EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSGMOG00000016948 (Gene tree)
Gene ID: -
Gene Symbol: slirp
Alias: sb:cb657|si:ch73-276n11.1
Full Name: SRA stem-loop interacting RNA binding protein
Gene Type: protein_coding
Species: Gadus_morhua
Status: putative
Strand: Plus strand
Length: 1041 bases
Position: chrGeneScaffold_2687:41185-42225
Accession: ZDB-GENE-030729-30
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSGMOP00000018196	RRM_1	PF00076.22	9.7e-13	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSGMOT00000018644	-	312	-	ENSGMOP00000018196	103 (aa)	-	UPI00023F3AB7

Gene Model

Click here to download ENSGMOG00000016948's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSGMOG00000016948's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSGMOG00000016948	slirp	83	48.276	ENSG00000119705	SLIRP	92	55.714	Homo_sapiens
ENSGMOG00000016948	slirp	93	72.165	ENSAPOG00000001298	slirp	97	72.165	Acanthochromis_polyacanthus
ENSGMOG00000016948	slirp	67	57.143	ENSAMEG00000003975	SLIRP	77	57.143	Ailuropoda_melanoleuca
ENSGMOG00000016948	slirp	95	68.687	ENSACIG00000023083	slirp	98	68.687	Amphilophus_citrinellus
ENSGMOG00000016948	slirp	92	73.958	ENSAOCG00000006342	slirp	97	73.958	Amphiprion_ocellaris
ENSGMOG00000016948	slirp	92	73.958	ENSAPEG00000015917	slirp	97	73.958	Amphiprion_percula
ENSGMOG00000016948	slirp	92	73.958	ENSAPEG00000015719	-	98	73.958	Amphiprion_percula
ENSGMOG00000016948	slirp	93	64.948	ENSATEG00000013525	slirp	97	64.948	Anabas_testudineus
ENSGMOG00000016948	slirp	94	58.163	ENSAMXG00000018693	slirp	98	58.163	Astyanax_mexicanus
ENSGMOG00000016948	slirp	71	58.108	ENSCJAG00000016946	SLIRP	72	58.209	Callithrix_jacchus
ENSGMOG00000016948	slirp	71	58.108	ENSCAFG00020015876	-	67	58.108	Canis_lupus_dingo
ENSGMOG00000016948	slirp	71	56.757	ENSCCAG00000030130	SLIRP	81	48.864	Cebus_capucinus
ENSGMOG00000016948	slirp	83	48.276	ENSCATG00000036327	SLIRP	79	54.545	Cercocebus_atys
ENSGMOG00000016948	slirp	83	49.425	ENSCSAG00000011736	SLIRP	80	49.425	Chlorocebus_sabaeus
ENSGMOG00000016948	slirp	73	59.211	ENSCPBG00000026327	SLIRP	77	59.211	Chrysemys_picta_bellii
ENSGMOG00000016948	slirp	73	57.143	ENSCANG00000032892	SLIRP	79	57.143	Colobus_angolensis_palliatus
ENSGMOG00000016948	slirp	95	44.554	ENSCGRG00001024068	Slirp	91	44.554	Cricetulus_griseus_chok1gshd
ENSGMOG00000016948	slirp	95	44.554	ENSCGRG00000017440	Slirp	91	44.554	Cricetulus_griseus_crigri
ENSGMOG00000016948	slirp	89	56.383	ENSCSEG00000015766	slirp	96	56.383	Cynoglossus_semilaevis
ENSGMOG00000016948	slirp	76	77.215	ENSCVAG00000012504	slirp	78	77.215	Cyprinodon_variegatus
ENSGMOG00000016948	slirp	89	73.118	ENSDARG00000097753	slirp	95	72.449	Danio_rerio
ENSGMOG00000016948	slirp	82	43.529	ENSDNOG00000007721	SLIRP	67	48.649	Dasypus_novemcinctus
ENSGMOG00000016948	slirp	73	51.316	ENSDORG00000012379	Slirp	68	51.316	Dipodomys_ordii
ENSGMOG00000016948	slirp	85	44.944	ENSETEG00000010345	SLIRP	78	44.944	Echinops_telfairi
ENSGMOG00000016948	slirp	71	56.757	ENSEASG00005020193	SLIRP	67	56.757	Equus_asinus_asinus
ENSGMOG00000016948	slirp	80	46.988	ENSEEUG00000007257	SLIRP	82	46.988	Erinaceus_europaeus
ENSGMOG00000016948	slirp	91	71.579	ENSELUG00000016800	slirp	94	71.579	Esox_lucius
ENSGMOG00000016948	slirp	64	58.209	ENSFCAG00000036326	SLIRP	68	58.209	Felis_catus
ENSGMOG00000016948	slirp	74	49.351	ENSFALG00000012583	SLIRP	89	43.617	Ficedula_albicollis
ENSGMOG00000016948	slirp	83	49.425	ENSFDAG00000008347	SLIRP	77	49.425	Fukomys_damarensis
ENSGMOG00000016948	slirp	74	71.429	ENSFHEG00000004709	slirp	84	71.429	Fundulus_heteroclitus
ENSGMOG00000016948	slirp	92	43.878	ENSGALG00000031238	SLIRP	99	43.878	Gallus_gallus
ENSGMOG00000016948	slirp	93	68.041	ENSGAFG00000010998	slirp	97	68.041	Gambusia_affinis
ENSGMOG00000016948	slirp	77	80.247	ENSGACG00000020137	slirp	94	80.247	Gasterosteus_aculeatus
ENSGMOG00000016948	slirp	96	57.282	ENSGAGG00000009953	SLIRP	71	57.282	Gopherus_agassizii
ENSGMOG00000016948	slirp	83	48.276	ENSGGOG00000011059	-	86	51.250	Gorilla_gorilla
ENSGMOG00000016948	slirp	68	53.521	ENSHGLG00000018491	SLIRP	64	53.521	Heterocephalus_glaber_female
ENSGMOG00000016948	slirp	68	53.521	ENSHGLG00100014153	SLIRP	64	53.521	Heterocephalus_glaber_male
ENSGMOG00000016948	slirp	94	70.408	ENSHCOG00000006795	slirp	99	70.408	Hippocampus_comes
ENSGMOG00000016948	slirp	95	69.697	ENSIPUG00000010214	SLIRP	99	69.697	Ictalurus_punctatus
ENSGMOG00000016948	slirp	85	48.315	ENSSTOG00000034316	SLIRP	78	48.315	Ictidomys_tridecemlineatus
ENSGMOG00000016948	slirp	93	60.825	ENSKMAG00000002038	slirp	93	60.825	Kryptolebias_marmoratus
ENSGMOG00000016948	slirp	93	70.103	ENSLBEG00000007564	slirp	97	70.103	Labrus_bergylta
ENSGMOG00000016948	slirp	94	65.306	ENSLACG00000013434	SLIRP	94	65.306	Latimeria_chalumnae
ENSGMOG00000016948	slirp	83	49.425	ENSMFAG00000042960	SLIRP	79	54.545	Macaca_fascicularis
ENSGMOG00000016948	slirp	73	54.545	ENSMMUG00000029256	SLIRP	79	54.545	Macaca_mulatta
ENSGMOG00000016948	slirp	83	49.425	ENSMNEG00000028921	SLIRP	79	54.545	Macaca_nemestrina
ENSGMOG00000016948	slirp	73	54.545	ENSMLEG00000043644	SLIRP	79	54.545	Mandrillus_leucophaeus
ENSGMOG00000016948	slirp	92	75.000	ENSMZEG00005004617	slirp	97	75.000	Maylandia_zebra
ENSGMOG00000016948	slirp	84	49.438	ENSMAUG00000003857	Slirp	80	49.438	Mesocricetus_auratus
ENSGMOG00000016948	slirp	69	55.556	ENSMICG00000012080	SLIRP	67	55.556	Microcebus_murinus
ENSGMOG00000016948	slirp	72	56.000	ENSMOCG00000016019	Slirp	69	55.714	Microtus_ochrogaster
ENSGMOG00000016948	slirp	93	74.227	ENSMMOG00000018268	slirp	97	74.227	Mola_mola
ENSGMOG00000016948	slirp	67	52.857	ENSMODG00000005207	-	99	52.857	Monodelphis_domestica
ENSGMOG00000016948	slirp	93	63.918	ENSMALG00000012581	slirp	99	63.918	Monopterus_albus
ENSGMOG00000016948	slirp	72	57.333	MGP_CAROLIEiJ_G0017995	Slirp	69	57.333	Mus_caroli
ENSGMOG00000016948	slirp	72	57.333	ENSMUSG00000021040	Slirp	71	55.714	Mus_musculus
ENSGMOG00000016948	slirp	72	57.333	MGP_SPRETEiJ_G0018840	Slirp	67	57.333	Mus_spretus
ENSGMOG00000016948	slirp	71	55.405	ENSMLUG00000029544	-	67	54.667	Myotis_lucifugus
ENSGMOG00000016948	slirp	70	56.164	ENSMLUG00000024998	-	66	56.164	Myotis_lucifugus
ENSGMOG00000016948	slirp	71	50.000	ENSNGAG00000016363	Slirp	71	50.000	Nannospalax_galili
ENSGMOG00000016948	slirp	84	44.318	ENSNLEG00000027238	-	80	51.429	Nomascus_leucogenys
ENSGMOG00000016948	slirp	84	44.318	ENSNLEG00000032459	-	81	44.318	Nomascus_leucogenys
ENSGMOG00000016948	slirp	71	55.405	ENSODEG00000012580	SLIRP	76	55.714	Octodon_degus
ENSGMOG00000016948	slirp	92	75.000	ENSONIG00000011692	slirp	97	75.000	Oreochromis_niloticus
ENSGMOG00000016948	slirp	85	52.747	ENSOANG00000022366	SLIRP	81	52.747	Ornithorhynchus_anatinus
ENSGMOG00000016948	slirp	93	74.227	ENSORLG00000010761	slirp	75	74.227	Oryzias_latipes
ENSGMOG00000016948	slirp	93	73.196	ENSORLG00020022188	slirp	97	73.196	Oryzias_latipes_hni
ENSGMOG00000016948	slirp	95	74.747	ENSORLG00015020171	slirp	98	74.747	Oryzias_latipes_hsok
ENSGMOG00000016948	slirp	93	75.258	ENSOMEG00000019321	slirp	97	75.258	Oryzias_melastigma
ENSGMOG00000016948	slirp	83	48.276	ENSPPAG00000040710	-	86	51.250	Pan_paniscus
ENSGMOG00000016948	slirp	64	58.209	ENSPPRG00000014350	SLIRP	68	58.209	Panthera_pardus
ENSGMOG00000016948	slirp	64	58.209	ENSPTIG00000014196	SLIRP	68	58.209	Panthera_tigris_altaica
ENSGMOG00000016948	slirp	84	51.136	ENSPTRG00000030691	SLIRP	91	47.525	Pan_troglodytes
ENSGMOG00000016948	slirp	83	50.575	ENSPANG00000026323	SLIRP	79	55.844	Papio_anubis
ENSGMOG00000016948	slirp	62	70.769	ENSPKIG00000008831	slirp	64	70.769	Paramormyrops_kingsleyae
ENSGMOG00000016948	slirp	76	74.684	ENSPMGG00000010541	slirp	91	74.684	Periophthalmus_magnuspinnatus
ENSGMOG00000016948	slirp	69	55.556	ENSPEMG00000013234	Slirp	69	54.286	Peromyscus_maniculatus_bairdii
ENSGMOG00000016948	slirp	76	51.899	ENSPMAG00000009355	slirp	88	51.899	Petromyzon_marinus
ENSGMOG00000016948	slirp	67	52.857	ENSPCIG00000026842	-	75	52.857	Phascolarctos_cinereus
ENSGMOG00000016948	slirp	93	69.072	ENSPFOG00000006758	slirp	97	69.072	Poecilia_formosa
ENSGMOG00000016948	slirp	93	69.072	ENSPLAG00000011140	slirp	97	69.072	Poecilia_latipinna
ENSGMOG00000016948	slirp	93	69.072	ENSPMEG00000019535	slirp	97	69.072	Poecilia_mexicana
ENSGMOG00000016948	slirp	93	69.072	ENSPREG00000011673	slirp	97	69.072	Poecilia_reticulata
ENSGMOG00000016948	slirp	83	47.126	ENSPPYG00000006030	SLIRP	92	45.000	Pongo_abelii
ENSGMOG00000016948	slirp	72	53.333	ENSPCOG00000015159	SLIRP	67	55.556	Propithecus_coquereli
ENSGMOG00000016948	slirp	94	71.429	ENSPNAG00000008633	slirp	99	71.429	Pygocentrus_nattereri
ENSGMOG00000016948	slirp	84	53.409	ENSRBIG00000032222	-	79	55.844	Rhinopithecus_bieti
ENSGMOG00000016948	slirp	64	58.209	ENSRBIG00000032998	-	62	58.209	Rhinopithecus_bieti
ENSGMOG00000016948	slirp	62	60.000	ENSRBIG00000031396	-	65	60.000	Rhinopithecus_bieti
ENSGMOG00000016948	slirp	71	54.054	ENSRBIG00000035817	-	68	54.054	Rhinopithecus_bieti
ENSGMOG00000016948	slirp	68	60.563	ENSRROG00000041312	-	70	60.563	Rhinopithecus_roxellana
ENSGMOG00000016948	slirp	84	53.409	ENSRROG00000036656	-	79	55.844	Rhinopithecus_roxellana
ENSGMOG00000016948	slirp	64	59.701	ENSRROG00000017133	-	70	59.701	Rhinopithecus_roxellana
ENSGMOG00000016948	slirp	62	61.538	ENSRROG00000035604	-	65	61.538	Rhinopithecus_roxellana
ENSGMOG00000016948	slirp	65	58.824	ENSSBOG00000020014	SLIRP	72	59.701	Saimiri_boliviensis_boliviensis
ENSGMOG00000016948	slirp	81	61.905	ENSSFOG00015011165	slirp	85	61.905	Scleropages_formosus
ENSGMOG00000016948	slirp	93	48.485	ENSSMAG00000012930	slirp	97	48.485	Scophthalmus_maximus
ENSGMOG00000016948	slirp	93	80.412	ENSSDUG00000021883	slirp	64	80.412	Seriola_dumerili
ENSGMOG00000016948	slirp	93	80.412	ENSSLDG00000023136	slirp	88	80.412	Seriola_lalandi_dorsalis
ENSGMOG00000016948	slirp	84	61.538	ENSSPUG00000009346	SLIRP	93	61.538	Sphenodon_punctatus
ENSGMOG00000016948	slirp	93	69.072	ENSSPAG00000013477	slirp	97	69.072	Stegastes_partitus
ENSGMOG00000016948	slirp	96	48.000	ENSSSCG00000028167	SLIRP	86	48.000	Sus_scrofa
ENSGMOG00000016948	slirp	74	48.052	ENSTGUG00000012337	SLIRP	92	44.330	Taeniopygia_guttata
ENSGMOG00000016948	slirp	95	67.000	ENSTRUG00000020127	slirp	99	67.000	Takifugu_rubripes
ENSGMOG00000016948	slirp	83	50.575	ENSUAMG00000022445	SLIRP	78	50.575	Ursus_americanus
ENSGMOG00000016948	slirp	71	56.757	ENSUMAG00000007166	SLIRP	67	56.757	Ursus_maritimus
ENSGMOG00000016948	slirp	83	49.425	ENSVPAG00000001781	SLIRP	81	49.425	Vicugna_pacos
ENSGMOG00000016948	slirp	85	52.809	ENSVVUG00000004436	SLIRP	78	52.809	Vulpes_vulpes
ENSGMOG00000016948	slirp	77	70.000	ENSXETG00000030343	SLIRP	90	70.000	Xenopus_tropicalis
ENSGMOG00000016948	slirp	93	68.041	ENSXCOG00000009422	slirp	97	68.041	Xiphophorus_couchianus
ENSGMOG00000016948	slirp	93	70.103	ENSXMAG00000015655	slirp	97	70.103	Xiphophorus_maculatus