EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSGMOG00000017242 (Gene tree)
Gene ID: -
Gene Symbol: zgc:162730
Alias: fi61b04|wu:fi61b04
Full Name: zgc:162730
Gene Type: protein_coding
Species: Gadus_morhua
Status: putative
Strand: Minus strand
Length: 1008 bases
Position: chrGeneScaffold_1637:103727-104734
Accession: ZDB-GENE-030131-6366
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSGMOP00000018519	zf-CCCH	PF00642.24	9.6e-19	1	2
ENSGMOP00000018519	zf-CCCH	PF00642.24	9.6e-19	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSGMOT00000018974	-	918	-	ENSGMOP00000018519	306 (aa)	-	UPI00023F3933

Gene Model

Click here to download ENSGMOG00000017242's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSGMOG00000017242's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSGMOG00000017242	zgc:162730	80	38.492	ENSGMOG00000016803	sb:cb81	90	42.803

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSGMOG00000017242	zgc:162730	100	37.037	ENSAPOG00000011209	sb:cb81	66	42.085	Acanthochromis_polyacanthus
ENSGMOG00000017242	zgc:162730	99	67.941	ENSAPOG00000014920	zgc:162730	79	67.647	Acanthochromis_polyacanthus
ENSGMOG00000017242	zgc:162730	80	40.959	ENSACIG00000009027	sb:cb81	61	43.015	Amphilophus_citrinellus
ENSGMOG00000017242	zgc:162730	80	42.412	ENSACIG00000016314	zfp36l1a	67	41.634	Amphilophus_citrinellus
ENSGMOG00000017242	zgc:162730	70	66.516	ENSACIG00000017366	zgc:162730	97	65.000	Amphilophus_citrinellus
ENSGMOG00000017242	zgc:162730	78	38.849	ENSACIG00000017364	zgc:114130	74	38.060	Amphilophus_citrinellus
ENSGMOG00000017242	zgc:162730	99	68.529	ENSAOCG00000002001	zgc:162730	79	68.824	Amphiprion_ocellaris
ENSGMOG00000017242	zgc:162730	100	38.486	ENSAOCG00000024158	sb:cb81	63	42.188	Amphiprion_ocellaris
ENSGMOG00000017242	zgc:162730	99	68.235	ENSAPEG00000015490	zgc:162730	83	68.529	Amphiprion_percula
ENSGMOG00000017242	zgc:162730	79	37.943	ENSAPEG00000015497	zgc:114130	63	38.028	Amphiprion_percula
ENSGMOG00000017242	zgc:162730	99	66.471	ENSATEG00000008790	zgc:162730	80	67.059	Anabas_testudineus
ENSGMOG00000017242	zgc:162730	57	44.505	ENSATEG00000004546	zfp36l1a	62	38.760	Anabas_testudineus
ENSGMOG00000017242	zgc:162730	100	62.090	ENSACLG00000022112	zgc:162730	82	66.469	Astatotilapia_calliptera
ENSGMOG00000017242	zgc:162730	80	39.427	ENSACLG00000013759	sb:cb81	61	40.780	Astatotilapia_calliptera
ENSGMOG00000017242	zgc:162730	100	48.773	ENSAMXG00000035945	zgc:162730	80	48.780	Astyanax_mexicanus
ENSGMOG00000017242	zgc:162730	68	45.909	ENSAMXG00000034874	sb:cb81	64	43.396	Astyanax_mexicanus
ENSGMOG00000017242	zgc:162730	84	37.276	ENSCPBG00000021516	ZFP36L1	71	38.571	Chrysemys_picta_bellii
ENSGMOG00000017242	zgc:162730	100	37.026	ENSCSEG00000014426	sb:cb81	52	40.370	Cynoglossus_semilaevis
ENSGMOG00000017242	zgc:162730	100	68.285	ENSCSEG00000018283	zgc:162730	95	68.950	Cynoglossus_semilaevis
ENSGMOG00000017242	zgc:162730	99	63.798	ENSCVAG00000018571	zgc:162730	79	62.908	Cyprinodon_variegatus
ENSGMOG00000017242	zgc:162730	100	35.511	ENSCVAG00000009207	sb:cb81	77	37.283	Cyprinodon_variegatus
ENSGMOG00000017242	zgc:162730	100	38.095	ENSDARG00000040503	sb:cb81	61	42.745	Danio_rerio
ENSGMOG00000017242	zgc:162730	80	57.308	ENSDARG00000103720	zgc:162730	74	54.924	Danio_rerio
ENSGMOG00000017242	zgc:162730	99	58.567	ENSELUG00000013158	zgc:162730	80	55.140	Esox_lucius
ENSGMOG00000017242	zgc:162730	100	38.576	ENSELUG00000013045	sb:cb81	76	35.843	Esox_lucius
ENSGMOG00000017242	zgc:162730	82	37.931	ENSELUG00000008675	zfp36l1b	62	37.453	Esox_lucius
ENSGMOG00000017242	zgc:162730	84	40.520	ENSELUG00000021506	zfp36l1a	64	39.560	Esox_lucius
ENSGMOG00000017242	zgc:162730	99	66.469	ENSFHEG00000013710	zgc:162730	79	66.172	Fundulus_heteroclitus
ENSGMOG00000017242	zgc:162730	80	40.364	ENSFHEG00000022187	sb:cb81	61	41.455	Fundulus_heteroclitus
ENSGMOG00000017242	zgc:162730	80	38.976	ENSGAFG00000018711	zfp36l1a	61	40.945	Gambusia_affinis
ENSGMOG00000017242	zgc:162730	100	38.291	ENSGAFG00000015700	sb:cb81	64	42.248	Gambusia_affinis
ENSGMOG00000017242	zgc:162730	99	65.579	ENSGAFG00000009953	zgc:162730	79	64.688	Gambusia_affinis
ENSGMOG00000017242	zgc:162730	100	35.088	ENSGACG00000013400	sb:cb81	94	35.860	Gasterosteus_aculeatus
ENSGMOG00000017242	zgc:162730	100	72.188	ENSGACG00000008351	zgc:162730	100	69.062	Gasterosteus_aculeatus
ENSGMOG00000017242	zgc:162730	84	39.286	ENSGAGG00000007315	ZFP36L1	71	37.184	Gopherus_agassizii
ENSGMOG00000017242	zgc:162730	100	62.090	ENSHBUG00000015057	zgc:162730	82	66.469	Haplochromis_burtoni
ENSGMOG00000017242	zgc:162730	80	39.427	ENSHBUG00000002383	sb:cb81	61	40.780	Haplochromis_burtoni
ENSGMOG00000017242	zgc:162730	68	34.842	ENSHCOG00000012747	zfp36l1b	91	32.579	Hippocampus_comes
ENSGMOG00000017242	zgc:162730	98	66.471	ENSHCOG00000015801	zgc:162730	79	66.176	Hippocampus_comes
ENSGMOG00000017242	zgc:162730	80	54.815	ENSIPUG00000018248	zgc:162730	80	47.432	Ictalurus_punctatus
ENSGMOG00000017242	zgc:162730	63	46.734	ENSIPUG00000011378	sb:cb81	60	42.063	Ictalurus_punctatus
ENSGMOG00000017242	zgc:162730	80	41.502	ENSKMAG00000013156	zfp36l1a	61	41.502	Kryptolebias_marmoratus
ENSGMOG00000017242	zgc:162730	100	63.717	ENSKMAG00000019277	zgc:162730	79	63.127	Kryptolebias_marmoratus
ENSGMOG00000017242	zgc:162730	100	37.059	ENSKMAG00000009884	sb:cb81	76	36.705	Kryptolebias_marmoratus
ENSGMOG00000017242	zgc:162730	100	66.862	ENSLBEG00000018380	zgc:162730	79	65.396	Labrus_bergylta
ENSGMOG00000017242	zgc:162730	80	43.511	ENSLACG00000015980	-	83	36.086	Latimeria_chalumnae
ENSGMOG00000017242	zgc:162730	80	42.146	ENSLACG00000015967	ZFP36L1	66	40.154	Latimeria_chalumnae
ENSGMOG00000017242	zgc:162730	100	39.412	ENSLACG00000015732	sb:cb81	67	42.205	Latimeria_chalumnae
ENSGMOG00000017242	zgc:162730	80	38.112	ENSLACG00000012879	-	68	38.356	Latimeria_chalumnae
ENSGMOG00000017242	zgc:162730	100	43.252	ENSLOCG00000014587	sb:cb81	76	39.755	Lepisosteus_oculatus
ENSGMOG00000017242	zgc:162730	80	41.569	ENSLOCG00000013957	zfp36l1a	62	39.689	Lepisosteus_oculatus
ENSGMOG00000017242	zgc:162730	99	54.711	ENSLOCG00000014597	zgc:162730	68	56.343	Lepisosteus_oculatus
ENSGMOG00000017242	zgc:162730	82	39.850	ENSMAMG00000000274	zfp36l1a	57	37.500	Mastacembelus_armatus
ENSGMOG00000017242	zgc:162730	80	41.155	ENSMAMG00000020144	sb:cb81	55	43.382	Mastacembelus_armatus
ENSGMOG00000017242	zgc:162730	100	64.244	ENSMAMG00000007516	zgc:162730	78	63.953	Mastacembelus_armatus
ENSGMOG00000017242	zgc:162730	80	39.209	ENSMZEG00005024684	sb:cb81	61	40.357	Maylandia_zebra
ENSGMOG00000017242	zgc:162730	100	64.465	ENSMZEG00005014415	zgc:162730	97	68.919	Maylandia_zebra
ENSGMOG00000017242	zgc:162730	80	38.989	ENSMZEG00005016001	-	61	40.357	Maylandia_zebra
ENSGMOG00000017242	zgc:162730	80	39.773	ENSMMOG00000010073	sb:cb81	66	43.019	Mola_mola
ENSGMOG00000017242	zgc:162730	72	74.561	ENSMMOG00000011506	zgc:162730	99	74.123	Mola_mola
ENSGMOG00000017242	zgc:162730	99	63.081	ENSMALG00000002348	zgc:162730	79	62.209	Monopterus_albus
ENSGMOG00000017242	zgc:162730	80	38.989	ENSNBRG00000006231	sb:cb81	65	40.357	Neolamprologus_brichardi
ENSGMOG00000017242	zgc:162730	100	62.090	ENSNBRG00000013701	zgc:162730	82	66.469	Neolamprologus_brichardi
ENSGMOG00000017242	zgc:162730	79	41.852	ENSONIG00000001259	sb:cb81	61	42.909	Oreochromis_niloticus
ENSGMOG00000017242	zgc:162730	85	65.455	ENSONIG00000005003	zgc:162730	95	61.801	Oreochromis_niloticus
ENSGMOG00000017242	zgc:162730	80	40.996	ENSORLG00000024026	sb:cb81	54	41.065	Oryzias_latipes
ENSGMOG00000017242	zgc:162730	99	58.735	ENSORLG00000027149	zgc:162730	79	59.940	Oryzias_latipes
ENSGMOG00000017242	zgc:162730	99	59.036	ENSORLG00020020289	zgc:162730	79	60.241	Oryzias_latipes_hni
ENSGMOG00000017242	zgc:162730	100	35.736	ENSORLG00020021084	sb:cb81	63	41.379	Oryzias_latipes_hni
ENSGMOG00000017242	zgc:162730	100	36.119	ENSORLG00015010105	sb:cb81	64	40.727	Oryzias_latipes_hsok
ENSGMOG00000017242	zgc:162730	99	58.559	ENSORLG00015001519	zgc:162730	79	60.060	Oryzias_latipes_hsok
ENSGMOG00000017242	zgc:162730	100	37.342	ENSOMEG00000020565	sb:cb81	63	40.755	Oryzias_melastigma
ENSGMOG00000017242	zgc:162730	99	61.818	ENSOMEG00000017752	zgc:162730	79	62.424	Oryzias_melastigma
ENSGMOG00000017242	zgc:162730	82	38.722	ENSPMGG00000009232	sb:cb81	67	39.648	Periophthalmus_magnuspinnatus
ENSGMOG00000017242	zgc:162730	100	39.241	ENSPFOG00000013806	sb:cb81	63	43.023	Poecilia_formosa
ENSGMOG00000017242	zgc:162730	99	68.868	ENSPFOG00000003665	zgc:162730	95	67.925	Poecilia_formosa
ENSGMOG00000017242	zgc:162730	100	39.557	ENSPLAG00000020158	sb:cb81	70	43.411	Poecilia_latipinna
ENSGMOG00000017242	zgc:162730	99	64.392	ENSPLAG00000000946	zgc:162730	79	64.985	Poecilia_latipinna
ENSGMOG00000017242	zgc:162730	100	39.241	ENSPMEG00000022425	sb:cb81	63	43.023	Poecilia_mexicana
ENSGMOG00000017242	zgc:162730	99	64.392	ENSPMEG00000000341	zgc:162730	79	64.985	Poecilia_mexicana
ENSGMOG00000017242	zgc:162730	80	39.147	ENSPREG00000013484	zfp36l1a	63	41.107	Poecilia_reticulata
ENSGMOG00000017242	zgc:162730	100	39.117	ENSPREG00000017495	sb:cb81	63	42.424	Poecilia_reticulata
ENSGMOG00000017242	zgc:162730	99	64.688	ENSPREG00000021263	zgc:162730	79	65.282	Poecilia_reticulata
ENSGMOG00000017242	zgc:162730	100	62.090	ENSPNYG00000015553	zgc:162730	82	66.469	Pundamilia_nyererei
ENSGMOG00000017242	zgc:162730	80	39.427	ENSPNYG00000007502	sb:cb81	65	40.780	Pundamilia_nyererei
ENSGMOG00000017242	zgc:162730	100	40.694	ENSPNAG00000030063	sb:cb81	76	40.694	Pygocentrus_nattereri
ENSGMOG00000017242	zgc:162730	80	55.731	ENSPNAG00000023018	zgc:162730	71	53.282	Pygocentrus_nattereri
ENSGMOG00000017242	zgc:162730	100	67.733	ENSSMAG00000018612	zgc:162730	79	67.733	Scophthalmus_maximus
ENSGMOG00000017242	zgc:162730	69	35.124	ENSSMAG00000004403	sb:cb81	94	35.124	Scophthalmus_maximus
ENSGMOG00000017242	zgc:162730	100	36.522	ENSSDUG00000004426	sb:cb81	75	36.705	Seriola_dumerili
ENSGMOG00000017242	zgc:162730	100	70.347	ENSSDUG00000002247	zgc:162730	80	67.919	Seriola_dumerili
ENSGMOG00000017242	zgc:162730	79	40.078	ENSSDUG00000001019	zfp36l1b	60	39.526	Seriola_dumerili
ENSGMOG00000017242	zgc:162730	78	38.732	ENSSDUG00000002237	zgc:114130	64	36.559	Seriola_dumerili
ENSGMOG00000017242	zgc:162730	100	70.662	ENSSLDG00000008502	zgc:162730	80	68.208	Seriola_lalandi_dorsalis
ENSGMOG00000017242	zgc:162730	100	36.812	ENSSLDG00000018035	sb:cb81	75	36.705	Seriola_lalandi_dorsalis
ENSGMOG00000017242	zgc:162730	79	41.339	ENSSLDG00000011048	zfp36l1b	61	39.764	Seriola_lalandi_dorsalis
ENSGMOG00000017242	zgc:162730	99	69.412	ENSSPAG00000006851	zgc:162730	79	69.118	Stegastes_partitus
ENSGMOG00000017242	zgc:162730	79	39.007	ENSSPAG00000006856	zgc:114130	64	38.571	Stegastes_partitus
ENSGMOG00000017242	zgc:162730	100	36.556	ENSTRUG00000020720	sb:cb81	63	40.152	Takifugu_rubripes
ENSGMOG00000017242	zgc:162730	80	41.245	ENSTRUG00000022418	zfp36l1	62	38.824	Takifugu_rubripes
ENSGMOG00000017242	zgc:162730	100	63.235	ENSTRUG00000021229	zgc:162730	79	62.647	Takifugu_rubripes
ENSGMOG00000017242	zgc:162730	100	38.486	ENSTNIG00000019802	sb:cb81	76	40.467	Tetraodon_nigroviridis
ENSGMOG00000017242	zgc:162730	83	63.121	ENSTNIG00000000183	zgc:162730	81	60.896	Tetraodon_nigroviridis
ENSGMOG00000017242	zgc:162730	70	37.333	ENSXCOG00000010688	sb:cb81	80	38.596	Xiphophorus_couchianus
ENSGMOG00000017242	zgc:162730	80	39.370	ENSXCOG00000001799	zfp36l1a	61	41.107	Xiphophorus_couchianus
ENSGMOG00000017242	zgc:162730	99	65.075	ENSXCOG00000012791	zgc:162730	79	64.179	Xiphophorus_couchianus
ENSGMOG00000017242	zgc:162730	99	65.373	ENSXMAG00000018206	zgc:162730	79	64.478	Xiphophorus_maculatus
ENSGMOG00000017242	zgc:162730	100	39.557	ENSXMAG00000004681	sb:cb81	63	43.411	Xiphophorus_maculatus
ENSGMOG00000017242	zgc:162730	80	39.370	ENSXMAG00000022234	zfp36l1a	61	41.107	Xiphophorus_maculatus