EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSGMOG00000016850 (Gene tree)
Gene ID: -
Gene Symbol: stau1
Alias: fi67e05|wu:fi67e05|zgc:77271
Full Name: staufen double-stranded RNA binding protein 1
Gene Type: protein_coding
Species: Gadus_morhua
Status: putative
Strand: Minus strand
Length: 6577 bases
Position: chrGeneScaffold_169:452304-458880
Accession: ZDB-GENE-030131-6372
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSGMOP00000018105	dsrm	PF00035.26	2.4e-38	1	4
ENSGMOP00000018105	dsrm	PF00035.26	2.4e-38	2	4
ENSGMOP00000018105	dsrm	PF00035.26	2.4e-38	3	4
ENSGMOP00000018105	dsrm	PF00035.26	2.4e-38	4	4

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSGMOT00000018552	-	2142	-	ENSGMOP00000018105	713 (aa)	-	UPI00023F38B0

Gene Model

Click here to download ENSGMOG00000016850's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSGMOG00000016850's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSGMOG00000016850	stau1	58	56.265	ENSGMOG00000005428	stau2	61	57.960

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSGMOG00000016850	stau1	77	61.733	ENSG00000124214	STAU1	100	63.208	Homo_sapiens
ENSGMOG00000016850	stau1	100	72.931	ENSAPOG00000017260	stau1	100	73.352	Acanthochromis_polyacanthus
ENSGMOG00000016850	stau1	100	60.221	ENSAMEG00000013681	STAU1	99	60.055	Ailuropoda_melanoleuca
ENSGMOG00000016850	stau1	100	70.547	ENSACIG00000015918	stau1	100	71.529	Amphilophus_citrinellus
ENSGMOG00000016850	stau1	100	74.334	ENSAOCG00000012224	stau1	100	74.334	Amphiprion_ocellaris
ENSGMOG00000016850	stau1	100	74.334	ENSAPEG00000012308	stau1	100	74.334	Amphiprion_percula
ENSGMOG00000016850	stau1	100	74.126	ENSATEG00000024600	stau1	100	75.109	Anabas_testudineus
ENSGMOG00000016850	stau1	100	62.993	ENSAPLG00000010527	STAU1	100	62.993	Anas_platyrhynchos
ENSGMOG00000016850	stau1	100	64.395	ENSACAG00000015909	STAU1	99	64.395	Anolis_carolinensis
ENSGMOG00000016850	stau1	77	62.162	ENSANAG00000032714	STAU1	85	70.833	Aotus_nancymaae
ENSGMOG00000016850	stau1	100	72.867	ENSACLG00000012270	stau1	100	72.867	Astatotilapia_calliptera
ENSGMOG00000016850	stau1	85	70.152	ENSAMXG00000016812	stau1	98	70.152	Astyanax_mexicanus
ENSGMOG00000016850	stau1	96	61.552	ENSBTAG00000000241	STAU1	89	62.547	Bos_taurus
ENSGMOG00000016850	stau1	96	61.552	ENSCJAG00000016233	STAU1	89	63.109	Callithrix_jacchus
ENSGMOG00000016850	stau1	96	63.089	ENSCAFG00000011347	STAU1	99	60.993	Canis_familiaris
ENSGMOG00000016850	stau1	96	61.277	ENSCAFG00020017123	STAU1	99	63.968	Canis_lupus_dingo
ENSGMOG00000016850	stau1	96	60.469	ENSCHIG00000001799	-	99	56.530	Capra_hircus
ENSGMOG00000016850	stau1	96	61.974	ENSTSYG00000036179	-	90	62.177	Carlito_syrichta
ENSGMOG00000016850	stau1	72	61.509	ENSCAPG00000017041	STAU1	99	61.509	Cavia_aperea
ENSGMOG00000016850	stau1	71	63.086	ENSCPOG00000005566	STAU1	99	63.086	Cavia_porcellus
ENSGMOG00000016850	stau1	77	62.162	ENSCCAG00000034339	STAU1	89	63.364	Cebus_capucinus
ENSGMOG00000016850	stau1	96	65.466	ENSCATG00000028474	STAU1	99	63.707	Cercocebus_atys
ENSGMOG00000016850	stau1	72	51.167	ENSCLAG00000002784	-	99	50.973	Chinchilla_lanigera
ENSGMOG00000016850	stau1	71	63.405	ENSCLAG00000006516	-	99	63.405	Chinchilla_lanigera
ENSGMOG00000016850	stau1	72	63.443	ENSCSAG00000014986	STAU1	99	63.443	Chlorocebus_sabaeus
ENSGMOG00000016850	stau1	96	62.162	ENSCHOG00000001511	STAU1	89	63.364	Choloepus_hoffmanni
ENSGMOG00000016850	stau1	100	64.206	ENSCPBG00000026741	STAU1	100	64.206	Chrysemys_picta_bellii
ENSGMOG00000016850	stau1	96	61.913	ENSCANG00000039220	STAU1	99	57.006	Colobus_angolensis_palliatus
ENSGMOG00000016850	stau1	71	60.078	ENSCGRG00001013453	Stau1	99	60.078	Cricetulus_griseus_chok1gshd
ENSGMOG00000016850	stau1	71	60.078	ENSCGRG00000007216	Stau1	99	60.078	Cricetulus_griseus_crigri
ENSGMOG00000016850	stau1	100	62.740	ENSCSEG00000000792	stau1	100	64.384	Cynoglossus_semilaevis
ENSGMOG00000016850	stau1	93	68.321	ENSCVAG00000005906	stau1	100	69.656	Cyprinodon_variegatus
ENSGMOG00000016850	stau1	100	69.748	ENSDARG00000044182	stau1	100	72.067	Danio_rerio
ENSGMOG00000016850	stau1	96	62.342	ENSDNOG00000014933	STAU1	87	63.925	Dasypus_novemcinctus
ENSGMOG00000016850	stau1	71	61.448	ENSDORG00000030220	Stau1	99	61.448	Dipodomys_ordii
ENSGMOG00000016850	stau1	67	62.418	ENSETEG00000018235	STAU1	76	62.418	Echinops_telfairi
ENSGMOG00000016850	stau1	96	60.759	ENSEASG00005023343	STAU1	96	64.492	Equus_asinus_asinus
ENSGMOG00000016850	stau1	96	62.158	ENSECAG00000012894	STAU1	99	62.158	Equus_caballus
ENSGMOG00000016850	stau1	56	65.509	ENSEEUG00000014344	STAU1	68	65.509	Erinaceus_europaeus
ENSGMOG00000016850	stau1	99	70.417	ENSELUG00000002529	stau1	99	71.516	Esox_lucius
ENSGMOG00000016850	stau1	96	63.842	ENSFCAG00000001447	STAU1	99	61.681	Felis_catus
ENSGMOG00000016850	stau1	100	63.649	ENSFALG00000012940	STAU1	100	63.649	Ficedula_albicollis
ENSGMOG00000016850	stau1	71	48.337	ENSFDAG00000020837	-	83	56.786	Fukomys_damarensis
ENSGMOG00000016850	stau1	71	62.818	ENSFDAG00000014119	-	99	62.818	Fukomys_damarensis
ENSGMOG00000016850	stau1	100	71.888	ENSFHEG00000013517	stau1	100	71.888	Fundulus_heteroclitus
ENSGMOG00000016850	stau1	100	64.206	ENSGALG00000004736	STAU1	100	64.206	Gallus_gallus
ENSGMOG00000016850	stau1	100	71.189	ENSGAFG00000010437	stau1	100	71.189	Gambusia_affinis
ENSGMOG00000016850	stau1	100	72.829	ENSGACG00000001352	stau1	100	72.829	Gasterosteus_aculeatus
ENSGMOG00000016850	stau1	100	63.877	ENSGAGG00000009825	STAU1	100	63.877	Gopherus_agassizii
ENSGMOG00000016850	stau1	96	58.169	ENSGGOG00000025351	STAU1	99	64.674	Gorilla_gorilla
ENSGMOG00000016850	stau1	100	73.007	ENSHBUG00000023668	stau1	100	73.007	Haplochromis_burtoni
ENSGMOG00000016850	stau1	71	62.941	ENSHGLG00000008730	STAU1	99	62.941	Heterocephalus_glaber_female
ENSGMOG00000016850	stau1	71	63.209	ENSHGLG00100000098	STAU1	99	63.209	Heterocephalus_glaber_male
ENSGMOG00000016850	stau1	100	66.899	ENSHCOG00000018461	stau1	100	67.318	Hippocampus_comes
ENSGMOG00000016850	stau1	100	64.937	ENSIPUG00000023725	stau1	100	64.937	Ictalurus_punctatus
ENSGMOG00000016850	stau1	71	62.549	ENSSTOG00000003634	STAU1	99	62.549	Ictidomys_tridecemlineatus
ENSGMOG00000016850	stau1	71	61.765	ENSJJAG00000020032	Stau1	99	61.765	Jaculus_jaculus
ENSGMOG00000016850	stau1	99	68.811	ENSKMAG00000007135	stau1	99	69.790	Kryptolebias_marmoratus
ENSGMOG00000016850	stau1	100	72.370	ENSLBEG00000020172	stau1	100	72.370	Labrus_bergylta
ENSGMOG00000016850	stau1	98	63.916	ENSLACG00000016157	STAU1	97	63.916	Latimeria_chalumnae
ENSGMOG00000016850	stau1	100	66.992	ENSLOCG00000003134	stau1	100	67.782	Lepisosteus_oculatus
ENSGMOG00000016850	stau1	74	63.396	ENSLAFG00000003238	STAU1	99	63.396	Loxodonta_africana
ENSGMOG00000016850	stau1	96	65.466	ENSMFAG00000040931	STAU1	99	63.707	Macaca_fascicularis
ENSGMOG00000016850	stau1	96	58.169	ENSMMUG00000002302	STAU1	99	63.707	Macaca_mulatta
ENSGMOG00000016850	stau1	96	62.094	ENSMNEG00000033821	STAU1	99	63.707	Macaca_nemestrina
ENSGMOG00000016850	stau1	96	62.094	ENSMLEG00000031383	STAU1	89	63.296	Mandrillus_leucophaeus
ENSGMOG00000016850	stau1	100	74.334	ENSMAMG00000017586	stau1	100	75.474	Mastacembelus_armatus
ENSGMOG00000016850	stau1	100	72.829	ENSMZEG00005015605	stau1	100	72.829	Maylandia_zebra
ENSGMOG00000016850	stau1	100	62.993	ENSMGAG00000004719	STAU1	100	62.993	Meleagris_gallopavo
ENSGMOG00000016850	stau1	71	59.687	ENSMAUG00000013846	Stau1	99	59.687	Mesocricetus_auratus
ENSGMOG00000016850	stau1	77	60.721	ENSMICG00000001995	STAU1	89	62.243	Microcebus_murinus
ENSGMOG00000016850	stau1	71	60.470	ENSMOCG00000018743	Stau1	99	60.470	Microtus_ochrogaster
ENSGMOG00000016850	stau1	100	69.705	ENSMMOG00000015455	stau1	100	70.126	Mola_mola
ENSGMOG00000016850	stau1	96	63.348	ENSMODG00000016276	STAU1	99	63.348	Monodelphis_domestica
ENSGMOG00000016850	stau1	99	73.736	ENSMALG00000000045	stau1	99	73.736	Monopterus_albus
ENSGMOG00000016850	stau1	71	60.277	MGP_CAROLIEiJ_G0024699	Stau1	100	60.158	Mus_caroli
ENSGMOG00000016850	stau1	71	60.079	ENSMUSG00000039536	Stau1	100	59.961	Mus_musculus
ENSGMOG00000016850	stau1	71	59.687	MGP_PahariEiJ_G0026141	Stau1	99	59.687	Mus_pahari
ENSGMOG00000016850	stau1	71	60.552	MGP_SPRETEiJ_G0025619	Stau1	100	60.433	Mus_spretus
ENSGMOG00000016850	stau1	96	62.084	ENSMPUG00000017581	STAU1	99	62.084	Mustela_putorius_furo
ENSGMOG00000016850	stau1	96	62.524	ENSMLUG00000008407	STAU1	86	62.524	Myotis_lucifugus
ENSGMOG00000016850	stau1	71	61.644	ENSNGAG00000007108	Stau1	99	61.644	Nannospalax_galili
ENSGMOG00000016850	stau1	100	73.007	ENSNBRG00000017596	stau1	100	73.007	Neolamprologus_brichardi
ENSGMOG00000016850	stau1	77	61.733	ENSNLEG00000006955	STAU1	99	63.320	Nomascus_leucogenys
ENSGMOG00000016850	stau1	66	66.879	ENSMEUG00000003263	STAU1	80	66.879	Notamacropus_eugenii
ENSGMOG00000016850	stau1	74	61.466	ENSOPRG00000014569	STAU1	89	61.466	Ochotona_princeps
ENSGMOG00000016850	stau1	72	62.089	ENSODEG00000006523	STAU1	99	62.476	Octodon_degus
ENSGMOG00000016850	stau1	100	71.429	ENSONIG00000004152	stau1	99	71.429	Oreochromis_niloticus
ENSGMOG00000016850	stau1	100	61.892	ENSOANG00000006394	STAU1	100	61.892	Ornithorhynchus_anatinus
ENSGMOG00000016850	stau1	74	62.900	ENSOCUG00000006214	STAU1	88	62.900	Oryctolagus_cuniculus
ENSGMOG00000016850	stau1	100	71.989	ENSOMEG00000002388	stau1	100	71.989	Oryzias_melastigma
ENSGMOG00000016850	stau1	72	42.912	ENSOGAG00000028222	-	99	42.912	Otolemur_garnettii
ENSGMOG00000016850	stau1	96	61.974	ENSOGAG00000002127	STAU1	87	62.547	Otolemur_garnettii
ENSGMOG00000016850	stau1	96	61.439	ENSOARG00000012204	STAU1	99	61.439	Ovis_aries
ENSGMOG00000016850	stau1	96	58.169	ENSPPAG00000032023	STAU1	99	64.674	Pan_paniscus
ENSGMOG00000016850	stau1	96	63.842	ENSPPRG00000003436	STAU1	99	63.250	Panthera_pardus
ENSGMOG00000016850	stau1	96	63.842	ENSPTIG00000011768	STAU1	99	62.786	Panthera_tigris_altaica
ENSGMOG00000016850	stau1	96	58.169	ENSPTRG00000023130	STAU1	99	64.674	Pan_troglodytes
ENSGMOG00000016850	stau1	77	62.094	ENSPANG00000020560	STAU1	99	59.266	Papio_anubis
ENSGMOG00000016850	stau1	99	68.194	ENSPKIG00000024588	stau1	99	69.167	Paramormyrops_kingsleyae
ENSGMOG00000016850	stau1	100	64.296	ENSPSIG00000010731	STAU1	99	64.017	Pelodiscus_sinensis
ENSGMOG00000016850	stau1	100	69.231	ENSPMGG00000018553	stau1	93	79.048	Periophthalmus_magnuspinnatus
ENSGMOG00000016850	stau1	71	60.470	ENSPEMG00000022045	Stau1	99	60.470	Peromyscus_maniculatus_bairdii
ENSGMOG00000016850	stau1	96	63.913	ENSPCIG00000023269	STAU1	99	63.570	Phascolarctos_cinereus
ENSGMOG00000016850	stau1	100	70.391	ENSPFOG00000017253	stau1	100	70.391	Poecilia_formosa
ENSGMOG00000016850	stau1	60	75.058	ENSPLAG00000014829	stau1	96	75.062	Poecilia_latipinna
ENSGMOG00000016850	stau1	100	67.316	ENSPMEG00000007495	stau1	100	67.598	Poecilia_mexicana
ENSGMOG00000016850	stau1	100	70.531	ENSPREG00000003477	stau1	100	70.531	Poecilia_reticulata
ENSGMOG00000016850	stau1	96	61.802	ENSPPYG00000011111	STAU1	89	63.364	Pongo_abelii
ENSGMOG00000016850	stau1	73	55.556	ENSPCAG00000002459	STAU1	88	56.972	Procavia_capensis
ENSGMOG00000016850	stau1	96	60.650	ENSPCOG00000027746	STAU1	99	62.162	Propithecus_coquereli
ENSGMOG00000016850	stau1	66	62.745	ENSPVAG00000015019	STAU1	75	62.745	Pteropus_vampyrus
ENSGMOG00000016850	stau1	100	73.007	ENSPNYG00000014436	stau1	100	73.007	Pundamilia_nyererei
ENSGMOG00000016850	stau1	100	67.503	ENSPNAG00000011323	stau1	99	68.994	Pygocentrus_nattereri
ENSGMOG00000016850	stau1	71	60.078	ENSRNOG00000007781	Stau1	99	60.078	Rattus_norvegicus
ENSGMOG00000016850	stau1	72	63.743	ENSRBIG00000037345	STAU1	99	63.743	Rhinopithecus_bieti
ENSGMOG00000016850	stau1	96	62.094	ENSRROG00000039008	STAU1	99	63.443	Rhinopithecus_roxellana
ENSGMOG00000016850	stau1	77	62.162	ENSSBOG00000034448	STAU1	99	61.079	Saimiri_boliviensis_boliviensis
ENSGMOG00000016850	stau1	96	63.203	ENSSHAG00000009492	STAU1	99	63.203	Sarcophilus_harrisii
ENSGMOG00000016850	stau1	99	69.832	ENSSFOG00015021497	stau1	99	69.832	Scleropages_formosus
ENSGMOG00000016850	stau1	100	73.492	ENSSMAG00000017410	stau1	100	73.492	Scophthalmus_maximus
ENSGMOG00000016850	stau1	100	74.334	ENSSDUG00000019439	stau1	100	74.334	Seriola_dumerili
ENSGMOG00000016850	stau1	100	74.053	ENSSLDG00000025040	stau1	100	74.474	Seriola_lalandi_dorsalis
ENSGMOG00000016850	stau1	100	64.395	ENSSPUG00000017983	STAU1	99	65.362	Sphenodon_punctatus
ENSGMOG00000016850	stau1	100	73.492	ENSSPAG00000019275	stau1	100	73.913	Stegastes_partitus
ENSGMOG00000016850	stau1	96	61.552	ENSSSCG00000027444	STAU1	99	65.323	Sus_scrofa
ENSGMOG00000016850	stau1	100	62.144	ENSTGUG00000008784	STAU1	100	62.144	Taeniopygia_guttata
ENSGMOG00000016850	stau1	100	69.650	ENSTRUG00000005837	stau1	100	71.049	Takifugu_rubripes
ENSGMOG00000016850	stau1	96	70.972	ENSTNIG00000014732	stau1	99	70.972	Tetraodon_nigroviridis
ENSGMOG00000016850	stau1	59	67.049	ENSTBEG00000009404	STAU1	71	65.266	Tupaia_belangeri
ENSGMOG00000016850	stau1	66	63.482	ENSTTRG00000004285	STAU1	80	63.482	Tursiops_truncatus
ENSGMOG00000016850	stau1	72	61.641	ENSUAMG00000025449	STAU1	99	61.641	Ursus_americanus
ENSGMOG00000016850	stau1	55	58.250	ENSUMAG00000024475	STAU1	89	58.250	Ursus_maritimus
ENSGMOG00000016850	stau1	77	61.733	ENSVPAG00000001313	STAU1	89	62.921	Vicugna_pacos
ENSGMOG00000016850	stau1	96	61.418	ENSVVUG00000022325	STAU1	99	61.135	Vulpes_vulpes
ENSGMOG00000016850	stau1	99	61.765	ENSXETG00000001783	stau1	99	61.485	Xenopus_tropicalis
ENSGMOG00000016850	stau1	56	76.808	ENSXCOG00000008804	stau1	98	78.304	Xiphophorus_couchianus
ENSGMOG00000016850	stau1	100	70.629	ENSXMAG00000016175	stau1	100	70.629	Xiphophorus_maculatus