EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSGMOG00000017526 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Gadus_morhua
Status: putative
Strand: Plus strand
Length: 3327 bases
Position: chrGeneScaffold_3847:104422-107748
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSGMOP00000018835	zf-C2H2	PF00096.26	3.1e-54	1	9
ENSGMOP00000018835	zf-C2H2	PF00096.26	3.1e-54	2	9
ENSGMOP00000018835	zf-C2H2	PF00096.26	3.1e-54	3	9
ENSGMOP00000018835	zf-C2H2	PF00096.26	3.1e-54	4	9
ENSGMOP00000018835	zf-C2H2	PF00096.26	3.1e-54	5	9
ENSGMOP00000018835	zf-C2H2	PF00096.26	3.1e-54	6	9
ENSGMOP00000018835	zf-C2H2	PF00096.26	3.1e-54	7	9
ENSGMOP00000018835	zf-C2H2	PF00096.26	3.1e-54	8	9
ENSGMOP00000018835	zf-C2H2	PF00096.26	3.1e-54	9	9
ENSGMOP00000018835	zf-met	PF12874.7	3.2e-22	1	3
ENSGMOP00000018835	zf-met	PF12874.7	3.2e-22	2	3
ENSGMOP00000018835	zf-met	PF12874.7	3.2e-22	3	3

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSGMOT00000019293	-	1254	-	ENSGMOP00000018835	418 (aa)	-	UPI00023F3D11

Gene Model

Click here to download ENSGMOG00000017526's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSGMOG00000017526's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSGMOG00000017526	-	93	35.294	ENSGMOG00000016613	-	97	38.095
ENSGMOG00000017526	-	93	48.305	ENSGMOG00000020149	si:dkeyp-113d7.1	100	48.305
ENSGMOG00000017526	-	78	32.323	ENSGMOG00000000493	-	97	32.323
ENSGMOG00000017526	-	99	31.532	ENSGMOG00000005447	hinfp	62	31.532
ENSGMOG00000017526	-	98	37.931	ENSGMOG00000017815	snai1a	64	37.931
ENSGMOG00000017526	-	94	36.842	ENSGMOG00000016554	znf646	99	36.842
ENSGMOG00000017526	-	93	53.333	ENSGMOG00000003822	sall4	56	50.980
ENSGMOG00000017526	-	95	39.506	ENSGMOG00000002344	zbtb41	65	39.506
ENSGMOG00000017526	-	93	47.552	ENSGMOG00000005588	-	100	47.552
ENSGMOG00000017526	-	100	37.209	ENSGMOG00000018506	-	100	38.235
ENSGMOG00000017526	-	99	40.000	ENSGMOG00000009187	ZNF626	79	39.576
ENSGMOG00000017526	-	87	40.964	ENSGMOG00000020146	-	85	40.964
ENSGMOG00000017526	-	93	44.681	ENSGMOG00000003709	nktr	60	44.681
ENSGMOG00000017526	-	93	45.763	ENSGMOG00000012038	prdm5	100	43.269
ENSGMOG00000017526	-	93	41.748	ENSGMOG00000002669	snai2	55	41.748
ENSGMOG00000017526	-	100	41.919	ENSGMOG00000003238	-	100	35.294
ENSGMOG00000017526	-	93	42.857	ENSGMOG00000012990	-	100	42.857
ENSGMOG00000017526	-	93	47.500	ENSGMOG00000020024	-	100	47.500
ENSGMOG00000017526	-	94	36.913	ENSGMOG00000004242	znf319b	85	36.913
ENSGMOG00000017526	-	56	53.191	ENSGMOG00000002375	-	65	53.191
ENSGMOG00000017526	-	94	35.484	ENSGMOG00000017555	znf710b	80	35.484
ENSGMOG00000017526	-	95	48.000	ENSGMOG00000016007	-	85	48.000
ENSGMOG00000017526	-	93	34.562	ENSGMOG00000015258	ZNF384	53	34.909
ENSGMOG00000017526	-	97	39.560	ENSGMOG00000011409	e4f1	63	36.364
ENSGMOG00000017526	-	93	48.214	ENSGMOG00000007809	-	99	48.214
ENSGMOG00000017526	-	95	40.376	ENSGMOG00000011017	GZF1	51	40.376
ENSGMOG00000017526	-	96	33.125	ENSGMOG00000009850	-	99	32.597
ENSGMOG00000017526	-	98	44.444	ENSGMOG00000004315	-	95	44.444
ENSGMOG00000017526	-	93	44.444	ENSGMOG00000019123	gfi1b	63	44.444
ENSGMOG00000017526	-	95	33.913	ENSGMOG00000012893	si:ch211-216l23.1	88	34.483
ENSGMOG00000017526	-	96	47.761	ENSGMOG00000017518	-	66	47.761
ENSGMOG00000017526	-	95	30.124	ENSGMOG00000001062	patz1	55	31.056
ENSGMOG00000017526	-	95	34.390	ENSGMOG00000007875	ZNF319	99	34.390
ENSGMOG00000017526	-	95	35.967	ENSGMOG00000004063	ZNF628	99	42.342
ENSGMOG00000017526	-	94	35.606	ENSGMOG00000005137	znf526	67	35.606
ENSGMOG00000017526	-	94	35.200	ENSGMOG00000007538	znf366	66	35.200
ENSGMOG00000017526	-	93	33.071	ENSGMOG00000000629	scrt1b	53	38.462
ENSGMOG00000017526	-	94	45.872	ENSGMOG00000015143	-	64	45.872
ENSGMOG00000017526	-	99	35.465	ENSGMOG00000000127	-	66	35.465
ENSGMOG00000017526	-	94	45.570	ENSGMOG00000006668	znf236	71	41.667
ENSGMOG00000017526	-	94	33.333	ENSGMOG00000000494	-	97	33.333

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSGMOG00000017526	-	98	71.885	ENSAPOG00000002213	-	90	71.885	Acanthochromis_polyacanthus
ENSGMOG00000017526	-	95	69.481	ENSACIG00000013163	-	81	69.481	Amphilophus_citrinellus
ENSGMOG00000017526	-	94	41.781	ENSACIG00000013149	-	82	41.781	Amphilophus_citrinellus
ENSGMOG00000017526	-	97	71.885	ENSAOCG00000013124	-	90	71.885	Amphiprion_ocellaris
ENSGMOG00000017526	-	98	71.885	ENSAPEG00000009997	-	90	71.885	Amphiprion_percula
ENSGMOG00000017526	-	98	72.727	ENSATEG00000004127	-	99	70.627	Anabas_testudineus
ENSGMOG00000017526	-	97	72.524	ENSACLG00000005708	-	87	72.524	Astatotilapia_calliptera
ENSGMOG00000017526	-	93	77.976	ENSCVAG00000014734	-	98	58.333	Cyprinodon_variegatus
ENSGMOG00000017526	-	93	72.143	ENSFHEG00000014060	-	57	72.143	Fundulus_heteroclitus
ENSGMOG00000017526	-	94	71.429	ENSGAFG00000011174	-	89	71.429	Gambusia_affinis
ENSGMOG00000017526	-	97	79.596	ENSGACG00000019550	-	80	79.596	Gasterosteus_aculeatus
ENSGMOG00000017526	-	97	72.524	ENSHBUG00000006662	-	87	72.524	Haplochromis_burtoni
ENSGMOG00000017526	-	99	74.286	ENSHCOG00000003041	-	92	67.139	Hippocampus_comes
ENSGMOG00000017526	-	97	69.620	ENSKMAG00000009979	-	89	68.308	Kryptolebias_marmoratus
ENSGMOG00000017526	-	92	75.562	ENSLBEG00000010165	-	94	75.562	Labrus_bergylta
ENSGMOG00000017526	-	98	81.624	ENSMAMG00000006312	-	84	81.624	Mastacembelus_armatus
ENSGMOG00000017526	-	97	72.524	ENSMZEG00005013913	-	87	72.524	Maylandia_zebra
ENSGMOG00000017526	-	100	75.603	ENSMMOG00000011282	-	92	77.238	Mola_mola
ENSGMOG00000017526	-	98	68.580	ENSMALG00000000494	-	91	68.580	Monopterus_albus
ENSGMOG00000017526	-	97	58.276	ENSNBRG00000007602	-	83	47.701	Neolamprologus_brichardi
ENSGMOG00000017526	-	99	50.386	ENSONIG00000003856	-	100	51.554	Oreochromis_niloticus
ENSGMOG00000017526	-	97	75.843	ENSORLG00000010117	-	87	75.843	Oryzias_latipes
ENSGMOG00000017526	-	97	68.373	ENSORLG00020000219	-	87	68.373	Oryzias_latipes_hni
ENSGMOG00000017526	-	100	66.822	ENSORLG00015000258	-	98	63.158	Oryzias_latipes_hsok
ENSGMOG00000017526	-	94	75.881	ENSOMEG00000018262	-	89	73.649	Oryzias_melastigma
ENSGMOG00000017526	-	93	60.211	ENSPFOG00000013455	-	97	49.543	Poecilia_formosa
ENSGMOG00000017526	-	94	71.761	ENSPLAG00000004027	-	85	71.761	Poecilia_latipinna
ENSGMOG00000017526	-	94	71.761	ENSPMEG00000007589	-	89	71.761	Poecilia_mexicana
ENSGMOG00000017526	-	100	68.981	ENSPREG00000000153	-	94	71.389	Poecilia_reticulata
ENSGMOG00000017526	-	93	42.466	ENSPNYG00000007781	-	92	40.816	Pundamilia_nyererei
ENSGMOG00000017526	-	100	75.872	ENSPNYG00000007814	-	94	71.053	Pundamilia_nyererei
ENSGMOG00000017526	-	97	75.822	ENSSMAG00000021251	-	94	76.995	Scophthalmus_maximus
ENSGMOG00000017526	-	97	70.154	ENSSDUG00000013904	-	90	70.154	Seriola_dumerili
ENSGMOG00000017526	-	97	70.462	ENSSLDG00000006994	-	90	70.462	Seriola_lalandi_dorsalis
ENSGMOG00000017526	-	98	71.885	ENSSPAG00000011524	-	90	71.885	Stegastes_partitus
ENSGMOG00000017526	-	95	76.690	ENSTRUG00000015687	-	84	73.913	Takifugu_rubripes
ENSGMOG00000017526	-	98	74.306	ENSTNIG00000008242	-	99	74.306	Tetraodon_nigroviridis
ENSGMOG00000017526	-	94	67.273	ENSXCOG00000015947	-	96	57.416	Xiphophorus_couchianus
ENSGMOG00000017526	-	98	72.785	ENSXMAG00000023291	-	89	71.667	Xiphophorus_maculatus