EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSGMOG00000017234 (Gene tree)
Gene ID: -
Gene Symbol: secisbp2
Alias: im:7147048|si:ch211-261c8.1
Full Name: SECIS binding protein 2
Gene Type: protein_coding
Species: Gadus_morhua
Status: putative
Strand: Plus strand
Length: 11815 bases
Position: chrGeneScaffold_2763:3-11817
Accession: ZDB-GENE-050208-263
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSGMOP00000018529	Ribosomal_L7Ae	PF01248.26	1.2e-20	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSGMOT00000018984	-	1434	-	ENSGMOP00000018529	478 (aa)	-	UPI00023F3929

Gene Model

Click here to download ENSGMOG00000017234's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSGMOG00000017234's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSGMOG00000017234	secisbp2	53	78.125	ENSACIG00000024185	secisbp2	55	76.744	Amphilophus_citrinellus
ENSGMOG00000017234	secisbp2	63	58.051	ENSCPBG00000005608	SECISBP2	50	74.843	Chrysemys_picta_bellii
ENSGMOG00000017234	secisbp2	72	48.087	ENSCSEG00000010220	-	72	64.500	Cynoglossus_semilaevis
ENSGMOG00000017234	secisbp2	68	71.784	ENSDARG00000073892	secisbp2	58	75.229	Danio_rerio
ENSGMOG00000017234	secisbp2	56	50.777	ENSEBUG00000008208	secisbp2	67	59.859	Eptatretus_burgeri
ENSGMOG00000017234	secisbp2	79	56.359	ENSELUG00000014795	-	75	71.296	Esox_lucius
ENSGMOG00000017234	secisbp2	69	70.800	ENSGACG00000013757	secisbp2	53	73.333	Gasterosteus_aculeatus
ENSGMOG00000017234	secisbp2	77	55.696	ENSHBUG00000007014	secisbp2	76	70.909	Haplochromis_burtoni
ENSGMOG00000017234	secisbp2	58	58.515	ENSLACG00000005735	SECISBP2	61	59.459	Latimeria_chalumnae
ENSGMOG00000017234	secisbp2	62	70.742	ENSLOCG00000011742	secisbp2	57	70.175	Lepisosteus_oculatus
ENSGMOG00000017234	secisbp2	75	56.283	ENSMMOG00000017977	secisbp2	64	83.019	Mola_mola
ENSGMOG00000017234	secisbp2	59	53.425	MGP_CAROLIEiJ_G0024231	Secisbp2l	55	70.149	Mus_caroli
ENSGMOG00000017234	secisbp2	59	53.425	ENSMUSG00000035093	Secisbp2l	54	70.149	Mus_musculus
ENSGMOG00000017234	secisbp2	51	64.198	MGP_PahariEiJ_G0025677	Secisbp2l	55	70.149	Mus_pahari
ENSGMOG00000017234	secisbp2	59	54.299	MGP_SPRETEiJ_G0025151	Secisbp2l	55	70.149	Mus_spretus
ENSGMOG00000017234	secisbp2	80	56.858	ENSONIG00000016931	secisbp2	79	70.909	Oreochromis_niloticus
ENSGMOG00000017234	secisbp2	69	66.031	ENSORLG00000000343	secisbp2	50	68.860	Oryzias_latipes
ENSGMOG00000017234	secisbp2	69	64.000	ENSPFOG00000008146	secisbp2	54	68.778	Poecilia_formosa
ENSGMOG00000017234	secisbp2	69	64.000	ENSPLAG00000004505	secisbp2	74	69.683	Poecilia_latipinna
ENSGMOG00000017234	secisbp2	70	69.732	ENSSMAG00000008472	secisbp2	50	71.739	Scophthalmus_maximus
ENSGMOG00000017234	secisbp2	69	67.611	ENSTNIG00000015576	secisbp2	69	72.273	Tetraodon_nigroviridis
ENSGMOG00000017234	secisbp2	67	54.839	ENSXETG00000029955	SECISBP2	59	55.459	Xenopus_tropicalis
ENSGMOG00000017234	secisbp2	75	56.021	ENSXCOG00000009547	secisbp2	53	83.019	Xiphophorus_couchianus