EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSGMOG00000017115 (Gene tree)
Gene ID: -
Gene Symbol: lsm14b
Alias: zRAP55|zgc:55673
Full Name: LSM family member 14B
Gene Type: protein_coding
Species: Gadus_morhua
Status: putative
Strand: Minus strand
Length: 2001 bases
Position: chrGeneScaffold_2467:71862-73862
Accession: ZDB-GENE-040426-779
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSGMOP00000018401	FDF	PF09532.10	3.1e-12	1	1
ENSGMOP00000018401	SM-ATX	PF14438.6	1.3e-08	1	1
ENSGMOP00000018401	LSM14	PF12701.7	1.8e-31	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSGMOT00000018853	-	1002	-	ENSGMOP00000018401	333 (aa)	-	UPI00023F37B0

Gene Model

Click here to download ENSGMOG00000017115's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSGMOG00000017115's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSGMOG00000017115	lsm14b	87	45.906	ENSGMOG00000002573	LSM14B	99	45.098
ENSGMOG00000017115	lsm14b	89	42.287	ENSGMOG00000005472	lsm14aa	88	43.216

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSGMOG00000017115	lsm14b	91	51.549	ENSG00000149657	LSM14B	100	51.938	Homo_sapiens
ENSGMOG00000017115	lsm14b	99	64.611	ENSAPOG00000001780	lsm14b	100	67.473	Acanthochromis_polyacanthus
ENSGMOG00000017115	lsm14b	52	40.571	ENSAPOG00000010003	-	58	54.255	Acanthochromis_polyacanthus
ENSGMOG00000017115	lsm14b	98	45.154	ENSAMEG00000013430	LSM14B	99	44.787	Ailuropoda_melanoleuca
ENSGMOG00000017115	lsm14b	98	68.300	ENSACIG00000012266	lsm14b	99	68.946	Amphilophus_citrinellus
ENSGMOG00000017115	lsm14b	56	47.596	ENSACIG00000003147	LSM14B	97	47.768	Amphilophus_citrinellus
ENSGMOG00000017115	lsm14b	99	65.147	ENSAOCG00000012380	lsm14b	100	66.216	Amphiprion_ocellaris
ENSGMOG00000017115	lsm14b	95	49.465	ENSAOCG00000006667	LSM14B	96	50.000	Amphiprion_ocellaris
ENSGMOG00000017115	lsm14b	99	64.820	ENSAPEG00000023633	lsm14b	100	68.245	Amphiprion_percula
ENSGMOG00000017115	lsm14b	99	60.963	ENSATEG00000016603	lsm14b	100	64.171	Anabas_testudineus
ENSGMOG00000017115	lsm14b	53	66.667	ENSATEG00000015895	LSM14B	66	58.974	Anabas_testudineus
ENSGMOG00000017115	lsm14b	79	42.254	ENSAPLG00000013203	LSM14B	99	40.921	Anas_platyrhynchos
ENSGMOG00000017115	lsm14b	98	51.151	ENSACAG00000016195	LSM14B	99	52.196	Anolis_carolinensis
ENSGMOG00000017115	lsm14b	99	45.412	ENSANAG00000037915	LSM14B	100	48.705	Aotus_nancymaae
ENSGMOG00000017115	lsm14b	99	62.366	ENSACLG00000019663	lsm14b	99	66.398	Astatotilapia_calliptera
ENSGMOG00000017115	lsm14b	98	57.468	ENSAMXG00000002865	lsm14b	99	58.228	Astyanax_mexicanus
ENSGMOG00000017115	lsm14b	91	45.431	ENSBTAG00000021558	LSM14B	100	44.941	Bos_taurus
ENSGMOG00000017115	lsm14b	91	50.980	ENSCJAG00000014434	LSM14B	100	51.020	Callithrix_jacchus
ENSGMOG00000017115	lsm14b	88	41.753	ENSCAFG00000012518	LSM14B	98	41.085	Canis_familiaris
ENSGMOG00000017115	lsm14b	99	48.878	ENSCAFG00020022150	LSM14B	100	49.875	Canis_lupus_dingo
ENSGMOG00000017115	lsm14b	91	50.986	ENSCHIG00000010284	-	100	51.026	Capra_hircus
ENSGMOG00000017115	lsm14b	98	38.965	ENSCHIG00000022681	-	100	39.142	Capra_hircus
ENSGMOG00000017115	lsm14b	78	47.756	ENSTSYG00000031914	LSM14B	89	48.256	Carlito_syrichta
ENSGMOG00000017115	lsm14b	78	48.562	ENSCAPG00000013059	LSM14B	100	48.837	Cavia_aperea
ENSGMOG00000017115	lsm14b	78	48.397	ENSCPOG00000038080	LSM14B	100	48.688	Cavia_porcellus
ENSGMOG00000017115	lsm14b	91	39.003	ENSCCAG00000024900	-	83	34.726	Cebus_capucinus
ENSGMOG00000017115	lsm14b	91	51.404	ENSCCAG00000021267	LSM14B	100	49.741	Cebus_capucinus
ENSGMOG00000017115	lsm14b	99	45.775	ENSCATG00000036006	LSM14B	100	51.938	Cercocebus_atys
ENSGMOG00000017115	lsm14b	78	47.910	ENSCLAG00000003186	LSM14B	100	48.397	Chinchilla_lanigera
ENSGMOG00000017115	lsm14b	99	45.775	ENSCSAG00000015729	LSM14B	100	47.183	Chlorocebus_sabaeus
ENSGMOG00000017115	lsm14b	64	34.351	ENSCHOG00000006997	-	100	33.588	Choloepus_hoffmanni
ENSGMOG00000017115	lsm14b	89	46.907	ENSCPBG00000027065	LSM14B	99	46.190	Chrysemys_picta_bellii
ENSGMOG00000017115	lsm14b	78	47.115	ENSCANG00000036986	LSM14B	100	47.965	Colobus_angolensis_palliatus
ENSGMOG00000017115	lsm14b	99	50.777	ENSCGRG00001018399	Lsm14b	100	52.564	Cricetulus_griseus_chok1gshd
ENSGMOG00000017115	lsm14b	57	45.116	ENSCGRG00000002484	-	99	45.116	Cricetulus_griseus_crigri
ENSGMOG00000017115	lsm14b	56	36.996	ENSCGRG00000006111	-	98	39.661	Cricetulus_griseus_crigri
ENSGMOG00000017115	lsm14b	99	64.644	ENSCSEG00000004722	lsm14b	100	64.116	Cynoglossus_semilaevis
ENSGMOG00000017115	lsm14b	95	47.594	ENSCSEG00000020669	LSM14B	76	62.941	Cynoglossus_semilaevis
ENSGMOG00000017115	lsm14b	58	44.660	ENSCVAG00000012433	-	92	43.204	Cyprinodon_variegatus
ENSGMOG00000017115	lsm14b	89	56.863	ENSDARG00000025386	lsm14b	99	53.506	Danio_rerio
ENSGMOG00000017115	lsm14b	65	38.689	ENSDNOG00000025246	LSM14B	100	36.721	Dasypus_novemcinctus
ENSGMOG00000017115	lsm14b	88	47.851	ENSDORG00000016683	Lsm14b	100	39.869	Dipodomys_ordii
ENSGMOG00000017115	lsm14b	91	44.886	ENSETEG00000001869	-	97	43.631	Echinops_telfairi
ENSGMOG00000017115	lsm14b	65	40.925	ENSEASG00005023218	LSM14B	100	49.167	Equus_asinus_asinus
ENSGMOG00000017115	lsm14b	91	51.821	ENSECAG00000010659	LSM14B	100	52.956	Equus_caballus
ENSGMOG00000017115	lsm14b	52	64.000	ENSEEUG00000007331	LSM14B	65	66.000	Erinaceus_europaeus
ENSGMOG00000017115	lsm14b	98	58.575	ENSELUG00000005780	lsm14b	99	57.632	Esox_lucius
ENSGMOG00000017115	lsm14b	89	52.464	ENSELUG00000016299	LSM14B	99	52.243	Esox_lucius
ENSGMOG00000017115	lsm14b	91	50.843	ENSFCAG00000003248	LSM14B	100	50.000	Felis_catus
ENSGMOG00000017115	lsm14b	79	41.899	ENSFALG00000010618	LSM14B	100	41.495	Ficedula_albicollis
ENSGMOG00000017115	lsm14b	78	48.077	ENSFDAG00000002214	LSM14B	100	48.688	Fukomys_damarensis
ENSGMOG00000017115	lsm14b	99	59.786	ENSFHEG00000006237	lsm14b	100	60.322	Fundulus_heteroclitus
ENSGMOG00000017115	lsm14b	68	47.970	ENSFHEG00000003362	LSM14B	71	47.687	Fundulus_heteroclitus
ENSGMOG00000017115	lsm14b	89	49.300	ENSGALG00000005125	LSM14B	99	49.354	Gallus_gallus
ENSGMOG00000017115	lsm14b	61	46.330	ENSGAFG00000013723	LSM14B	97	46.330	Gambusia_affinis
ENSGMOG00000017115	lsm14b	99	54.856	ENSGAFG00000020318	lsm14b	100	57.105	Gambusia_affinis
ENSGMOG00000017115	lsm14b	100	66.310	ENSGACG00000009973	lsm14b	100	69.519	Gasterosteus_aculeatus
ENSGMOG00000017115	lsm14b	80	46.541	ENSGGOG00000005630	LSM14B	95	47.429	Gorilla_gorilla
ENSGMOG00000017115	lsm14b	91	51.977	ENSHGLG00000015055	LSM14B	100	52.332	Heterocephalus_glaber_female
ENSGMOG00000017115	lsm14b	78	47.249	ENSHGLG00100015273	LSM14B	100	48.094	Heterocephalus_glaber_male
ENSGMOG00000017115	lsm14b	93	49.311	ENSHCOG00000018747	LSM14B	95	48.753	Hippocampus_comes
ENSGMOG00000017115	lsm14b	65	56.881	ENSHCOG00000004867	lsm14b	100	58.716	Hippocampus_comes
ENSGMOG00000017115	lsm14b	100	56.923	ENSIPUG00000014946	lsm14b	95	58.974	Ictalurus_punctatus
ENSGMOG00000017115	lsm14b	78	47.452	ENSSTOG00000020482	LSM14B	100	48.116	Ictidomys_tridecemlineatus
ENSGMOG00000017115	lsm14b	98	50.394	ENSJJAG00000012728	Lsm14b	99	52.493	Jaculus_jaculus
ENSGMOG00000017115	lsm14b	89	65.015	ENSKMAG00000017524	lsm14b	100	63.395	Kryptolebias_marmoratus
ENSGMOG00000017115	lsm14b	65	47.577	ENSLBEG00000007951	LSM14B	100	46.256	Labrus_bergylta
ENSGMOG00000017115	lsm14b	87	72.464	ENSLACG00000003849	LSM14B	86	72.993	Latimeria_chalumnae
ENSGMOG00000017115	lsm14b	98	57.143	ENSLOCG00000003746	lsm14b	99	56.883	Lepisosteus_oculatus
ENSGMOG00000017115	lsm14b	79	47.950	ENSLAFG00000007492	LSM14B	100	46.132	Loxodonta_africana
ENSGMOG00000017115	lsm14b	99	45.775	ENSMFAG00000041479	LSM14B	100	51.938	Macaca_fascicularis
ENSGMOG00000017115	lsm14b	91	51.549	ENSMMUG00000014084	LSM14B	100	51.938	Macaca_mulatta
ENSGMOG00000017115	lsm14b	91	51.549	ENSMNEG00000045573	LSM14B	100	51.938	Macaca_nemestrina
ENSGMOG00000017115	lsm14b	78	47.115	ENSMLEG00000040895	LSM14B	100	47.965	Mandrillus_leucophaeus
ENSGMOG00000017115	lsm14b	100	60.317	ENSMAMG00000020539	lsm14b	100	62.069	Mastacembelus_armatus
ENSGMOG00000017115	lsm14b	95	50.681	ENSMAMG00000024124	LSM14B	96	49.046	Mastacembelus_armatus
ENSGMOG00000017115	lsm14b	99	62.097	ENSMZEG00005000987	lsm14b	99	66.129	Maylandia_zebra
ENSGMOG00000017115	lsm14b	89	47.753	ENSMZEG00005026001	LSM14B	77	63.855	Maylandia_zebra
ENSGMOG00000017115	lsm14b	80	45.122	ENSMGAG00000005300	LSM14B	99	45.278	Meleagris_gallopavo
ENSGMOG00000017115	lsm14b	99	50.646	ENSMAUG00000020700	Lsm14b	100	49.741	Mesocricetus_auratus
ENSGMOG00000017115	lsm14b	91	51.685	ENSMICG00000014675	LSM14B	100	52.041	Microcebus_murinus
ENSGMOG00000017115	lsm14b	99	51.163	ENSMOCG00000020600	Lsm14b	100	51.813	Microtus_ochrogaster
ENSGMOG00000017115	lsm14b	56	35.000	ENSMOCG00000005119	-	93	36.742	Microtus_ochrogaster
ENSGMOG00000017115	lsm14b	89	55.183	ENSMMOG00000017321	LSM14B	96	55.172	Mola_mola
ENSGMOG00000017115	lsm14b	90	60.623	ENSMMOG00000020042	lsm14b	98	62.500	Mola_mola
ENSGMOG00000017115	lsm14b	56	37.818	ENSMODG00000016690	LSM14B	100	36.393	Monodelphis_domestica
ENSGMOG00000017115	lsm14b	98	67.797	ENSMALG00000004783	lsm14b	99	67.797	Monopterus_albus
ENSGMOG00000017115	lsm14b	93	46.032	ENSMALG00000022251	LSM14B	77	64.024	Monopterus_albus
ENSGMOG00000017115	lsm14b	99	51.163	MGP_CAROLIEiJ_G0024770	Lsm14b	100	52.713	Mus_caroli
ENSGMOG00000017115	lsm14b	99	51.163	ENSMUSG00000039108	Lsm14b	100	52.713	Mus_musculus
ENSGMOG00000017115	lsm14b	99	50.900	MGP_PahariEiJ_G0026214	Lsm14b	100	52.442	Mus_pahari
ENSGMOG00000017115	lsm14b	99	51.163	MGP_SPRETEiJ_G0025693	Lsm14b	100	52.713	Mus_spretus
ENSGMOG00000017115	lsm14b	84	42.588	ENSMPUG00000007584	LSM14B	100	43.564	Mustela_putorius_furo
ENSGMOG00000017115	lsm14b	99	51.163	ENSMLUG00000000304	LSM14B	100	52.577	Myotis_lucifugus
ENSGMOG00000017115	lsm14b	87	46.512	ENSNLEG00000015757	LSM14B	100	48.276	Nomascus_leucogenys
ENSGMOG00000017115	lsm14b	63	46.729	ENSMEUG00000006305	-	87	51.397	Notamacropus_eugenii
ENSGMOG00000017115	lsm14b	72	70.629	ENSMEUG00000008267	-	74	72.028	Notamacropus_eugenii
ENSGMOG00000017115	lsm14b	91	52.260	ENSODEG00000004099	LSM14B	100	52.591	Octodon_degus
ENSGMOG00000017115	lsm14b	99	63.172	ENSONIG00000020318	lsm14b	99	66.667	Oreochromis_niloticus
ENSGMOG00000017115	lsm14b	73	59.839	ENSOANG00000003370	LSM14B	98	59.036	Ornithorhynchus_anatinus
ENSGMOG00000017115	lsm14b	78	48.571	ENSOCUG00000006279	LSM14B	100	47.839	Oryctolagus_cuniculus
ENSGMOG00000017115	lsm14b	90	44.886	ENSORLG00000028353	LSM14B	96	41.398	Oryzias_latipes
ENSGMOG00000017115	lsm14b	99	62.634	ENSORLG00000013525	lsm14b	100	66.129	Oryzias_latipes
ENSGMOG00000017115	lsm14b	99	62.903	ENSORLG00020020553	lsm14b	100	66.129	Oryzias_latipes_hni
ENSGMOG00000017115	lsm14b	57	40.351	ENSORLG00020018191	-	97	40.000	Oryzias_latipes_hni
ENSGMOG00000017115	lsm14b	90	44.886	ENSORLG00015013157	LSM14B	76	59.006	Oryzias_latipes_hsok
ENSGMOG00000017115	lsm14b	99	62.903	ENSORLG00015016862	lsm14b	100	66.129	Oryzias_latipes_hsok
ENSGMOG00000017115	lsm14b	99	62.331	ENSOMEG00000023917	lsm14b	100	65.583	Oryzias_melastigma
ENSGMOG00000017115	lsm14b	60	42.308	ENSOMEG00000000171	-	93	42.308	Oryzias_melastigma
ENSGMOG00000017115	lsm14b	91	47.222	ENSOGAG00000003915	LSM14B	100	47.100	Otolemur_garnettii
ENSGMOG00000017115	lsm14b	78	41.761	ENSOARG00000014706	LSM14B	98	40.310	Ovis_aries
ENSGMOG00000017115	lsm14b	80	46.541	ENSPPAG00000035799	LSM14B	95	47.429	Pan_paniscus
ENSGMOG00000017115	lsm14b	91	51.966	ENSPPRG00000009197	LSM14B	100	50.000	Panthera_pardus
ENSGMOG00000017115	lsm14b	56	49.048	ENSPTIG00000021518	LSM14B	99	49.561	Panthera_tigris_altaica
ENSGMOG00000017115	lsm14b	91	51.549	ENSPTRG00000013696	LSM14B	100	51.938	Pan_troglodytes
ENSGMOG00000017115	lsm14b	91	51.549	ENSPANG00000011747	LSM14B	100	51.938	Papio_anubis
ENSGMOG00000017115	lsm14b	89	62.242	ENSPKIG00000003275	lsm14b	94	75.472	Paramormyrops_kingsleyae
ENSGMOG00000017115	lsm14b	79	47.619	ENSPSIG00000014762	LSM14B	100	47.701	Pelodiscus_sinensis
ENSGMOG00000017115	lsm14b	98	50.656	ENSPEMG00000017688	Lsm14b	99	51.969	Peromyscus_maniculatus_bairdii
ENSGMOG00000017115	lsm14b	91	53.258	ENSPCIG00000013405	LSM14B	100	52.987	Phascolarctos_cinereus
ENSGMOG00000017115	lsm14b	99	61.968	ENSPFOG00000005631	lsm14b	100	60.904	Poecilia_formosa
ENSGMOG00000017115	lsm14b	87	47.941	ENSPLAG00000005793	LSM14B	99	46.505	Poecilia_latipinna
ENSGMOG00000017115	lsm14b	99	61.436	ENSPLAG00000002449	lsm14b	100	60.372	Poecilia_latipinna
ENSGMOG00000017115	lsm14b	86	47.929	ENSPMEG00000022953	LSM14B	99	47.439	Poecilia_mexicana
ENSGMOG00000017115	lsm14b	99	61.436	ENSPMEG00000000745	lsm14b	100	61.170	Poecilia_mexicana
ENSGMOG00000017115	lsm14b	56	42.009	ENSPREG00000007828	LSM14B	100	41.434	Poecilia_reticulata
ENSGMOG00000017115	lsm14b	99	47.462	ENSPPYG00000011194	LSM14B	100	49.109	Pongo_abelii
ENSGMOG00000017115	lsm14b	91	52.661	ENSPCOG00000013625	LSM14B	100	52.041	Propithecus_coquereli
ENSGMOG00000017115	lsm14b	68	41.155	ENSPVAG00000017918	LSM14B	100	40.323	Pteropus_vampyrus
ENSGMOG00000017115	lsm14b	98	58.073	ENSPNAG00000012777	lsm14b	99	63.966	Pygocentrus_nattereri
ENSGMOG00000017115	lsm14b	99	46.714	ENSRNOG00000054557	Lsm14b	100	48.122	Rattus_norvegicus
ENSGMOG00000017115	lsm14b	78	46.965	ENSRBIG00000033461	LSM14B	99	44.477	Rhinopithecus_bieti
ENSGMOG00000017115	lsm14b	80	48.276	ENSRROG00000042949	LSM14B	100	38.235	Rhinopithecus_roxellana
ENSGMOG00000017115	lsm14b	78	47.284	ENSSBOG00000032820	LSM14B	100	44.638	Saimiri_boliviensis_boliviensis
ENSGMOG00000017115	lsm14b	80	47.170	ENSSHAG00000015528	LSM14B	97	47.714	Sarcophilus_harrisii
ENSGMOG00000017115	lsm14b	88	57.018	ENSSFOG00015004627	lsm14b	99	56.233	Scleropages_formosus
ENSGMOG00000017115	lsm14b	98	48.303	ENSSMAG00000000135	LSM14B	98	47.396	Scophthalmus_maximus
ENSGMOG00000017115	lsm14b	99	63.325	ENSSMAG00000012725	lsm14b	100	66.491	Scophthalmus_maximus
ENSGMOG00000017115	lsm14b	99	64.286	ENSSDUG00000020977	lsm14b	100	67.989	Seriola_dumerili
ENSGMOG00000017115	lsm14b	89	50.847	ENSSDUG00000022770	LSM14B	96	52.406	Seriola_dumerili
ENSGMOG00000017115	lsm14b	56	38.672	ENSSLDG00000011354	-	100	41.026	Seriola_lalandi_dorsalis
ENSGMOG00000017115	lsm14b	89	46.154	ENSSPUG00000014360	LSM14B	99	45.498	Sphenodon_punctatus
ENSGMOG00000017115	lsm14b	65	38.372	ENSSPAG00000018854	-	100	37.209	Stegastes_partitus
ENSGMOG00000017115	lsm14b	99	68.169	ENSSPAG00000020915	lsm14b	100	72.113	Stegastes_partitus
ENSGMOG00000017115	lsm14b	91	51.268	ENSSSCG00000026052	LSM14B	100	37.908	Sus_scrofa
ENSGMOG00000017115	lsm14b	79	46.395	ENSTGUG00000007884	LSM14B	100	46.132	Taeniopygia_guttata
ENSGMOG00000017115	lsm14b	99	61.995	ENSTRUG00000011354	lsm14b	100	60.108	Takifugu_rubripes
ENSGMOG00000017115	lsm14b	89	49.858	ENSTRUG00000001529	LSM14B	96	50.681	Takifugu_rubripes
ENSGMOG00000017115	lsm14b	99	61.417	ENSTNIG00000002445	lsm14b	100	60.105	Tetraodon_nigroviridis
ENSGMOG00000017115	lsm14b	68	83.333	ENSTTRG00000011043	LSM14B	100	37.685	Tursiops_truncatus
ENSGMOG00000017115	lsm14b	97	43.590	ENSUAMG00000025298	LSM14B	99	44.359	Ursus_americanus
ENSGMOG00000017115	lsm14b	97	43.590	ENSUMAG00000000480	LSM14B	99	44.359	Ursus_maritimus
ENSGMOG00000017115	lsm14b	79	46.688	ENSVVUG00000015920	LSM14B	98	45.402	Vulpes_vulpes
ENSGMOG00000017115	lsm14b	83	51.220	ENSXETG00000001997	lsm14b	99	50.456	Xenopus_tropicalis
ENSGMOG00000017115	lsm14b	99	58.133	ENSXMAG00000010013	lsm14b	100	59.200	Xiphophorus_maculatus