EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSGMOG00000016655 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: HSRNASEB|RNPC1|SEB4D|dJ800J21.2|seb4B
Full Name: -
Gene Type: protein_coding
Species: Gadus_morhua
Status: putative
Strand: Minus strand
Length: 4372 bases
Position: chrGeneScaffold_2467:34-4405
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSGMOP00000017876	RRM_1	PF00076.22	1.2e-16	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSGMOT00000018315	-	558	-	ENSGMOP00000017876	186 (aa)	-	UPI00023F3A95

Gene Model

Click here to download ENSGMOG00000016655's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSGMOG00000016655's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSGMOG00000016655	-	96	68.254	ENSGMOG00000007015	rbm24b	84	65.079
ENSGMOG00000016655	-	70	79.389	ENSGMOG00000010412	rbm24a	60	79.389
ENSGMOG00000016655	-	62	52.586	ENSGMOG00000016348	-	100	52.586

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSGMOG00000016655	-	96	74.725	ENSG00000132819	RBM38	94	86.325	Homo_sapiens
ENSGMOG00000016655	-	100	72.775	ENSAPOG00000003301	rbm38	76	70.157	Acanthochromis_polyacanthus
ENSGMOG00000016655	-	99	85.405	ENSAPOG00000009939	-	83	87.568	Acanthochromis_polyacanthus
ENSGMOG00000016655	-	99	71.053	ENSACIG00000000010	rbm38	75	68.063	Amphilophus_citrinellus
ENSGMOG00000016655	-	98	85.870	ENSACIG00000012502	-	100	94.872	Amphilophus_citrinellus
ENSGMOG00000016655	-	99	85.946	ENSAOCG00000012559	RBM38	80	88.108	Amphiprion_ocellaris
ENSGMOG00000016655	-	100	73.298	ENSAOCG00000013497	-	76	70.157	Amphiprion_ocellaris
ENSGMOG00000016655	-	99	85.946	ENSAPEG00000023581	-	75	88.108	Amphiprion_percula
ENSGMOG00000016655	-	100	73.298	ENSAPEG00000013137	rbm38	81	70.681	Amphiprion_percula
ENSGMOG00000016655	-	99	85.405	ENSATEG00000016710	-	75	87.027	Anabas_testudineus
ENSGMOG00000016655	-	99	72.632	ENSATEG00000016366	rbm38	75	74.011	Anabas_testudineus
ENSGMOG00000016655	-	98	74.595	ENSACAG00000016238	RBM38	75	71.196	Anolis_carolinensis
ENSGMOG00000016655	-	96	75.275	ENSANAG00000031959	RBM38	78	93.617	Aotus_nancymaae
ENSGMOG00000016655	-	98	85.326	ENSACLG00000019514	-	75	87.500	Astatotilapia_calliptera
ENSGMOG00000016655	-	95	72.727	ENSAMXG00000038120	rbm38	73	72.159	Astyanax_mexicanus
ENSGMOG00000016655	-	98	85.326	ENSAMXG00000015601	-	76	80.435	Astyanax_mexicanus
ENSGMOG00000016655	-	96	73.626	ENSBTAG00000008105	RBM38	75	70.718	Bos_taurus
ENSGMOG00000016655	-	73	65.185	WBGene00006321	sup-12	77	66.929	Caenorhabditis_elegans
ENSGMOG00000016655	-	96	76.374	ENSCJAG00000019139	RBM38	78	93.617	Callithrix_jacchus
ENSGMOG00000016655	-	96	75.275	ENSCAFG00020021943	RBM38	75	73.626	Canis_lupus_dingo
ENSGMOG00000016655	-	96	73.077	ENSCHIG00000002609	RBM38	75	70.166	Capra_hircus
ENSGMOG00000016655	-	96	74.176	ENSCPOG00000012781	RBM38	75	70.718	Cavia_porcellus
ENSGMOG00000016655	-	96	76.374	ENSCCAG00000036872	RBM38	78	93.617	Cebus_capucinus
ENSGMOG00000016655	-	96	74.725	ENSCATG00000032133	RBM38	78	93.617	Cercocebus_atys
ENSGMOG00000016655	-	96	73.626	ENSCLAG00000005906	RBM38	78	70.718	Chinchilla_lanigera
ENSGMOG00000016655	-	96	74.725	ENSCSAG00000015503	RBM38	76	71.271	Chlorocebus_sabaeus
ENSGMOG00000016655	-	98	75.135	ENSCPBG00000024059	RBM38	84	70.652	Chrysemys_picta_bellii
ENSGMOG00000016655	-	96	55.801	ENSCANG00000030105	-	64	55.249	Colobus_angolensis_palliatus
ENSGMOG00000016655	-	96	73.626	ENSCGRG00001012928	Rbm38	76	70.718	Cricetulus_griseus_chok1gshd
ENSGMOG00000016655	-	82	73.377	ENSCSEG00000020943	rbm38	62	64.021	Cynoglossus_semilaevis
ENSGMOG00000016655	-	98	81.522	ENSCSEG00000004701	-	78	84.916	Cynoglossus_semilaevis
ENSGMOG00000016655	-	97	71.038	ENSCVAG00000015952	rbm38	72	68.306	Cyprinodon_variegatus
ENSGMOG00000016655	-	96	87.151	ENSCVAG00000005472	-	73	87.151	Cyprinodon_variegatus
ENSGMOG00000016655	-	100	77.419	ENSDARG00000058818	rbm38	77	75.806	Danio_rerio
ENSGMOG00000016655	-	96	74.444	ENSDNOG00000032004	RBM38	85	70.391	Dasypus_novemcinctus
ENSGMOG00000016655	-	53	83.838	ENSEBUG00000015164	rbm38	60	83.838	Eptatretus_burgeri
ENSGMOG00000016655	-	96	74.725	ENSECAG00000007700	RBM38	75	71.271	Equus_caballus
ENSGMOG00000016655	-	96	72.678	ENSEEUG00000013489	RBM38	76	70.330	Erinaceus_europaeus
ENSGMOG00000016655	-	97	85.484	ENSELUG00000005849	-	75	82.796	Esox_lucius
ENSGMOG00000016655	-	100	74.074	ENSELUG00000000585	-	81	73.016	Esox_lucius
ENSGMOG00000016655	-	96	75.275	ENSFCAG00000042916	RBM38	78	92.553	Felis_catus
ENSGMOG00000016655	-	94	73.295	ENSFALG00000010805	RBM38	90	70.857	Ficedula_albicollis
ENSGMOG00000016655	-	96	87.151	ENSFHEG00000006160	-	79	87.151	Fundulus_heteroclitus
ENSGMOG00000016655	-	100	68.586	ENSFHEG00000017748	rbm38	75	65.445	Fundulus_heteroclitus
ENSGMOG00000016655	-	98	74.054	ENSGALG00000026081	RBM38	84	69.565	Gallus_gallus
ENSGMOG00000016655	-	98	76.087	ENSGACG00000015224	rbm38	87	71.196	Gasterosteus_aculeatus
ENSGMOG00000016655	-	99	82.162	ENSGACG00000009873	-	84	84.865	Gasterosteus_aculeatus
ENSGMOG00000016655	-	98	74.595	ENSGAGG00000001187	RBM38	84	70.652	Gopherus_agassizii
ENSGMOG00000016655	-	98	85.326	ENSHBUG00000011778	-	79	86.957	Haplochromis_burtoni
ENSGMOG00000016655	-	99	70.526	ENSHBUG00000012058	rbm38	73	71.023	Haplochromis_burtoni
ENSGMOG00000016655	-	87	75.460	ENSHGLG00000015077	RBM38	75	70.718	Heterocephalus_glaber_female
ENSGMOG00000016655	-	97	58.889	ENSHCOG00000019040	rbm38	70	58.889	Hippocampus_comes
ENSGMOG00000016655	-	99	84.865	ENSHCOG00000005622	-	53	84.324	Hippocampus_comes
ENSGMOG00000016655	-	98	80.435	ENSIPUG00000019349	-	75	77.174	Ictalurus_punctatus
ENSGMOG00000016655	-	96	62.234	ENSKMAG00000012402	rbm38	80	58.201	Kryptolebias_marmoratus
ENSGMOG00000016655	-	99	85.946	ENSLBEG00000016163	RBM38	79	88.108	Labrus_bergylta
ENSGMOG00000016655	-	100	71.728	ENSLBEG00000018878	rbm38	75	69.110	Labrus_bergylta
ENSGMOG00000016655	-	99	83.243	ENSLOCG00000003456	rbm38	78	80.000	Lepisosteus_oculatus
ENSGMOG00000016655	-	96	74.725	ENSMFAG00000043808	RBM38	78	93.617	Macaca_fascicularis
ENSGMOG00000016655	-	96	74.725	ENSMMUG00000031391	RBM38	78	93.617	Macaca_mulatta
ENSGMOG00000016655	-	96	74.725	ENSMNEG00000034683	RBM38	78	93.617	Macaca_nemestrina
ENSGMOG00000016655	-	58	73.148	ENSMLEG00000043261	-	87	73.148	Mandrillus_leucophaeus
ENSGMOG00000016655	-	100	73.822	ENSMAMG00000024135	rbm38	75	71.728	Mastacembelus_armatus
ENSGMOG00000016655	-	99	85.946	ENSMAMG00000020499	RBM38	75	87.568	Mastacembelus_armatus
ENSGMOG00000016655	-	99	70.526	ENSMZEG00005026036	rbm38	75	67.539	Maylandia_zebra
ENSGMOG00000016655	-	98	85.326	ENSMZEG00005000849	-	79	86.957	Maylandia_zebra
ENSGMOG00000016655	-	96	74.725	ENSMAUG00000021211	Rbm38	76	70.718	Mesocricetus_auratus
ENSGMOG00000016655	-	96	75.824	ENSMICG00000038011	RBM38	83	71.823	Microcebus_murinus
ENSGMOG00000016655	-	96	74.176	ENSMOCG00000008715	Rbm38	76	70.166	Microtus_ochrogaster
ENSGMOG00000016655	-	99	85.405	ENSMMOG00000020051	-	81	87.027	Mola_mola
ENSGMOG00000016655	-	98	74.054	ENSMODG00000016458	RBM38	77	70.109	Monodelphis_domestica
ENSGMOG00000016655	-	83	75.796	ENSMALG00000022327	rbm38	66	76.129	Monopterus_albus
ENSGMOG00000016655	-	98	88.043	ENSMALG00000004680	RBM38	69	88.043	Monopterus_albus
ENSGMOG00000016655	-	87	75.460	MGP_CAROLIEiJ_G0024745	Rbm38	58	93.333	Mus_caroli
ENSGMOG00000016655	-	87	75.460	ENSMUSG00000027510	Rbm38	58	93.333	Mus_musculus
ENSGMOG00000016655	-	96	71.271	MGP_PahariEiJ_G0026186	Rbm38	58	93.333	Mus_pahari
ENSGMOG00000016655	-	96	71.271	MGP_SPRETEiJ_G0025665	Rbm38	58	93.333	Mus_spretus
ENSGMOG00000016655	-	96	75.275	ENSMPUG00000006518	RBM38	89	74.176	Mustela_putorius_furo
ENSGMOG00000016655	-	96	73.626	ENSMLUG00000011140	RBM38	83	70.166	Myotis_lucifugus
ENSGMOG00000016655	-	99	72.193	ENSNBRG00000022685	rbm38	77	69.519	Neolamprologus_brichardi
ENSGMOG00000016655	-	98	85.326	ENSNBRG00000022545	-	75	87.500	Neolamprologus_brichardi
ENSGMOG00000016655	-	62	77.586	ENSMEUG00000005475	-	86	77.586	Notamacropus_eugenii
ENSGMOG00000016655	-	96	74.176	ENSODEG00000007980	RBM38	75	70.718	Octodon_degus
ENSGMOG00000016655	-	99	71.053	ENSONIG00000017073	rbm38	77	68.063	Oreochromis_niloticus
ENSGMOG00000016655	-	98	85.326	ENSONIG00000020324	-	75	87.500	Oreochromis_niloticus
ENSGMOG00000016655	-	96	74.444	ENSOANG00000009259	RBM38	69	70.787	Ornithorhynchus_anatinus
ENSGMOG00000016655	-	97	67.213	ENSORLG00000012154	rbm38	75	63.351	Oryzias_latipes
ENSGMOG00000016655	-	98	83.152	ENSORLG00000027180	-	74	84.324	Oryzias_latipes
ENSGMOG00000016655	-	98	83.152	ENSORLG00020020751	-	74	84.324	Oryzias_latipes_hni
ENSGMOG00000016655	-	100	66.492	ENSORLG00020017871	rbm38	75	63.874	Oryzias_latipes_hni
ENSGMOG00000016655	-	99	83.243	ENSORLG00015017040	-	75	84.865	Oryzias_latipes_hsok
ENSGMOG00000016655	-	100	66.492	ENSORLG00015012606	rbm38	77	63.243	Oryzias_latipes_hsok
ENSGMOG00000016655	-	100	67.539	ENSOMEG00000006805	rbm38	75	64.921	Oryzias_melastigma
ENSGMOG00000016655	-	99	82.703	ENSOMEG00000023912	-	75	84.324	Oryzias_melastigma
ENSGMOG00000016655	-	96	75.824	ENSOGAG00000029136	RBM38	75	72.376	Otolemur_garnettii
ENSGMOG00000016655	-	96	75.275	ENSPPRG00000009507	RBM38	78	92.553	Panthera_pardus
ENSGMOG00000016655	-	96	74.725	ENSPTRG00000013661	RBM38	78	93.617	Pan_troglodytes
ENSGMOG00000016655	-	65	85.833	ENSPTRG00000045845	-	66	85.833	Pan_troglodytes
ENSGMOG00000016655	-	96	74.725	ENSPANG00000020919	-	78	93.617	Papio_anubis
ENSGMOG00000016655	-	96	60.440	ENSPANG00000033127	-	78	55.978	Papio_anubis
ENSGMOG00000016655	-	98	76.596	ENSPKIG00000025417	rbm38	77	75.263	Paramormyrops_kingsleyae
ENSGMOG00000016655	-	99	79.459	ENSPKIG00000018122	-	100	87.179	Paramormyrops_kingsleyae
ENSGMOG00000016655	-	98	74.054	ENSPSIG00000011649	RBM38	78	70.109	Pelodiscus_sinensis
ENSGMOG00000016655	-	100	71.204	ENSPMGG00000011343	rbm38	76	69.110	Periophthalmus_magnuspinnatus
ENSGMOG00000016655	-	97	78.689	ENSPMGG00000017094	-	73	80.874	Periophthalmus_magnuspinnatus
ENSGMOG00000016655	-	98	75.135	ENSPCIG00000013648	RBM38	77	71.739	Phascolarctos_cinereus
ENSGMOG00000016655	-	100	66.667	ENSPFOG00000011658	rbm38	76	66.146	Poecilia_formosa
ENSGMOG00000016655	-	96	87.151	ENSPLAG00000002500	-	72	85.475	Poecilia_latipinna
ENSGMOG00000016655	-	100	66.839	ENSPLAG00000005218	rbm38	76	65.625	Poecilia_latipinna
ENSGMOG00000016655	-	97	69.022	ENSPMEG00000015770	rbm38	76	66.146	Poecilia_mexicana
ENSGMOG00000016655	-	100	66.146	ENSPREG00000007398	rbm38	76	65.625	Poecilia_reticulata
ENSGMOG00000016655	-	96	74.725	ENSPCOG00000026201	RBM38	77	93.617	Propithecus_coquereli
ENSGMOG00000016655	-	96	46.703	ENSPVAG00000006457	RBM38	76	43.407	Pteropus_vampyrus
ENSGMOG00000016655	-	99	70.000	ENSPNYG00000021373	rbm38	74	70.225	Pundamilia_nyererei
ENSGMOG00000016655	-	98	85.326	ENSPNYG00000019727	-	100	94.872	Pundamilia_nyererei
ENSGMOG00000016655	-	99	76.216	ENSPNAG00000010596	rbm38	77	74.595	Pygocentrus_nattereri
ENSGMOG00000016655	-	98	80.435	ENSPNAG00000015123	-	99	80.882	Pygocentrus_nattereri
ENSGMOG00000016655	-	96	74.176	ENSRNOG00000006420	Rbm38	76	70.718	Rattus_norvegicus
ENSGMOG00000016655	-	96	59.890	ENSRROG00000036388	-	74	63.380	Rhinopithecus_roxellana
ENSGMOG00000016655	-	96	76.374	ENSSBOG00000031053	RBM38	88	93.617	Saimiri_boliviensis_boliviensis
ENSGMOG00000016655	-	99	75.936	ENSSFOG00015004453	rbm38	79	77.660	Scleropages_formosus
ENSGMOG00000016655	-	99	88.108	ENSSDUG00000021082	RBM38	75	88.108	Seriola_dumerili
ENSGMOG00000016655	-	100	74.346	ENSSDUG00000022611	rbm38	75	72.251	Seriola_dumerili
ENSGMOG00000016655	-	100	74.346	ENSSLDG00000010845	rbm38	82	72.251	Seriola_lalandi_dorsalis
ENSGMOG00000016655	-	99	88.108	ENSSLDG00000011778	RBM38	75	88.108	Seriola_lalandi_dorsalis
ENSGMOG00000016655	-	100	72.775	ENSSPAG00000011113	rbm38	75	69.634	Stegastes_partitus
ENSGMOG00000016655	-	99	85.405	ENSSPAG00000020989	RBM38	83	87.568	Stegastes_partitus
ENSGMOG00000016655	-	96	74.176	ENSSSCG00000007504	RBM38	75	70.718	Sus_scrofa
ENSGMOG00000016655	-	97	73.770	ENSTRUG00000024954	rbm38	76	69.474	Takifugu_rubripes
ENSGMOG00000016655	-	99	84.865	ENSTRUG00000019869	-	75	87.027	Takifugu_rubripes
ENSGMOG00000016655	-	99	85.405	ENSTNIG00000007093	-	83	87.568	Tetraodon_nigroviridis
ENSGMOG00000016655	-	96	75.275	ENSUAMG00000019780	RBM38	75	73.626	Ursus_americanus
ENSGMOG00000016655	-	96	75.275	ENSVVUG00000017246	RBM38	75	73.626	Vulpes_vulpes
ENSGMOG00000016655	-	98	71.892	ENSXETG00000011268	rbm38	82	70.109	Xenopus_tropicalis
ENSGMOG00000016655	-	71	83.212	ENSXCOG00000017324	-	59	83.824	Xiphophorus_couchianus
ENSGMOG00000016655	-	100	68.586	ENSXMAG00000023662	rbm38	75	65.445	Xiphophorus_maculatus