770	trnau1apa	93	62.116	Hippocampus_comes
ENSGMOG00000016508	trnau1apa	93	54.930	ENSSTOG00000000079	TRNAU1AP	95	53.846	Ictidomys_tridecemlineatus
ENSGMOG00000016508	trnau1apa	93	54.930	ENSJJAG00000010128	Trnau1ap	95	53.846	Jaculus_jaculus
ENSGMOG00000016508	trnau1apa	99	65.495	ENSKMAG00000001230	trnau1apa	100	65.176	Kryptolebias_marmoratus
ENSGMOG00000016508	trnau1apa	99	68.770	ENSLBEG00000011683	trnau1apa	100	65.506	Labrus_bergylta
ENSGMOG00000016508	trnau1apa	95	48.611	ENSLACG00000005541	TRNAU1AP	97	49.141	Latimeria_chalumnae
ENSGMOG00000016508	trnau1apa	95	56.552	ENSLOCG00000004041	trnau1apa	98	55.556	Lepisosteus_oculatus
ENSGMOG00000016508	trnau1apa	93	54.930	ENSLAFG00000007628	TRNAU1AP	95	53.846	Loxodonta_africana
ENSGMOG00000016508	trnau1apa	93	54.930	ENSMFAG00000043751	TRNAU1AP	87	63.014	Macaca_fascicularis
ENSGMOG00000016508	trnau1apa	93	54.930	ENSMMUG00000006561	TRNAU1AP	95	53.846	Macaca_mulatta
ENSGMOG00000016508	trnau1apa	93	54.930	ENSMNEG00000044201	TRNAU1AP	87	63.014	Macaca_nemestrina
ENSGMOG00000016508	trnau1apa	93	54.930	ENSMLEG00000015649	TRNAU1AP	87	63.014	Mandrillus_leucophaeus
ENSGMOG00000016508	trnau1apa	99	64.968	ENSMAMG00000001247	trnau1apa	100	65.079	Mastacembelus_armatus
ENSGMOG00000016508	trnau1apa	99	66.343	ENSMZEG00005017722	trnau1apa	100	64.725	Maylandia_zebra
ENSGMOG00000016508	trnau1apa	91	54.874	ENSMGAG00000002105	TRNAU1AP	96	53.737	Meleagris_gallopavo
ENSGMOG00000016508	trnau1apa	93	54.930	ENSMICG00000008386	TRNAU1AP	87	63.014	Microcebus_murinus
ENSGMOG00000016508	trnau1apa	93	54.930	ENSMOCG00000011189	Trnau1ap	95	53.846	Microtus_ochrogaster
ENSGMOG00000016508	trnau1apa	100	64.194	ENSMMOG00000012107	trnau1apa	100	62.500	Mola_mola
ENSGMOG00000016508	trnau1apa	93	55.124	ENSMODG00000010927	TRNAU1AP	95	52.448	Monodelphis_domestica
ENSGMOG00000016508	trnau1apa	99	66.242	ENSMALG00000016778	trnau1apa	100	66.242	Monopterus_albus
ENSGMOG00000016508	trnau1apa	93	54.930	MGP_CAROLIEiJ_G0026563	Trnau1ap	95	53.846	Mus_caroli
ENSGMOG00000016508	trnau1apa	93	54.930	ENSMUSG00000028898	Trnau1ap	95	53.846	Mus_musculus
ENSGMOG00000016508	trnau1apa	93	54.930	MGP_PahariEiJ_G0028896	Trnau1ap	86	63.014	Mus_pahari
ENSGMOG00000016508	trnau1apa	93	54.930	MGP_SPRETEiJ_G0027544	Trnau1ap	95	53.846	Mus_spretus
ENSGMOG00000016508	trnau1apa	93	54.930	ENSMPUG00000015511	TRNAU1AP	95	53.846	Mustela_putorius_furo
ENSGMOG00000016508	trnau1apa	93	54.930	ENSMLUG00000012586	TRNAU1AP	95	53.846	Myotis_lucifugus
ENSGMOG00000016508	trnau1apa	93	54.930	ENSNGAG00000015881	Trnau1ap	95	53.846	Nannospalax_galili
ENSGMOG00000016508	trnau1apa	99	62.092	ENSNBRG00000001758	trnau1apa	99	60.458	Neolamprologus_brichardi
ENSGMOG00000016508	trnau1apa	93	54.930	ENSNLEG00000009822	TRNAU1AP	87	63.014	Nomascus_leucogenys
ENSGMOG00000016508	trnau1apa	91	54.710	ENSMEUG00000006117	TRNAU1AP	96	51.971	Notamacropus_eugenii
ENSGMOG00000016508	trnau1apa	93	54.930	ENSODEG00000002970	TRNAU1AP	95	53.846	Octodon_degus
ENSGMOG00000016508	trnau1apa	79	67.611	ENSONIG00000004715	trnau1apa	83	69.907	Oreochromis_niloticus
ENSGMOG00000016508	trnau1apa	93	43.416	ENSOANG00000005325	-	95	42.908	Ornithorhynchus_anatinus
ENSGMOG00000016508	trnau1apa	93	46.809	ENSOCUG00000002353	-	71	78.125	Oryctolagus_cuniculus
ENSGMOG00000016508	trnau1apa	85	44.015	ENSOCUG00000006834	-	82	44.292	Oryctolagus_cuniculus
ENSGMOG00000016508	trnau1apa	93	53.873	ENSOCUG00000011704	-	95	52.797	Oryctolagus_cuniculus
ENSGMOG00000016508	trnau1apa	99	63.107	ENSORLG00000010428	trnau1apa	100	60.714	Oryzias_latipes
ENSGMOG00000016508	trnau1apa	99	63.107	ENSORLG00020000926	trnau1ap	100	60.714	Oryzias_latipes_hni
ENSGMOG00000016508	trnau1apa	99	63.107	ENSORLG00015009858	trnau1ap	100	60.714	Oryzias_latipes_hsok
ENSGMOG00000016508	trnau1apa	99	62.783	ENSOMEG00000007873	trnau1apa	100	60.714	Oryzias_melastigma
ENSGMOG00000016508	trnau1apa	93	54.930	ENSOGAG00000002274	TRNAU1AP	95	53.846	Otolemur_garnettii
ENSGMOG00000016508	trnau1apa	93	54.577	ENSOARG00000002843	TRNAU1AP	95	53.497	Ovis_aries
ENSGMOG00000016508	trnau1apa	93	54.930	ENSPPAG00000033927	TRNAU1AP	87	63.014	Pan_paniscus
ENSGMOG00000016508	trnau1apa	93	54.930	ENSPPRG00000004416	TRNAU1AP	95	53.846	Panthera_pardus
ENSGMOG00000016508	trnau1apa	93	54.930	ENSPTIG00000016677	TRNAU1AP	95	53.846	Panthera_tigris_altaica
ENSGMOG00000016508	trnau1apa	85	48.669	ENSPTRG00000000434	-	90	49.035	Pan_troglodytes
ENSGMOG00000016508	trnau1apa	93	54.930	ENSPANG00000016019	TRNAU1AP	87	63.014	Papio_anubis
ENSGMOG00000016508	trnau1apa	99	54.397	ENSPKIG00000015511	trnau1apa	99	50.980	Paramormyrops_kingsleyae
ENSGMOG00000016508	trnau1apa	89	72.973	ENSPKIG00000022205	-	99	72.973	Paramormyrops_kingsleyae
ENSGMOG00000016508	trnau1apa	89	55.474	ENSPSIG00000006864	TRNAU1AP	96	53.455	Pelodiscus_sinensis
ENSGMOG00000016508	trnau1apa	99	59.672	ENSPMGG00000023893	trnau1apa	98	58.333	Periophthalmus_magnuspinnatus
ENSGMOG00000016508	trnau1apa	93	54.577	ENSPEMG00000007877	Trnau1ap	95	53.497	Peromyscus_maniculatus_bairdii
ENSGMOG00000016508	trnau1apa	73	47.748	ENSPMAG00000005934	trnau1apa	90	48.095	Petromyzon_marinus
ENSGMOG00000016508	trnau1apa	57	51.445	ENSPMAG00000000592	trnau1apa	95	51.445	Petromyzon_marinus
ENSGMOG00000016508	trnau1apa	99	63.023	ENSPFOG00000008100	trnau1apa	99	63.666	Poecilia_formosa
ENSGMOG00000016508	trnau1apa	95	61.873	ENSPLAG00000010236	trnau1apa	99	62.542	Poecilia_latipinna
ENSGMOG00000016508	trnau1apa	99	60.968	ENSPMEG00000016387	trnau1apa	97	61.613	Poecilia_mexicana
ENSGMOG00000016508	trnau1apa	84	74.286	ENSPREG00000019821	trnau1apa	95	74.286	Poecilia_reticulata
ENSGMOG00000016508	trnau1apa	83	46.693	ENSPPYG00000001639	-	95	45.560	Pongo_abelii
ENSGMOG00000016508	trnau1apa	93	54.930	ENSPCOG00000027712	-	95	53.846	Propithecus_coquereli
ENSGMOG00000016508	trnau1apa	92	39.068	ENSPCOG00000023470	-	95	43.165	Propithecus_coquereli
ENSGMOG00000016508	trnau1apa	93	54.930	ENSPVAG00000017214	TRNAU1AP	95	53.846	Pteropus_vampyrus
ENSGMOG00000016508	trnau1apa	99	65.287	ENSPNYG00000010130	trnau1apa	100	63.694	Pundamilia_nyererei
ENSGMOG00000016508	trnau1apa	99	47.742	ENSPNAG00000024905	trnau1apa	97	46.429	Pygocentrus_nattereri
ENSGMOG00000016508	trnau1apa	92	48.571	ENSRNOG00000055344	Trnau1ap	72	54.091	Rattus_norvegicus
ENSGMOG00000016508	trnau1apa	93	54.930	ENSRBIG00000029083	TRNAU1AP	87	63.014	Rhinopithecus_bieti
ENSGMOG00000016508	trnau1apa	93	54.930	ENSRROG00000029128	TRNAU1AP	87	63.014	Rhinopithecus_roxellana
ENSGMOG00000016508	trnau1apa	93	54.930	ENSSBOG00000021299	TRNAU1AP	87	63.014	Saimiri_boliviensis_boliviensis
ENSGMOG00000016508	trnau1apa	93	55.124	ENSSHAG00000008108	TRNAU1AP	95	52.448	Sarcophilus_harrisii
ENSGMOG00000016508	trnau1apa	99	59.006	ENSSMAG00000020851	trnau1apa	100	62.069	Scophthalmus_maximus
ENSGMOG00000016508	trnau1apa	99	64.038	ENSSDUG00000011734	trnau1apa	100	64.038	Seriola_dumerili
ENSGMOG00000016508	trnau1apa	99	53.795	ENSSLDG00000012101	trnau1apa	99	53.795	Seriola_lalandi_dorsalis
ENSGMOG00000016508	trnau1apa	91	54.874	ENSSARG00000007536	TRNAU1AP	96	53.763	Sorex_araneus
ENSGMOG00000016508	trnau1apa	57	55.233	ENSSPUG00000010415	-	94	50.568	Sphenodon_punctatus
ENSGMOG00000016508	trnau1apa	93	51.590	ENSSPUG00000010400	-	95	50.699	Sphenodon_punctatus
ENSGMOG00000016508	trnau1apa	99	66.134	ENSSPAG00000005029	trnau1apa	100	66.134	Stegastes_partitus
ENSGMOG00000016508	trnau1apa	93	54.930	ENSSSCG00000030284	TRNAU1AP	95	53.846	Sus_scrofa
ENSGMOG00000016508	trnau1apa	62	44.330	ENSTGUG00000005908	-	93	44.330	Taeniopygia_guttata
ENSGMOG00000016508	trnau1apa	91	55.235	ENSTGUG00000000735	-	96	55.396	Taeniopygia_guttata
ENSGMOG00000016508	trnau1apa	99	63.226	ENSTRUG00000003352	trnau1apa	100	62.136	Takifugu_rubripes
ENSGMOG00000016508	trnau1apa	99	59.807	ENSTNIG00000006129	trnau1apa	100	59.807	Tetraodon_nigroviridis
ENSGMOG00000016508	trnau1apa	79	60.833	ENSTBEG00000008049	-	94	59.091	Tupaia_belangeri
ENSGMOG00000016508	trnau1apa	93	54.930	ENSTTRG00000001854	TRNAU1AP	95	53.846	Tursiops_truncatus
ENSGMOG00000016508	trnau1apa	89	54.212	ENSUAMG00000008789	TRNAU1AP	96	53.091	Ursus_americanus
ENSGMOG00000016508	trnau1apa	93	54.577	ENSUMAG00000011068	TRNAU1AP	95	53.497	Ursus_maritimus
ENSGMOG00000016508	trnau1apa	93	48.311	ENSVPAG00000006778	TRNAU1AP	96	47.315	Vicugna_pacos
ENSGMOG00000016508	trnau1apa	92	54.255	ENSVVUG00000012518	TRNAU1AP	88	53.169	Vulpes_vulpes
ENSGMOG00000016508	trnau1apa	99	62.701	ENSXMAG00000017361	trnau1apa	99	63.987	Xiphophorus_maculatus