EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSGMOG00000016803 (Gene tree)
Gene ID: -
Gene Symbol: sb:cb81
Alias: LOC100334443|cb81
Full Name: sb:cb81
Gene Type: protein_coding
Species: Gadus_morhua
Status: putative
Strand: Plus strand
Length: 932 bases
Position: chrGeneScaffold_2706:76676-77607
Accession: ZDB-GENE-030131-9939
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSGMOP00000018051	zf-CCCH	PF00642.24	6.8e-23	1	2
ENSGMOP00000018051	zf-CCCH	PF00642.24	6.8e-23	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSGMOT00000018496	-	810	-	ENSGMOP00000018051	269 (aa)	-	UPI00023F37EF

Gene Model

Click here to download ENSGMOG00000016803's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSGMOG00000016803's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSGMOG00000016803	sb:cb81	90	42.803	ENSGMOG00000017242	zgc:162730	80	38.492

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSGMOG00000016803	sb:cb81	100	62.724	ENSAPOG00000011209	sb:cb81	68	56.489	Acanthochromis_polyacanthus
ENSGMOG00000016803	sb:cb81	91	62.500	ENSACIG00000009027	sb:cb81	62	62.121	Amphilophus_citrinellus
ENSGMOG00000016803	sb:cb81	78	39.013	ENSACIG00000017366	zgc:162730	96	33.333	Amphilophus_citrinellus
ENSGMOG00000016803	sb:cb81	100	62.724	ENSAOCG00000024158	sb:cb81	72	52.921	Amphiprion_ocellaris
ENSGMOG00000016803	sb:cb81	100	63.082	ENSAPEG00000022405	sb:cb81	72	52.921	Amphiprion_percula
ENSGMOG00000016803	sb:cb81	100	58.033	ENSATEG00000003462	sb:cb81	62	61.654	Anabas_testudineus
ENSGMOG00000016803	sb:cb81	90	61.686	ENSACLG00000013759	sb:cb81	62	60.985	Astatotilapia_calliptera
ENSGMOG00000016803	sb:cb81	72	45.238	ENSACLG00000022112	zgc:162730	67	37.589	Astatotilapia_calliptera
ENSGMOG00000016803	sb:cb81	91	54.054	ENSAMXG00000034874	sb:cb81	65	53.077	Astyanax_mexicanus
ENSGMOG00000016803	sb:cb81	92	42.322	ENSCSEG00000018283	zgc:162730	95	35.747	Cynoglossus_semilaevis
ENSGMOG00000016803	sb:cb81	91	58.672	ENSCSEG00000014426	sb:cb81	53	52.313	Cynoglossus_semilaevis
ENSGMOG00000016803	sb:cb81	90	60.687	ENSCVAG00000009207	sb:cb81	63	58.935	Cyprinodon_variegatus
ENSGMOG00000016803	sb:cb81	97	61.069	ENSDARG00000040503	sb:cb81	62	54.251	Danio_rerio
ENSGMOG00000016803	sb:cb81	90	44.531	ENSDARG00000103720	zgc:162730	72	40.154	Danio_rerio
ENSGMOG00000016803	sb:cb81	90	39.194	ENSELUG00000013158	zgc:162730	69	36.940	Esox_lucius
ENSGMOG00000016803	sb:cb81	91	58.238	ENSELUG00000013045	sb:cb81	63	51.163	Esox_lucius
ENSGMOG00000016803	sb:cb81	90	62.977	ENSFHEG00000022187	sb:cb81	62	62.264	Fundulus_heteroclitus
ENSGMOG00000016803	sb:cb81	91	62.400	ENSGAFG00000015700	sb:cb81	64	57.200	Gambusia_affinis
ENSGMOG00000016803	sb:cb81	100	60.959	ENSGACG00000013400	sb:cb81	79	63.019	Gasterosteus_aculeatus
ENSGMOG00000016803	sb:cb81	90	62.069	ENSHBUG00000002383	sb:cb81	62	61.364	Haplochromis_burtoni
ENSGMOG00000016803	sb:cb81	72	45.238	ENSHBUG00000015057	zgc:162730	67	37.589	Haplochromis_burtoni
ENSGMOG00000016803	sb:cb81	91	50.000	ENSHCOG00000000792	sb:cb81	65	46.732	Hippocampus_comes
ENSGMOG00000016803	sb:cb81	98	52.593	ENSIPUG00000011378	sb:cb81	62	53.600	Ictalurus_punctatus
ENSGMOG00000016803	sb:cb81	90	40.909	ENSIPUG00000018248	zgc:162730	71	36.940	Ictalurus_punctatus
ENSGMOG00000016803	sb:cb81	91	40.138	ENSKMAG00000019277	zgc:162730	66	35.069	Kryptolebias_marmoratus
ENSGMOG00000016803	sb:cb81	96	58.681	ENSKMAG00000009884	sb:cb81	62	53.069	Kryptolebias_marmoratus
ENSGMOG00000016803	sb:cb81	93	54.982	ENSLBEG00000018376	sb:cb81	60	52.060	Labrus_bergylta
ENSGMOG00000016803	sb:cb81	92	56.863	ENSLACG00000015732	sb:cb81	66	52.000	Latimeria_chalumnae
ENSGMOG00000016803	sb:cb81	90	43.985	ENSLOCG00000014597	zgc:162730	68	39.483	Lepisosteus_oculatus
ENSGMOG00000016803	sb:cb81	93	61.217	ENSLOCG00000014587	sb:cb81	62	54.826	Lepisosteus_oculatus
ENSGMOG00000016803	sb:cb81	90	61.852	ENSMAMG00000020144	sb:cb81	56	60.223	Mastacembelus_armatus
ENSGMOG00000016803	sb:cb81	90	62.835	ENSMZEG00005016001	-	62	56.818	Maylandia_zebra
ENSGMOG00000016803	sb:cb81	90	62.452	ENSMZEG00005024684	sb:cb81	62	56.439	Maylandia_zebra
ENSGMOG00000016803	sb:cb81	94	41.638	ENSMZEG00005014415	zgc:162730	96	43.396	Maylandia_zebra
ENSGMOG00000016803	sb:cb81	81	38.843	ENSMMOG00000011506	zgc:162730	99	33.613	Mola_mola
ENSGMOG00000016803	sb:cb81	91	63.424	ENSMMOG00000010073	sb:cb81	67	58.366	Mola_mola
ENSGMOG00000016803	sb:cb81	92	48.519	ENSMALG00000021140	-	99	44.074	Monopterus_albus
ENSGMOG00000016803	sb:cb81	90	63.218	ENSNBRG00000006231	sb:cb81	66	57.197	Neolamprologus_brichardi
ENSGMOG00000016803	sb:cb81	72	45.714	ENSNBRG00000013701	zgc:162730	67	37.943	Neolamprologus_brichardi
ENSGMOG00000016803	sb:cb81	90	41.985	ENSONIG00000005003	zgc:162730	81	38.491	Oreochromis_niloticus
ENSGMOG00000016803	sb:cb81	90	61.923	ENSONIG00000001259	sb:cb81	62	61.364	Oreochromis_niloticus
ENSGMOG00000016803	sb:cb81	92	62.082	ENSORLG00000024026	sb:cb81	56	56.554	Oryzias_latipes
ENSGMOG00000016803	sb:cb81	92	61.798	ENSORLG00020021084	sb:cb81	65	57.736	Oryzias_latipes_hni
ENSGMOG00000016803	sb:cb81	92	60.967	ENSORLG00015010105	sb:cb81	65	56.180	Oryzias_latipes_hsok
ENSGMOG00000016803	sb:cb81	93	60.821	ENSOMEG00000020565	sb:cb81	65	56.489	Oryzias_melastigma
ENSGMOG00000016803	sb:cb81	92	51.362	ENSPMGG00000009232	sb:cb81	80	43.874	Periophthalmus_magnuspinnatus
ENSGMOG00000016803	sb:cb81	92	43.511	ENSPFOG00000003665	zgc:162730	79	39.394	Poecilia_formosa
ENSGMOG00000016803	sb:cb81	90	64.113	ENSPFOG00000013806	sb:cb81	65	58.566	Poecilia_formosa
ENSGMOG00000016803	sb:cb81	94	62.934	ENSPLAG00000020158	sb:cb81	71	58.566	Poecilia_latipinna
ENSGMOG00000016803	sb:cb81	90	64.113	ENSPMEG00000022425	sb:cb81	65	58.566	Poecilia_mexicana
ENSGMOG00000016803	sb:cb81	90	64.257	ENSPREG00000017495	sb:cb81	64	60.317	Poecilia_reticulata
ENSGMOG00000016803	sb:cb81	90	62.069	ENSPNYG00000007502	sb:cb81	66	61.364	Pundamilia_nyererei
ENSGMOG00000016803	sb:cb81	72	45.238	ENSPNYG00000015553	zgc:162730	67	37.589	Pundamilia_nyererei
ENSGMOG00000016803	sb:cb81	92	61.719	ENSPNAG00000030063	sb:cb81	63	59.843	Pygocentrus_nattereri
ENSGMOG00000016803	sb:cb81	90	42.636	ENSPNAG00000023018	zgc:162730	70	38.783	Pygocentrus_nattereri
ENSGMOG00000016803	sb:cb81	78	55.556	ENSSMAG00000004403	sb:cb81	94	47.436	Scophthalmus_maximus
ENSGMOG00000016803	sb:cb81	91	63.569	ENSSDUG00000004426	sb:cb81	61	55.319	Seriola_dumerili
ENSGMOG00000016803	sb:cb81	93	41.155	ENSSDUG00000002247	zgc:162730	67	38.346	Seriola_dumerili
ENSGMOG00000016803	sb:cb81	93	41.516	ENSSLDG00000008502	zgc:162730	67	38.722	Seriola_lalandi_dorsalis
ENSGMOG00000016803	sb:cb81	91	63.569	ENSSLDG00000018035	sb:cb81	62	55.319	Seriola_lalandi_dorsalis
ENSGMOG00000016803	sb:cb81	90	64.368	ENSSPAG00000013546	sb:cb81	65	56.618	Stegastes_partitus
ENSGMOG00000016803	sb:cb81	91	63.462	ENSTRUG00000020720	sb:cb81	64	61.479	Takifugu_rubripes
ENSGMOG00000016803	sb:cb81	100	60.145	ENSTNIG00000019802	sb:cb81	77	53.788	Tetraodon_nigroviridis
ENSGMOG00000016803	sb:cb81	84	56.710	ENSXCOG00000010688	sb:cb81	86	51.515	Xiphophorus_couchianus
ENSGMOG00000016803	sb:cb81	91	62.151	ENSXMAG00000004681	sb:cb81	64	57.371	Xiphophorus_maculatus