EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSGMOG00000016584 (Gene tree)
Gene ID: -
Gene Symbol: rbm39b
Alias: rbm39l|rnpc2l|wu:fa97g07|wu:fb09c08|zgc:112139|zgc:113117
Full Name: RNA binding motif protein 39b
Gene Type: protein_coding
Species: Gadus_morhua
Status: putative
Strand: Minus strand
Length: 7171 bases
Position: chrGeneScaffold_4578:2634-9804
Accession: ZDB-GENE-050327-97
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSGMOP00000017817	RRM_1	PF00076.22	1.8e-22	1	2
ENSGMOP00000017817	RRM_1	PF00076.22	1.8e-22	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSGMOT00000018256	-	1509	-	ENSGMOP00000017817	502 (aa)	-	UPI00023F3965

Gene Model

Click here to download ENSGMOG00000016584's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSGMOG00000016584's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSGMOG00000016584	rbm39b	61	87.500	ENSG00000131051	RBM39	99	63.830	Homo_sapiens
ENSGMOG00000016584	rbm39b	61	81.250	ENSAPOG00000019452	-	60	86.207	Acanthochromis_polyacanthus
ENSGMOG00000016584	rbm39b	61	87.500	ENSAMEG00000009940	RBM39	62	87.500	Ailuropoda_melanoleuca
ENSGMOG00000016584	rbm39b	61	86.207	ENSACIG00000022910	-	60	86.207	Amphilophus_citrinellus
ENSGMOG00000016584	rbm39b	61	86.207	ENSAOCG00000007223	-	60	86.207	Amphiprion_ocellaris
ENSGMOG00000016584	rbm39b	61	87.500	ENSAOCG00000006206	rbm39b	61	87.500	Amphiprion_ocellaris
ENSGMOG00000016584	rbm39b	61	86.207	ENSAPEG00000021927	-	59	86.207	Amphiprion_percula
ENSGMOG00000016584	rbm39b	61	87.500	ENSAPEG00000011141	rbm39b	61	87.500	Amphiprion_percula
ENSGMOG00000016584	rbm39b	61	90.625	ENSATEG00000007482	rbm39b	61	90.625	Anabas_testudineus
ENSGMOG00000016584	rbm39b	61	84.375	ENSAPLG00000003477	RBM39	62	84.375	Anas_platyrhynchos
ENSGMOG00000016584	rbm39b	61	87.500	ENSACAG00000006436	RBM39	63	87.500	Anolis_carolinensis
ENSGMOG00000016584	rbm39b	61	75.000	ENSANAG00000038387	-	61	75.000	Aotus_nancymaae
ENSGMOG00000016584	rbm39b	61	87.500	ENSANAG00000024610	RBM39	62	87.500	Aotus_nancymaae
ENSGMOG00000016584	rbm39b	61	87.500	ENSACLG00000024774	rbm39b	61	87.500	Astatotilapia_calliptera
ENSGMOG00000016584	rbm39b	61	81.250	ENSACLG00000014339	-	60	86.207	Astatotilapia_calliptera
ENSGMOG00000016584	rbm39b	61	81.250	ENSAMXG00000013781	rbm39a	62	81.250	Astyanax_mexicanus
ENSGMOG00000016584	rbm39b	61	87.500	ENSAMXG00000012946	rbm39b	65	87.500	Astyanax_mexicanus
ENSGMOG00000016584	rbm39b	61	87.500	ENSBTAG00000003949	RBM39	63	87.500	Bos_taurus
ENSGMOG00000016584	rbm39b	61	87.500	ENSCJAG00000017535	RBM39	62	87.500	Callithrix_jacchus
ENSGMOG00000016584	rbm39b	61	87.500	ENSCAFG00000008327	RBM39	62	87.500	Canis_familiaris
ENSGMOG00000016584	rbm39b	61	87.500	ENSCAFG00020005676	RBM39	62	87.500	Canis_lupus_dingo
ENSGMOG00000016584	rbm39b	61	78.125	ENSCHIG00000014731	-	63	78.125	Capra_hircus
ENSGMOG00000016584	rbm39b	61	87.500	ENSTSYG00000005605	RBM39	62	87.500	Carlito_syrichta
ENSGMOG00000016584	rbm39b	61	87.500	ENSCAPG00000012702	-	60	87.500	Cavia_aperea
ENSGMOG00000016584	rbm39b	61	78.125	ENSCCAG00000035313	-	65	78.125	Cebus_capucinus
ENSGMOG00000016584	rbm39b	61	87.500	ENSCCAG00000031689	-	62	87.500	Cebus_capucinus
ENSGMOG00000016584	rbm39b	61	81.250	ENSCATG00000030221	-	65	81.250	Cercocebus_atys
ENSGMOG00000016584	rbm39b	61	87.500	ENSCLAG00000016940	RBM39	62	87.500	Chinchilla_lanigera
ENSGMOG00000016584	rbm39b	61	87.500	ENSCPBG00000011600	RBM39	63	87.500	Chrysemys_picta_bellii
ENSGMOG00000016584	rbm39b	61	87.500	ENSCANG00000031033	-	63	87.500	Colobus_angolensis_palliatus
ENSGMOG00000016584	rbm39b	61	87.500	ENSCGRG00001013983	Rbm39	62	87.500	Cricetulus_griseus_chok1gshd
ENSGMOG00000016584	rbm39b	61	87.500	ENSCGRG00000015067	Rbm39	63	87.500	Cricetulus_griseus_crigri
ENSGMOG00000016584	rbm39b	61	78.125	ENSCSEG00000020394	-	61	82.759	Cynoglossus_semilaevis
ENSGMOG00000016584	rbm39b	61	87.500	ENSCSEG00000021307	rbm39b	61	87.500	Cynoglossus_semilaevis
ENSGMOG00000016584	rbm39b	61	87.500	ENSCVAG00000015985	rbm39b	62	87.500	Cyprinodon_variegatus
ENSGMOG00000016584	rbm39b	61	84.375	ENSDARG00000011613	rbm39a	99	68.720	Danio_rerio
ENSGMOG00000016584	rbm39b	61	71.875	ENSDARG00000041853	rbm39b	99	63.158	Danio_rerio
ENSGMOG00000016584	rbm39b	61	87.500	ENSDNOG00000025219	RBM39	62	87.500	Dasypus_novemcinctus
ENSGMOG00000016584	rbm39b	61	87.500	ENSDORG00000000233	Rbm39	62	87.500	Dipodomys_ordii
ENSGMOG00000016584	rbm39b	57	87.500	ENSETEG00000016295	RBM39	58	87.500	Echinops_telfairi
ENSGMOG00000016584	rbm39b	61	87.500	ENSECAG00000013423	RBM39	62	87.500	Equus_caballus
ENSGMOG00000016584	rbm39b	61	87.500	ENSEEUG00000004390	RBM39	62	87.500	Erinaceus_europaeus
ENSGMOG00000016584	rbm39b	61	87.500	ENSELUG00000001796	rbm39b	63	87.500	Esox_lucius
ENSGMOG00000016584	rbm39b	61	87.500	ENSFCAG00000003233	RBM39	62	87.500	Felis_catus
ENSGMOG00000016584	rbm39b	61	70.000	ENSFDAG00000015069	-	61	70.000	Fukomys_damarensis
ENSGMOG00000016584	rbm39b	61	87.500	ENSFDAG00000021510	-	62	87.500	Fukomys_damarensis
ENSGMOG00000016584	rbm39b	61	87.500	ENSFHEG00000003421	rbm39b	62	87.500	Fundulus_heteroclitus
ENSGMOG00000016584	rbm39b	61	84.375	ENSGALG00000001550	RBM39	63	84.375	Gallus_gallus
ENSGMOG00000016584	rbm39b	61	87.500	ENSGAFG00000021058	rbm39b	62	87.500	Gambusia_affinis
ENSGMOG00000016584	rbm39b	61	87.500	ENSGACG00000002797	rbm39b	64	87.500	Gasterosteus_aculeatus
ENSGMOG00000016584	rbm39b	61	87.500	ENSGAGG00000015140	RBM39	63	87.500	Gopherus_agassizii
ENSGMOG00000016584	rbm39b	61	87.500	ENSGGOG00000003950	RBM39	62	87.500	Gorilla_gorilla
ENSGMOG00000016584	rbm39b	61	87.500	ENSHBUG00000006158	rbm39b	61	87.500	Haplochromis_burtoni
ENSGMOG00000016584	rbm39b	61	81.250	ENSHBUG00000009017	-	60	86.207	Haplochromis_burtoni
ENSGMOG00000016584	rbm39b	58	83.871	ENSHGLG00000001772	-	50	83.871	Heterocephalus_glaber_female
ENSGMOG00000016584	rbm39b	59	78.125	ENSHGLG00000006013	-	60	78.125	Heterocephalus_glaber_female
ENSGMOG00000016584	rbm39b	61	87.500	ENSHGLG00000017871	RBM39	62	87.500	Heterocephalus_glaber_female
ENSGMOG00000016584	rbm39b	53	60.432	ENSHGLG00000010196	-	58	54.417	Heterocephalus_glaber_female
ENSGMOG00000016584	rbm39b	61	87.500	ENSHGLG00100019327	-	63	87.500	Heterocephalus_glaber_male
ENSGMOG00000016584	rbm39b	55	48.951	ENSHGLG00100000829	-	65	49.281	Heterocephalus_glaber_male
ENSGMOG00000016584	rbm39b	59	75.000	ENSHGLG00100011532	-	62	75.000	Heterocephalus_glaber_male
ENSGMOG00000016584	rbm39b	61	87.500	ENSHCOG00000009222	rbm39b	62	87.500	Hippocampus_comes
ENSGMOG00000016584	rbm39b	61	71.875	ENSHCOG00000014668	-	60	75.862	Hippocampus_comes
ENSGMOG00000016584	rbm39b	61	90.625	ENSIPUG00000012202	rbm39b	61	90.625	Ictalurus_punctatus
ENSGMOG00000016584	rbm39b	55	65.574	ENSSTOG00000030698	RBM39	71	71.096	Ictidomys_tridecemlineatus
ENSGMOG00000016584	rbm39b	61	87.500	ENSKMAG00000016811	rbm39b	61	87.500	Kryptolebias_marmoratus
ENSGMOG00000016584	rbm39b	55	71.377	ENSLBEG00000018799	-	52	74.021	Labrus_bergylta
ENSGMOG00000016584	rbm39b	61	84.375	ENSLACG00000018811	RBM39	63	84.375	Latimeria_chalumnae
ENSGMOG00000016584	rbm39b	60	77.778	ENSLACG00000016576	-	62	77.778	Latimeria_chalumnae
ENSGMOG00000016584	rbm39b	61	90.625	ENSLOCG00000006562	rbm39a	63	90.625	Lepisosteus_oculatus
ENSGMOG00000016584	rbm39b	61	87.500	ENSLAFG00000010346	RBM39	63	87.500	Loxodonta_africana
ENSGMOG00000016584	rbm39b	61	87.500	ENSMMUG00000031284	RBM39	62	87.500	Macaca_mulatta
ENSGMOG00000016584	rbm39b	61	87.500	ENSMNEG00000040217	RBM39	62	87.500	Macaca_nemestrina
ENSGMOG00000016584	rbm39b	61	78.125	ENSMLEG00000030882	-	65	78.125	Mandrillus_leucophaeus
ENSGMOG00000016584	rbm39b	61	81.250	ENSMAMG00000009683	-	59	86.207	Mastacembelus_armatus
ENSGMOG00000016584	rbm39b	61	90.625	ENSMAMG00000011883	rbm39b	62	90.625	Mastacembelus_armatus
ENSGMOG00000016584	rbm39b	61	87.500	ENSMZEG00005023724	rbm39b	53	87.500	Maylandia_zebra
ENSGMOG00000016584	rbm39b	61	81.250	ENSMZEG00005012065	-	60	86.207	Maylandia_zebra
ENSGMOG00000016584	rbm39b	61	84.375	ENSMGAG00000001509	RBM39	62	84.375	Meleagris_gallopavo
ENSGMOG00000016584	rbm39b	60	87.500	ENSMICG00000035049	-	63	87.500	Microcebus_murinus
ENSGMOG00000016584	rbm39b	61	87.500	ENSMICG00000001668	RBM39	62	87.500	Microcebus_murinus
ENSGMOG00000016584	rbm39b	60	87.500	ENSMOCG00000017326	Rbm39	62	87.500	Microtus_ochrogaster
ENSGMOG00000016584	rbm39b	61	87.500	ENSMMOG00000020616	rbm39b	62	87.500	Mola_mola
ENSGMOG00000016584	rbm39b	61	87.500	ENSMODG00000001557	RBM39	62	87.500	Monodelphis_domestica
ENSGMOG00000016584	rbm39b	61	76.471	ENSMALG00000020628	-	60	76.471	Monopterus_albus
ENSGMOG00000016584	rbm39b	61	90.625	ENSMALG00000021595	rbm39b	61	90.625	Monopterus_albus
ENSGMOG00000016584	rbm39b	61	87.500	MGP_CAROLIEiJ_G0024554	Rbm39	99	69.565	Mus_caroli
ENSGMOG00000016584	rbm39b	61	87.500	ENSMUSG00000027620	Rbm39	99	69.565	Mus_musculus
ENSGMOG00000016584	rbm39b	61	87.500	MGP_PahariEiJ_G0025999	Rbm39	99	64.130	Mus_pahari
ENSGMOG00000016584	rbm39b	61	87.500	MGP_SPRETEiJ_G0025476	Rbm39	99	69.565	Mus_spretus
ENSGMOG00000016584	rbm39b	61	87.500	ENSMPUG00000017786	RBM39	62	87.500	Mustela_putorius_furo
ENSGMOG00000016584	rbm39b	61	87.500	ENSMLUG00000003000	RBM39	62	87.500	Myotis_lucifugus
ENSGMOG00000016584	rbm39b	61	87.500	ENSNGAG00000016684	Rbm39	62	87.500	Nannospalax_galili
ENSGMOG00000016584	rbm39b	61	78.125	ENSNBRG00000007057	-	57	82.759	Neolamprologus_brichardi
ENSGMOG00000016584	rbm39b	61	87.500	ENSNBRG00000017035	rbm39b	60	87.500	Neolamprologus_brichardi
ENSGMOG00000016584	rbm39b	61	95.652	ENSNLEG00000010350	-	60	95.652	Nomascus_leucogenys
ENSGMOG00000016584	rbm39b	54	84.375	ENSNLEG00000036235	-	60	84.375	Nomascus_leucogenys
ENSGMOG00000016584	rbm39b	55	62.046	ENSOPRG00000002183	RBM39	63	65.000	Ochotona_princeps
ENSGMOG00000016584	rbm39b	61	87.500	ENSODEG00000000850	-	62	87.500	Octodon_degus
ENSGMOG00000016584	rbm39b	61	86.667	ENSODEG00000013774	-	61	86.667	Octodon_degus
ENSGMOG00000016584	rbm39b	61	87.500	ENSONIG00000017310	rbm39b	62	87.500	Oreochromis_niloticus
ENSGMOG00000016584	rbm39b	61	81.250	ENSONIG00000000274	-	60	86.207	Oreochromis_niloticus
ENSGMOG00000016584	rbm39b	61	87.500	ENSOCUG00000007050	RBM39	62	87.500	Oryctolagus_cuniculus
ENSGMOG00000016584	rbm39b	61	87.500	ENSORLG00000010370	rbm39b	62	87.500	Oryzias_latipes
ENSGMOG00000016584	rbm39b	61	81.250	ENSORLG00000009919	-	60	81.250	Oryzias_latipes
ENSGMOG00000016584	rbm39b	61	87.500	ENSORLG00020021077	rbm39b	62	87.500	Oryzias_latipes_hni
ENSGMOG00000016584	rbm39b	61	81.250	ENSORLG00020006098	-	60	81.250	Oryzias_latipes_hni
ENSGMOG00000016584	rbm39b	61	87.500	ENSORLG00015016695	rbm39b	62	87.500	Oryzias_latipes_hsok
ENSGMOG00000016584	rbm39b	61	81.250	ENSORLG00015002315	-	60	81.250	Oryzias_latipes_hsok
ENSGMOG00000016584	rbm39b	61	87.500	ENSOMEG00000010704	rbm39b	62	87.500	Oryzias_melastigma
ENSGMOG00000016584	rbm39b	61	81.250	ENSOMEG00000001685	-	59	81.250	Oryzias_melastigma
ENSGMOG00000016584	rbm39b	61	87.500	ENSOGAG00000027149	-	61	87.500	Otolemur_garnettii
ENSGMOG00000016584	rbm39b	61	87.500	ENSOGAG00000011227	-	62	87.500	Otolemur_garnettii
ENSGMOG00000016584	rbm39b	61	87.500	ENSOARG00000014859	RBM39	62	87.500	Ovis_aries
ENSGMOG00000016584	rbm39b	61	87.500	ENSPPAG00000029710	-	62	87.500	Pan_paniscus
ENSGMOG00000016584	rbm39b	57	87.500	ENSPPAG00000041179	-	51	87.500	Pan_paniscus
ENSGMOG00000016584	rbm39b	61	87.500	ENSPPRG00000002157	RBM39	62	87.500	Panthera_pardus
ENSGMOG00000016584	rbm39b	61	87.500	ENSPTIG00000009580	RBM39	62	87.500	Panthera_tigris_altaica
ENSGMOG00000016584	rbm39b	61	84.375	ENSPTRG00000046501	-	59	84.375	Pan_troglodytes
ENSGMOG00000016584	rbm39b	61	87.500	ENSPTRG00000049720	-	62	87.500	Pan_troglodytes
ENSGMOG00000016584	rbm39b	61	87.500	ENSPANG00000021248	RBM39	61	87.500	Papio_anubis
ENSGMOG00000016584	rbm39b	61	90.625	ENSPKIG00000007461	-	61	90.625	Paramormyrops_kingsleyae
ENSGMOG00000016584	rbm39b	61	87.097	ENSPKIG00000017145	rbm39a	60	87.097	Paramormyrops_kingsleyae
ENSGMOG00000016584	rbm39b	61	87.500	ENSPSIG00000017885	RBM39	62	87.500	Pelodiscus_sinensis
ENSGMOG00000016584	rbm39b	61	87.500	ENSPEMG00000021887	Rbm39	62	87.500	Peromyscus_maniculatus_bairdii
ENSGMOG00000016584	rbm39b	61	87.500	ENSPCIG00000027946	RBM39	63	87.500	Phascolarctos_cinereus
ENSGMOG00000016584	rbm39b	61	87.500	ENSPFOG00000013197	rbm39b	62	87.500	Poecilia_formosa
ENSGMOG00000016584	rbm39b	61	81.250	ENSPFOG00000012350	-	61	81.250	Poecilia_formosa
ENSGMOG00000016584	rbm39b	61	87.500	ENSPLAG00000017500	rbm39b	62	87.500	Poecilia_latipinna
ENSGMOG00000016584	rbm39b	61	87.500	ENSPMEG00000007689	rbm39b	62	87.500	Poecilia_mexicana
ENSGMOG00000016584	rbm39b	61	81.250	ENSPMEG00000002750	-	62	81.250	Poecilia_mexicana
ENSGMOG00000016584	rbm39b	61	87.500	ENSPREG00000015150	rbm39b	62	87.500	Poecilia_reticulata
ENSGMOG00000016584	rbm39b	61	81.250	ENSPREG00000021088	-	50	90.909	Poecilia_reticulata
ENSGMOG00000016584	rbm39b	61	87.500	ENSPPYG00000010963	RBM39	62	87.500	Pongo_abelii
ENSGMOG00000016584	rbm39b	57	87.500	ENSPCAG00000008764	RBM39	56	87.500	Procavia_capensis
ENSGMOG00000016584	rbm39b	61	87.500	ENSPCOG00000027976	-	62	87.500	Propithecus_coquereli
ENSGMOG00000016584	rbm39b	61	87.500	ENSPVAG00000014944	RBM39	61	87.500	Pteropus_vampyrus
ENSGMOG00000016584	rbm39b	61	87.500	ENSPNYG00000004315	rbm39b	60	87.500	Pundamilia_nyererei
ENSGMOG00000016584	rbm39b	61	84.375	ENSPNAG00000007787	rbm39b	62	84.375	Pygocentrus_nattereri
ENSGMOG00000016584	rbm39b	61	87.500	ENSRNOG00000019848	Rbm39	63	87.500	Rattus_norvegicus
ENSGMOG00000016584	rbm39b	61	87.500	ENSRNOG00000049814	LOC100910882	63	87.500	Rattus_norvegicus
ENSGMOG00000016584	rbm39b	61	84.375	ENSRBIG00000013669	-	63	84.375	Rhinopithecus_bieti
ENSGMOG00000016584	rbm39b	61	87.500	ENSRBIG00000044413	-	62	87.500	Rhinopithecus_bieti
ENSGMOG00000016584	rbm39b	61	87.500	ENSRROG00000037484	RBM39	63	87.500	Rhinopithecus_roxellana
ENSGMOG00000016584	rbm39b	61	75.000	ENSSBOG00000031847	-	63	75.000	Saimiri_boliviensis_boliviensis
ENSGMOG00000016584	rbm39b	61	87.500	ENSSBOG00000025642	-	66	87.500	Saimiri_boliviensis_boliviensis
ENSGMOG00000016584	rbm39b	61	87.500	ENSSHAG00000018608	RBM39	63	87.500	Sarcophilus_harrisii
ENSGMOG00000016584	rbm39b	61	87.500	ENSSFOG00015017280	-	60	87.500	Scleropages_formosus
ENSGMOG00000016584	rbm39b	61	90.323	ENSSFOG00015003597	rbm39	60	90.323	Scleropages_formosus
ENSGMOG00000016584	rbm39b	61	90.625	ENSSMAG00000010777	rbm39b	63	90.625	Scophthalmus_maximus
ENSGMOG00000016584	rbm39b	61	77.419	ENSSMAG00000006440	-	62	77.419	Scophthalmus_maximus
ENSGMOG00000016584	rbm39b	61	87.500	ENSSDUG00000014712	rbm39b	61	87.500	Seriola_dumerili
ENSGMOG00000016584	rbm39b	61	78.788	ENSSDUG00000018191	-	55	78.788	Seriola_dumerili
ENSGMOG00000016584	rbm39b	61	81.818	ENSSLDG00000022188	-	57	81.818	Seriola_lalandi_dorsalis
ENSGMOG00000016584	rbm39b	61	87.500	ENSSLDG00000006938	rbm39b	61	87.500	Seriola_lalandi_dorsalis
ENSGMOG00000016584	rbm39b	61	87.500	ENSSPAG00000017157	rbm39b	61	87.500	Stegastes_partitus
ENSGMOG00000016584	rbm39b	61	87.500	ENSSSCG00000007309	RBM39	64	87.500	Sus_scrofa
ENSGMOG00000016584	rbm39b	61	84.375	ENSTGUG00000003048	RBM39	62	84.375	Taeniopygia_guttata
ENSGMOG00000016584	rbm39b	61	87.500	ENSTRUG00000011352	rbm39b	62	87.500	Takifugu_rubripes
ENSGMOG00000016584	rbm39b	61	75.000	ENSTNIG00000005223	-	63	75.000	Tetraodon_nigroviridis
ENSGMOG00000016584	rbm39b	61	87.500	ENSTTRG00000017039	RBM39	62	87.500	Tursiops_truncatus
ENSGMOG00000016584	rbm39b	61	87.500	ENSUAMG00000010443	RBM39	62	87.500	Ursus_americanus
ENSGMOG00000016584	rbm39b	61	87.500	ENSUMAG00000004302	RBM39	62	87.500	Ursus_maritimus
ENSGMOG00000016584	rbm39b	55	65.246	ENSVPAG00000003819	RBM39	60	70.764	Vicugna_pacos
ENSGMOG00000016584	rbm39b	61	87.500	ENSVVUG00000001290	RBM39	62	87.500	Vulpes_vulpes
ENSGMOG00000016584	rbm39b	61	87.500	ENSXCOG00000005456	rbm39b	61	87.500	Xiphophorus_couchianus
ENSGMOG00000016584	rbm39b	61	87.500	ENSXMAG00000017099	rbm39b	62	87.500	Xiphophorus_maculatus