EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSGMOG00000016608 (Gene tree)
Gene ID: -
Gene Symbol: rab18b
Alias: zgc:92523
Full Name: RAB18B%2C member RAS oncogene family
Gene Type: protein_coding
Species: Gadus_morhua
Status: putative
Strand: Minus strand
Length: 3908 bases
Position: chrGeneScaffold_3399:667-4574
Accession: ZDB-GENE-040801-185
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSGMOP00000017830	MMR_HSR1	PF01926.23	3e-06	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSGMOT00000018269	-	609	-	ENSGMOP00000017830	203 (aa)	-	UPI00023F39D0

Gene Model

Click here to download ENSGMOG00000016608's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSGMOG00000016608's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSGMOG00000016608	rab18b	93	43.878	ENSGMOG00000007293	rab1ba	95	43.878
ENSGMOG00000016608	rab18b	83	36.257	ENSGMOG00000004095	rab41	79	36.257
ENSGMOG00000016608	rab18b	79	41.420	ENSGMOG00000004096	-	76	41.420
ENSGMOG00000016608	rab18b	90	40.909	ENSGMOG00000004979	-	92	40.909
ENSGMOG00000016608	rab18b	56	39.474	ENSGMOG00000014481	rab36	60	39.474
ENSGMOG00000016608	rab18b	81	34.524	ENSGMOG00000012623	si:ch73-116o1.2	95	34.524
ENSGMOG00000016608	rab18b	79	42.331	ENSGMOG00000003610	rab15	76	42.331
ENSGMOG00000016608	rab18b	79	35.329	ENSGMOG00000007712	RAB7A	80	35.329
ENSGMOG00000016608	rab18b	77	42.138	ENSGMOG00000006444	rab25b	93	42.138
ENSGMOG00000016608	rab18b	83	38.150	ENSGMOG00000008450	-	80	38.150
ENSGMOG00000016608	rab18b	85	37.500	ENSGMOG00000010808	RAB39B	83	37.500
ENSGMOG00000016608	rab18b	81	31.737	ENSGMOG00000018928	rabl2	84	31.737
ENSGMOG00000016608	rab18b	57	44.828	ENSGMOG00000011665	zgc:101559	55	44.828
ENSGMOG00000016608	rab18b	78	43.210	ENSGMOG00000003577	-	81	43.210
ENSGMOG00000016608	rab18b	95	42.000	ENSGMOG00000010022	-	95	42.000
ENSGMOG00000016608	rab18b	86	36.571	ENSGMOG00000019073	-	76	36.571
ENSGMOG00000016608	rab18b	79	43.902	ENSGMOG00000008355	rab11a	75	43.902
ENSGMOG00000016608	rab18b	95	39.801	ENSGMOG00000015096	rab5c	91	40.299
ENSGMOG00000016608	rab18b	83	45.930	ENSGMOG00000017688	rab35b	100	41.872
ENSGMOG00000016608	rab18b	76	34.810	ENSGMOG00000018741	-	74	34.810
ENSGMOG00000016608	rab18b	93	43.590	ENSGMOG00000004888	rab1ab	98	44.103
ENSGMOG00000016608	rab18b	78	38.554	ENSGMOG00000000885	rab33ba	78	38.554
ENSGMOG00000016608	rab18b	70	43.836	ENSGMOG00000011766	-	93	43.836
ENSGMOG00000016608	rab18b	76	31.250	ENSGMOG00000017644	si:ch211-247i17.1	91	31.250
ENSGMOG00000016608	rab18b	85	30.726	ENSGMOG00000012401	rheb	93	30.726
ENSGMOG00000016608	rab18b	87	34.973	ENSGMOG00000020148	-	93	34.973
ENSGMOG00000016608	rab18b	93	34.010	ENSGMOG00000020144	rab9a	96	34.010
ENSGMOG00000016608	rab18b	82	41.420	ENSGMOG00000016277	RAB15	78	41.420
ENSGMOG00000016608	rab18b	88	31.868	ENSGMOG00000005102	rab23	77	31.868
ENSGMOG00000016608	rab18b	94	38.265	ENSGMOG00000013070	rab22a	98	38.265
ENSGMOG00000016608	rab18b	95	37.245	ENSGMOG00000002868	rab5aa	82	37.245
ENSGMOG00000016608	rab18b	57	36.975	ENSGMOG00000018475	RAB29	72	36.975
ENSGMOG00000016608	rab18b	79	36.585	ENSGMOG00000006968	-	78	36.585
ENSGMOG00000016608	rab18b	70	41.497	ENSGMOG00000006175	rab33a	63	41.497
ENSGMOG00000016608	rab18b	93	38.916	ENSGMOG00000000532	-	94	38.916
ENSGMOG00000016608	rab18b	81	31.928	ENSGMOG00000010196	hrasb	89	31.928
ENSGMOG00000016608	rab18b	90	39.583	ENSGMOG00000007390	rab11ba	87	39.583
ENSGMOG00000016608	rab18b	91	39.000	ENSGMOG00000006450	rab11al	99	39.000
ENSGMOG00000016608	rab18b	76	41.772	ENSGMOG00000007127	RAB5A	86	41.772
ENSGMOG00000016608	rab18b	79	44.512	ENSGMOG00000009211	rab11bb	75	44.512
ENSGMOG00000016608	rab18b	79	43.293	ENSGMOG00000009668	-	75	43.293
ENSGMOG00000016608	rab18b	75	43.871	ENSGMOG00000001876	-	89	43.871
ENSGMOG00000016608	rab18b	79	35.329	ENSGMOG00000020194	rab9b	82	35.329
ENSGMOG00000016608	rab18b	80	31.707	ENSGMOG00000010581	kras	85	31.707
ENSGMOG00000016608	rab18b	99	42.365	ENSGMOG00000002552	rab30	98	42.365
ENSGMOG00000016608	rab18b	92	37.563	ENSGMOG00000001834	rab4b	94	37.563
ENSGMOG00000016608	rab18b	79	35.329	ENSGMOG00000011308	-	81	35.329
ENSGMOG00000016608	rab18b	81	45.238	ENSGMOG00000012335	rab12	70	45.238

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSGMOG00000016608	rab18b	99	79.024	ENSG00000099246	RAB18	99	79.512	Homo_sapiens
ENSGMOG00000016608	rab18b	100	84.878	ENSAPOG00000019881	rab18b	100	84.878	Acanthochromis_polyacanthus
ENSGMOG00000016608	rab18b	99	68.936	ENSAMEG00000015990	RAB18	99	69.362	Ailuropoda_melanoleuca
ENSGMOG00000016608	rab18b	100	86.341	ENSACIG00000008102	rab18b	100	86.341	Amphilophus_citrinellus
ENSGMOG00000016608	rab18b	100	84.878	ENSAOCG00000013479	rab18b	100	84.878	Amphiprion_ocellaris
ENSGMOG00000016608	rab18b	100	84.390	ENSAPEG00000022923	rab18b	100	84.390	Amphiprion_percula
ENSGMOG00000016608	rab18b	100	82.439	ENSATEG00000002952	rab18b	100	82.439	Anabas_testudineus
ENSGMOG00000016608	rab18b	99	79.024	ENSANAG00000035856	RAB18	99	79.512	Aotus_nancymaae
ENSGMOG00000016608	rab18b	100	85.366	ENSACLG00000015289	rab18b	100	85.366	Astatotilapia_calliptera
ENSGMOG00000016608	rab18b	99	81.373	ENSAMXG00000042073	rab18b	99	81.373	Astyanax_mexicanus
ENSGMOG00000016608	rab18b	99	77.073	ENSBTAG00000050873	-	99	77.073	Bos_taurus
ENSGMOG00000016608	rab18b	99	79.024	ENSBTAG00000009871	RAB18	88	79.512	Bos_taurus
ENSGMOG00000016608	rab18b	99	79.024	ENSCJAG00000045749	RAB18	99	79.512	Callithrix_jacchus
ENSGMOG00000016608	rab18b	99	79.024	ENSCAFG00020003253	RAB18	99	79.512	Canis_lupus_dingo
ENSGMOG00000016608	rab18b	99	79.024	ENSCHIG00000008749	RAB18	99	79.512	Capra_hircus
ENSGMOG00000016608	rab18b	99	78.537	ENSTSYG00000013092	RAB18	99	79.024	Carlito_syrichta
ENSGMOG00000016608	rab18b	99	79.512	ENSCPOG00000032827	RAB18	99	79.512	Cavia_porcellus
ENSGMOG00000016608	rab18b	99	79.024	ENSCCAG00000006762	RAB18	99	79.512	Cebus_capucinus
ENSGMOG00000016608	rab18b	99	79.024	ENSCATG00000009672	RAB18	99	79.512	Cercocebus_atys
ENSGMOG00000016608	rab18b	99	79.024	ENSCSAG00000011749	RAB18	99	79.512	Chlorocebus_sabaeus
ENSGMOG00000016608	rab18b	99	79.024	ENSCANG00000035397	RAB18	99	79.512	Colobus_angolensis_palliatus
ENSGMOG00000016608	rab18b	99	79.512	ENSCGRG00001017519	Rab18	99	79.512	Cricetulus_griseus_chok1gshd
ENSGMOG00000016608	rab18b	99	79.512	ENSCGRG00000017201	Rab18	99	79.512	Cricetulus_griseus_crigri
ENSGMOG00000016608	rab18b	95	84.615	ENSCSEG00000016803	rab18b	99	84.615	Cynoglossus_semilaevis
ENSGMOG00000016608	rab18b	99	81.373	ENSDARG00000098344	rab18b	99	81.373	Danio_rerio
ENSGMOG00000016608	rab18b	56	85.841	ENSDNOG00000038845	-	75	85.841	Dasypus_novemcinctus
ENSGMOG00000016608	rab18b	99	79.024	ENSDNOG00000047713	RAB18	99	79.512	Dasypus_novemcinctus
ENSGMOG00000016608	rab18b	99	79.024	ENSDORG00000028596	-	99	79.024	Dipodomys_ordii
ENSGMOG00000016608	rab18b	85	77.586	ENSDORG00000029360	-	83	77.586	Dipodomys_ordii
ENSGMOG00000016608	rab18b	99	79.024	ENSEASG00005007164	RAB18	99	79.512	Equus_asinus_asinus
ENSGMOG00000016608	rab18b	99	79.024	ENSECAG00000017521	RAB18	88	79.512	Equus_caballus
ENSGMOG00000016608	rab18b	100	80.097	ENSELUG00000016450	rab18b	100	80.097	Esox_lucius
ENSGMOG00000016608	rab18b	99	79.024	ENSFCAG00000027161	RAB18	99	79.512	Felis_catus
ENSGMOG00000016608	rab18b	93	80.105	ENSFALG00000007160	RAB18	99	78.641	Ficedula_albicollis
ENSGMOG00000016608	rab18b	100	82.927	ENSFHEG00000020035	rab18b	100	82.927	Fundulus_heteroclitus
ENSGMOG00000016608	rab18b	99	79.024	ENSGALG00000007435	RAB18	99	79.512	Gallus_gallus
ENSGMOG00000016608	rab18b	100	83.415	ENSGAFG00000008560	rab18b	100	83.415	Gambusia_affinis
ENSGMOG00000016608	rab18b	100	81.463	ENSGACG00000016395	rab18b	100	81.463	Gasterosteus_aculeatus
ENSGMOG00000016608	rab18b	99	79.024	ENSGGOG00000008086	RAB18	99	79.512	Gorilla_gorilla
ENSGMOG00000016608	rab18b	100	85.366	ENSHBUG00000003696	rab18b	100	85.366	Haplochromis_burtoni
ENSGMOG00000016608	rab18b	99	79.512	ENSHGLG00000004365	RAB18	99	79.512	Heterocephalus_glaber_female
ENSGMOG00000016608	rab18b	99	66.176	ENSHGLG00000007301	-	95	66.176	Heterocephalus_glaber_female
ENSGMOG00000016608	rab18b	99	79.512	ENSHGLG00100013089	-	99	79.512	Heterocephalus_glaber_male
ENSGMOG00000016608	rab18b	99	66.176	ENSHGLG00100009117	-	95	66.176	Heterocephalus_glaber_male
ENSGMOG00000016608	rab18b	100	83.415	ENSHCOG00000002217	rab18b	100	83.415	Hippocampus_comes
ENSGMOG00000016608	rab18b	99	78.431	ENSIPUG00000010859	rab18b	99	78.431	Ictalurus_punctatus
ENSGMOG00000016608	rab18b	99	79.512	ENSSTOG00000014560	-	99	79.512	Ictidomys_tridecemlineatus
ENSGMOG00000016608	rab18b	100	82.927	ENSKMAG00000007364	rab18b	100	82.927	Kryptolebias_marmoratus
ENSGMOG00000016608	rab18b	100	85.366	ENSLBEG00000019428	rab18b	100	85.366	Labrus_bergylta
ENSGMOG00000016608	rab18b	99	69.608	ENSLACG00000011256	rab18b	99	69.608	Latimeria_chalumnae
ENSGMOG00000016608	rab18b	93	80.628	ENSLAFG00000015582	RAB18	99	79.512	Loxodonta_africana
ENSGMOG00000016608	rab18b	99	79.024	ENSMFAG00000006430	RAB18	99	79.512	Macaca_fascicularis
ENSGMOG00000016608	rab18b	98	79.104	ENSMMUG00000046971	RAB18	73	79.104	Macaca_mulatta
ENSGMOG00000016608	rab18b	99	79.024	ENSMNEG00000038180	RAB18	99	79.512	Macaca_nemestrina
ENSGMOG00000016608	rab18b	99	79.024	ENSMLEG00000033595	RAB18	99	79.512	Mandrillus_leucophaeus
ENSGMOG00000016608	rab18b	99	81.863	ENSMAMG00000018445	rab18b	99	81.863	Mastacembelus_armatus
ENSGMOG00000016608	rab18b	100	85.366	ENSMZEG00005008244	rab18b	100	85.366	Maylandia_zebra
ENSGMOG00000016608	rab18b	99	70.098	ENSMAUG00000020698	-	99	70.098	Mesocricetus_auratus
ENSGMOG00000016608	rab18b	93	80.628	ENSMICG00000017280	RAB18	99	79.512	Microcebus_murinus
ENSGMOG00000016608	rab18b	99	79.512	ENSMOCG00000013044	Rab18	99	79.512	Microtus_ochrogaster
ENSGMOG00000016608	rab18b	100	74.194	ENSMMOG00000017849	rab18b	100	71.429	Mola_mola
ENSGMOG00000016608	rab18b	99	72.059	ENSMODG00000024936	-	99	72.059	Monodelphis_domestica
ENSGMOG00000016608	rab18b	99	79.902	ENSMODG00000008253	RAB18	99	79.902	Monodelphis_domestica
ENSGMOG00000016608	rab18b	99	82.353	ENSMALG00000005069	rab18b	99	82.353	Monopterus_albus
ENSGMOG00000016608	rab18b	99	79.512	MGP_CAROLIEiJ_G0021978	Rab18	99	79.512	Mus_caroli
ENSGMOG00000016608	rab18b	99	79.512	ENSMUSG00000073639	Rab18	99	79.512	Mus_musculus
ENSGMOG00000016608	rab18b	99	79.512	MGP_PahariEiJ_G0018716	Rab18	99	79.512	Mus_pahari
ENSGMOG00000016608	rab18b	99	79.512	MGP_SPRETEiJ_G0022894	Rab18	99	79.512	Mus_spretus
ENSGMOG00000016608	rab18b	99	79.024	ENSMPUG00000010592	RAB18	99	79.512	Mustela_putorius_furo
ENSGMOG00000016608	rab18b	99	68.936	ENSMLUG00000027295	RAB18	99	69.362	Myotis_lucifugus
ENSGMOG00000016608	rab18b	99	79.512	ENSNGAG00000001465	Rab18	99	79.512	Nannospalax_galili
ENSGMOG00000016608	rab18b	100	85.366	ENSNBRG00000008137	rab18b	100	85.366	Neolamprologus_brichardi
ENSGMOG00000016608	rab18b	99	79.024	ENSNLEG00000016970	RAB18	99	79.512	Nomascus_leucogenys
ENSGMOG00000016608	rab18b	99	79.512	ENSODEG00000004150	-	99	79.512	Octodon_degus
ENSGMOG00000016608	rab18b	100	85.366	ENSONIG00000018673	rab18b	100	85.366	Oreochromis_niloticus
ENSGMOG00000016608	rab18b	91	82.353	ENSOANG00000021391	RAB18	99	79.512	Ornithorhynchus_anatinus
ENSGMOG00000016608	rab18b	99	78.049	ENSOCUG00000022307	RAB18	99	78.049	Oryctolagus_cuniculus
ENSGMOG00000016608	rab18b	100	81.951	ENSORLG00000009609	rab18b	100	81.951	Oryzias_latipes
ENSGMOG00000016608	rab18b	100	81.951	ENSORLG00020011590	rab18b	100	81.951	Oryzias_latipes_hni
ENSGMOG00000016608	rab18b	100	81.951	ENSORLG00015007182	rab18b	100	81.951	Oryzias_latipes_hsok
ENSGMOG00000016608	rab18b	100	82.439	ENSOMEG00000007546	rab18b	100	82.439	Oryzias_melastigma
ENSGMOG00000016608	rab18b	93	80.628	ENSOGAG00000028015	RAB18	99	79.512	Otolemur_garnettii
ENSGMOG00000016608	rab18b	99	79.024	ENSOARG00000016208	RAB18	99	79.512	Ovis_aries
ENSGMOG00000016608	rab18b	99	79.024	ENSPPAG00000041625	RAB18	99	79.512	Pan_paniscus
ENSGMOG00000016608	rab18b	99	79.024	ENSPPRG00000010314	RAB18	99	79.512	Panthera_pardus
ENSGMOG00000016608	rab18b	99	79.024	ENSPTIG00000011667	RAB18	99	79.512	Panthera_tigris_altaica
ENSGMOG00000016608	rab18b	99	79.024	ENSPTRG00000002384	RAB18	99	79.512	Pan_troglodytes
ENSGMOG00000016608	rab18b	99	79.024	ENSPANG00000023005	RAB18	99	79.512	Papio_anubis
ENSGMOG00000016608	rab18b	98	79.512	ENSPMAG00000005322	rab18b	99	79.512	Petromyzon_marinus
ENSGMOG00000016608	rab18b	99	80.392	ENSPCIG00000028705	-	88	80.392	Phascolarctos_cinereus
ENSGMOG00000016608	rab18b	100	83.902	ENSPFOG00000013491	rab18b	100	83.902	Poecilia_formosa
ENSGMOG00000016608	rab18b	100	83.902	ENSPLAG00000019136	rab18b	100	83.902	Poecilia_latipinna
ENSGMOG00000016608	rab18b	100	83.902	ENSPMEG00000008223	rab18b	100	83.902	Poecilia_mexicana
ENSGMOG00000016608	rab18b	99	79.024	ENSPPYG00000002172	RAB18	99	79.512	Pongo_abelii
ENSGMOG00000016608	rab18b	93	80.628	ENSPCOG00000018906	RAB18	99	79.512	Propithecus_coquereli
ENSGMOG00000016608	rab18b	100	85.366	ENSPNYG00000001751	rab18b	100	85.366	Pundamilia_nyererei
ENSGMOG00000016608	rab18b	99	80.392	ENSPNAG00000002404	rab18b	99	80.392	Pygocentrus_nattereri
ENSGMOG00000016608	rab18b	99	79.512	ENSRNOG00000018972	Rab18	99	79.512	Rattus_norvegicus
ENSGMOG00000016608	rab18b	99	78.537	ENSRBIG00000035948	RAB18	99	79.024	Rhinopithecus_bieti
ENSGMOG00000016608	rab18b	99	79.024	ENSRROG00000040563	RAB18	99	79.512	Rhinopithecus_roxellana
ENSGMOG00000016608	rab18b	99	80.392	ENSSHAG00000007613	RAB18	99	80.392	Sarcophilus_harrisii
ENSGMOG00000016608	rab18b	100	84.390	ENSSMAG00000011814	rab18b	100	84.390	Scophthalmus_maximus
ENSGMOG00000016608	rab18b	100	85.366	ENSSDUG00000005960	rab18b	100	85.366	Seriola_dumerili
ENSGMOG00000016608	rab18b	100	85.366	ENSSLDG00000006014	rab18b	100	85.366	Seriola_lalandi_dorsalis
ENSGMOG00000016608	rab18b	100	84.390	ENSSPAG00000020875	rab18b	100	84.390	Stegastes_partitus
ENSGMOG00000016608	rab18b	99	79.024	ENSSSCG00000028655	RAB18	99	79.512	Sus_scrofa
ENSGMOG00000016608	rab18b	93	70.183	ENSTGUG00000001105	-	99	69.528	Taeniopygia_guttata
ENSGMOG00000016608	rab18b	100	82.927	ENSTRUG00000004283	rab18b	100	82.927	Takifugu_rubripes
ENSGMOG00000016608	rab18b	100	82.524	ENSTNIG00000007882	rab18b	100	82.524	Tetraodon_nigroviridis
ENSGMOG00000016608	rab18b	99	79.024	ENSVVUG00000001705	RAB18	99	79.512	Vulpes_vulpes
ENSGMOG00000016608	rab18b	100	83.415	ENSXMAG00000006945	rab18b	100	83.415	Xiphophorus_maculatus