EuRBPDB

Description

Ensembl ID: ENSGMOG00000016823 (Gene tree)
Gene ID: -
Gene Symbol: taf15
Alias: fa11g05|wu:fa11g05|wu:fc02g02|zgc:158363
Full Name: TAF15 RNA polymerase II%2C TATA box binding protein (TBP)-associated factor
Gene Type: protein_coding
Species: Gadus_morhua
Status: putative
Strand: Plus strand
Length: 5651 bases
Position: chrGeneScaffold_3153:131847-137497
Accession: ZDB-GENE-061215-102
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSGMOP00000018391	zf-RanBP	PF00641.18	4.4e-08	1	1
ENSGMOP00000018370	zf-RanBP	PF00641.18	5.7e-08	1	1
ENSGMOP00000018330	zf-RanBP	PF00641.18	6.2e-08	1	1
ENSGMOP00000018225	zf-RanBP	PF00641.18	7.1e-08	1	1
ENSGMOP00000018304	zf-RanBP	PF00641.18	7.1e-08	1	1
ENSGMOP00000018391	RRM_1	PF00076.22	4.3e-12	1	1
ENSGMOP00000018370	RRM_1	PF00076.22	7.2e-12	1	1
ENSGMOP00000018330	RRM_1	PF00076.22	1e-11	1	1
ENSGMOP00000018304	RRM_1	PF00076.22	1.1e-11	1	1
ENSGMOP00000018225	RRM_1	PF00076.22	1.1e-11	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSGMOT00000018673	-	1344	-	ENSGMOP00000018225	447 (aa)	-	UPI00023F383F
ENSGMOT00000018842	-	954	-	ENSGMOP00000018391	318 (aa)	-	UPI00023F3843
ENSGMOT00000018779	-	1335	-	ENSGMOP00000018330	444 (aa)	-	UPI00023F3841
ENSGMOT00000018820	-	1134	-	ENSGMOP00000018370	377 (aa)	-	UPI00023F3842
ENSGMOT00000018752	-	1347	-	ENSGMOP00000018304	448 (aa)	-	UPI00023F3840

Gene Model

Protein-Protein Interaction (PPI)

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSGMOG00000016823	taf15	62	71.574	ENSACIG00000008575	taf15	90	76.571	Amphilophus_citrinellus
ENSGMOG00000016823	taf15	59	76.190	ENSAOCG00000005912	taf15	53	75.661	Amphiprion_ocellaris
ENSGMOG00000016823	taf15	59	76.190	ENSAPEG00000018037	taf15	54	75.661	Amphiprion_percula
ENSGMOG00000016823	taf15	61	76.804	ENSATEG00000006084	taf15	76	77.835	Anabas_testudineus
ENSGMOG00000016823	taf15	63	74.510	ENSDARG00000070019	taf15	92	76.585	Danio_rerio
ENSGMOG00000016823	taf15	61	78.351	ENSGAFG00000007198	taf15	74	75.258	Gambusia_affinis
ENSGMOG00000016823	taf15	64	64.789	ENSORLG00000011382	taf15	67	69.231	Oryzias_latipes
ENSGMOG00000016823	taf15	61	77.320	ENSPFOG00000022773	taf15	88	58.028	Poecilia_formosa
ENSGMOG00000016823	taf15	61	76.804	ENSPLAG00000009579	taf15	88	57.666	Poecilia_latipinna
ENSGMOG00000016823	taf15	54	79.651	ENSPNYG00000012865	taf15	64	61.923	Pundamilia_nyererei
ENSGMOG00000016823	taf15	61	76.289	ENSSFOG00015004086	taf15	57	68.304	Scleropages_formosus
ENSGMOG00000016823	taf15	55	79.310	ENSXCOG00000012853	taf15	53	78.161	Xiphophorus_couchianus
ENSGMOG00000016823	taf15	61	77.835	ENSXMAG00000010983	taf15	74	74.742	Xiphophorus_maculatus