EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Description

Ensembl ID: ENSGMOG00000017295 (Gene tree)
Gene ID: -
Gene Symbol: GFI1 (1 of many)
Alias: GFI-1|GFI1A|ZNF163
Full Name: growth factor independent 1 transcriptional repressor
Gene Type: protein_coding
Species: Gadus_morhua
Status: putative
Strand: Plus strand
Length: 2164 bases
Position: chrGeneScaffold_4461:391082-393245
Accession: 4237
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSGMOP00000018587	zf-C2H2	PF00096.26	1.4e-26	1	5
ENSGMOP00000018587	zf-C2H2	PF00096.26	1.4e-26	2	5
ENSGMOP00000018587	zf-C2H2	PF00096.26	1.4e-26	3	5
ENSGMOP00000018587	zf-C2H2	PF00096.26	1.4e-26	4	5
ENSGMOP00000018587	zf-C2H2	PF00096.26	1.4e-26	5	5
ENSGMOP00000018587	zf-met	PF12874.7	8.9e-05	1	2
ENSGMOP00000018587	zf-met	PF12874.7	8.9e-05	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSGMOT00000019043	GFI1 (1 of many)-201	1185	-	ENSGMOP00000018587	394 (aa)	-	UPI00023F3BA0

Gene Model

Click here to download ENSGMOG00000017295's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSGMOG00000017295's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSGMOG00000017295	GFI1	51	41.727	ENSGMOG00000007875	ZNF319	98	39.474
ENSGMOG00000017295	GFI1	100	57.005	ENSGMOG00000007737	gfi1ab	100	56.763
ENSGMOG00000017295	GFI1	62	46.591	ENSGMOG00000006668	znf236	63	46.591
ENSGMOG00000017295	GFI1	56	35.252	ENSGMOG00000000127	-	71	34.899
ENSGMOG00000017295	GFI1	61	40.708	ENSGMOG00000000629	scrt1b	53	43.243