EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSGMOG00000017726 (Gene tree)
Gene ID: -
Gene Symbol: rpusd4
Alias: si:ch211-14i3.3|zgc:92006
Full Name: RNA pseudouridine synthase D4
Gene Type: protein_coding
Species: Gadus_morhua
Status: putative
Strand: Minus strand
Length: 1961 bases
Position: chrGeneScaffold_169:1027589-1029549
Accession: ZDB-GENE-040801-238
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSGMOP00000019058	PseudoU_synth_2	PF00849.22	2.9e-27	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSGMOT00000019519	-	993	-	ENSGMOP00000019058	331 (aa)	-	UPI00023F3F55

Gene Model

Click here to download ENSGMOG00000017726's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSGMOG00000017726's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSGMOG00000017726	rpusd4	95	50.938	ENSG00000165526	RPUSD4	85	50.462	Homo_sapiens
ENSGMOG00000017726	rpusd4	97	64.417	ENSAPOG00000011024	rpusd4	81	65.217	Acanthochromis_polyacanthus
ENSGMOG00000017726	rpusd4	95	51.713	ENSAMEG00000000127	-	84	51.713	Ailuropoda_melanoleuca
ENSGMOG00000017726	rpusd4	65	54.737	ENSAMEG00000005953	-	92	54.737	Ailuropoda_melanoleuca
ENSGMOG00000017726	rpusd4	96	64.174	ENSACIG00000003533	rpusd4	94	64.375	Amphilophus_citrinellus
ENSGMOG00000017726	rpusd4	99	63.253	ENSAOCG00000015409	rpusd4	80	65.217	Amphiprion_ocellaris
ENSGMOG00000017726	rpusd4	99	62.952	ENSAPEG00000018935	rpusd4	80	64.907	Amphiprion_percula
ENSGMOG00000017726	rpusd4	98	62.918	ENSATEG00000008059	rpusd4	80	63.580	Anabas_testudineus
ENSGMOG00000017726	rpusd4	83	51.254	ENSAPLG00000013250	RPUSD4	99	50.169	Anas_platyrhynchos
ENSGMOG00000017726	rpusd4	97	49.390	ENSACAG00000000189	RPUSD4	89	49.390	Anolis_carolinensis
ENSGMOG00000017726	rpusd4	96	50.920	ENSANAG00000024050	RPUSD4	87	50.920	Aotus_nancymaae
ENSGMOG00000017726	rpusd4	99	63.174	ENSACLG00000020996	rpusd4	84	64.220	Astatotilapia_calliptera
ENSGMOG00000017726	rpusd4	96	55.521	ENSAMXG00000031479	rpusd4	92	55.521	Astyanax_mexicanus
ENSGMOG00000017726	rpusd4	99	49.405	ENSBTAG00000020900	RPUSD4	85	50.154	Bos_taurus
ENSGMOG00000017726	rpusd4	96	50.920	ENSCJAG00000042850	RPUSD4	81	50.920	Callithrix_jacchus
ENSGMOG00000017726	rpusd4	96	50.613	ENSCAFG00000010488	RPUSD4	85	51.227	Canis_familiaris
ENSGMOG00000017726	rpusd4	96	50.613	ENSCAFG00020010621	RPUSD4	85	51.227	Canis_lupus_dingo
ENSGMOG00000017726	rpusd4	96	50.462	ENSCHIG00000009975	RPUSD4	85	50.462	Capra_hircus
ENSGMOG00000017726	rpusd4	96	51.852	ENSTSYG00000008456	RPUSD4	85	51.852	Carlito_syrichta
ENSGMOG00000017726	rpusd4	72	48.319	ENSCAPG00000006040	RPUSD4	91	48.319	Cavia_aperea
ENSGMOG00000017726	rpusd4	96	51.852	ENSCPOG00000014971	RPUSD4	85	51.852	Cavia_porcellus
ENSGMOG00000017726	rpusd4	96	50.920	ENSCCAG00000027838	RPUSD4	87	50.920	Cebus_capucinus
ENSGMOG00000017726	rpusd4	96	49.538	ENSCATG00000041570	RPUSD4	85	49.538	Cercocebus_atys
ENSGMOG00000017726	rpusd4	96	52.454	ENSCLAG00000016553	RPUSD4	85	52.454	Chinchilla_lanigera
ENSGMOG00000017726	rpusd4	96	49.846	ENSCSAG00000002274	RPUSD4	85	49.846	Chlorocebus_sabaeus
ENSGMOG00000017726	rpusd4	81	50.185	ENSCHOG00000010249	RPUSD4	94	50.185	Choloepus_hoffmanni
ENSGMOG00000017726	rpusd4	85	51.568	ENSCPBG00000011175	RPUSD4	98	51.568	Chrysemys_picta_bellii
ENSGMOG00000017726	rpusd4	95	35.385	ENSCSAVG00000000872	-	62	35.385	Ciona_savignyi
ENSGMOG00000017726	rpusd4	96	49.846	ENSCANG00000039684	RPUSD4	84	50.313	Colobus_angolensis_palliatus
ENSGMOG00000017726	rpusd4	96	50.920	ENSCGRG00001024141	Rpusd4	85	50.920	Cricetulus_griseus_chok1gshd
ENSGMOG00000017726	rpusd4	96	50.920	ENSCGRG00000014415	Rpusd4	85	50.920	Cricetulus_griseus_crigri
ENSGMOG00000017726	rpusd4	52	57.386	ENSCSEG00000006462	-	78	57.386	Cynoglossus_semilaevis
ENSGMOG00000017726	rpusd4	99	63.174	ENSCVAG00000008761	rpusd4	84	63.914	Cyprinodon_variegatus
ENSGMOG00000017726	rpusd4	99	62.874	ENSCVAG00000000392	rpusd4	92	63.889	Cyprinodon_variegatus
ENSGMOG00000017726	rpusd4	96	55.901	ENSDARG00000012674	rpusd4	90	55.901	Danio_rerio
ENSGMOG00000017726	rpusd4	96	50.459	ENSDNOG00000020026	RPUSD4	86	50.459	Dasypus_novemcinctus
ENSGMOG00000017726	rpusd4	96	49.387	ENSDORG00000016717	Rpusd4	85	50.920	Dipodomys_ordii
ENSGMOG00000017726	rpusd4	96	50.617	ENSETEG00000013953	RPUSD4	86	50.617	Echinops_telfairi
ENSGMOG00000017726	rpusd4	99	50.147	ENSEASG00005022982	RPUSD4	85	50.920	Equus_asinus_asinus
ENSGMOG00000017726	rpusd4	99	50.442	ENSECAG00000000557	RPUSD4	85	51.227	Equus_caballus
ENSGMOG00000017726	rpusd4	76	53.672	ENSEEUG00000014036	RPUSD4	67	53.672	Erinaceus_europaeus
ENSGMOG00000017726	rpusd4	98	59.587	ENSELUG00000008075	rpusd4	87	60.843	Esox_lucius
ENSGMOG00000017726	rpusd4	89	52.174	ENSFCAG00000029789	RPUSD4	85	51.385	Felis_catus
ENSGMOG00000017726	rpusd4	97	50.000	ENSFALG00000005171	RPUSD4	96	50.000	Ficedula_albicollis
ENSGMOG00000017726	rpusd4	96	49.693	ENSFDAG00000014307	RPUSD4	86	49.693	Fukomys_damarensis
ENSGMOG00000017726	rpusd4	99	62.275	ENSFHEG00000004329	rpusd4	84	63.580	Fundulus_heteroclitus
ENSGMOG00000017726	rpusd4	83	53.405	ENSGALG00000024326	RPUSD4	86	50.641	Gallus_gallus
ENSGMOG00000017726	rpusd4	99	63.636	ENSGAFG00000021559	rpusd4	84	64.329	Gambusia_affinis
ENSGMOG00000017726	rpusd4	97	60.550	ENSGACG00000001657	rpusd4	96	63.273	Gasterosteus_aculeatus
ENSGMOG00000017726	rpusd4	97	50.154	ENSGAGG00000000132	RPUSD4	90	50.154	Gopherus_agassizii
ENSGMOG00000017726	rpusd4	95	50.938	ENSGGOG00000016494	RPUSD4	85	50.462	Gorilla_gorilla
ENSGMOG00000017726	rpusd4	99	63.174	ENSHBUG00000022838	rpusd4	84	64.220	Haplochromis_burtoni
ENSGMOG00000017726	rpusd4	96	51.070	ENSHGLG00000002285	RPUSD4	85	51.070	Heterocephalus_glaber_female
ENSGMOG00000017726	rpusd4	96	51.070	ENSHGLG00100006385	RPUSD4	85	51.070	Heterocephalus_glaber_male
ENSGMOG00000017726	rpusd4	99	63.253	ENSHCOG00000006612	rpusd4	83	64.000	Hippocampus_comes
ENSGMOG00000017726	rpusd4	98	57.751	ENSIPUG00000023879	rusd4	84	57.975	Ictalurus_punctatus
ENSGMOG00000017726	rpusd4	96	51.385	ENSSTOG00000025280	RPUSD4	88	51.385	Ictidomys_tridecemlineatus
ENSGMOG00000017726	rpusd4	96	51.235	ENSJJAG00000018673	Rpusd4	87	51.235	Jaculus_jaculus
ENSGMOG00000017726	rpusd4	97	60.061	ENSKMAG00000021805	rpusd4	84	60.185	Kryptolebias_marmoratus
ENSGMOG00000017726	rpusd4	97	63.110	ENSLBEG00000020394	rpusd4	92	62.997	Labrus_bergylta
ENSGMOG00000017726	rpusd4	96	50.156	ENSLACG00000011028	RPUSD4	81	50.156	Latimeria_chalumnae
ENSGMOG00000017726	rpusd4	96	42.508	ENSLOCG00000003124	rpusd4	86	42.508	Lepisosteus_oculatus
ENSGMOG00000017726	rpusd4	96	50.462	ENSLAFG00000005211	RPUSD4	100	43.197	Loxodonta_africana
ENSGMOG00000017726	rpusd4	96	49.846	ENSMFAG00000039513	RPUSD4	85	49.846	Macaca_fascicularis
ENSGMOG00000017726	rpusd4	96	50.154	ENSMMUG00000007933	RPUSD4	85	50.154	Macaca_mulatta
ENSGMOG00000017726	rpusd4	96	49.538	ENSMNEG00000027414	RPUSD4	85	49.538	Macaca_nemestrina
ENSGMOG00000017726	rpusd4	96	49.846	ENSMLEG00000042461	RPUSD4	85	49.846	Mandrillus_leucophaeus
ENSGMOG00000017726	rpusd4	99	63.501	ENSMAMG00000023839	rpusd4	85	64.220	Mastacembelus_armatus
ENSGMOG00000017726	rpusd4	99	63.174	ENSMZEG00005011999	rpusd4	84	64.220	Maylandia_zebra
ENSGMOG00000017726	rpusd4	82	51.439	ENSMGAG00000000840	RPUSD4	94	48.710	Meleagris_gallopavo
ENSGMOG00000017726	rpusd4	96	51.077	ENSMAUG00000010280	Rpusd4	85	51.077	Mesocricetus_auratus
ENSGMOG00000017726	rpusd4	96	50.769	ENSMICG00000015979	RPUSD4	89	51.667	Microcebus_murinus
ENSGMOG00000017726	rpusd4	96	49.387	ENSMOCG00000000661	Rpusd4	85	49.387	Microtus_ochrogaster
ENSGMOG00000017726	rpusd4	90	67.881	ENSMMOG00000021731	rpusd4	90	67.881	Mola_mola
ENSGMOG00000017726	rpusd4	92	52.564	ENSMODG00000004521	RPUSD4	79	52.564	Monodelphis_domestica
ENSGMOG00000017726	rpusd4	88	66.441	ENSMALG00000005839	rpusd4	95	64.444	Monopterus_albus
ENSGMOG00000017726	rpusd4	96	50.765	MGP_CAROLIEiJ_G0031954	Rpusd4	85	50.765	Mus_caroli
ENSGMOG00000017726	rpusd4	96	51.682	ENSMUSG00000032044	Rpusd4	85	51.682	Mus_musculus
ENSGMOG00000017726	rpusd4	96	51.070	MGP_PahariEiJ_G0014819	Rpusd4	85	51.070	Mus_pahari
ENSGMOG00000017726	rpusd4	96	51.682	MGP_SPRETEiJ_G0033078	Rpusd4	85	51.682	Mus_spretus
ENSGMOG00000017726	rpusd4	96	50.920	ENSMPUG00000006608	RPUSD4	85	50.920	Mustela_putorius_furo
ENSGMOG00000017726	rpusd4	73	52.479	ENSMLUG00000029348	-	94	52.479	Myotis_lucifugus
ENSGMOG00000017726	rpusd4	94	51.724	ENSMLUG00000017328	-	83	51.724	Myotis_lucifugus
ENSGMOG00000017726	rpusd4	96	51.070	ENSNGAG00000020847	Rpusd4	85	51.070	Nannospalax_galili
ENSGMOG00000017726	rpusd4	96	65.015	ENSNBRG00000005207	rpusd4	94	65.015	Neolamprologus_brichardi
ENSGMOG00000017726	rpusd4	96	49.538	ENSNLEG00000007465	RPUSD4	85	49.538	Nomascus_leucogenys
ENSGMOG00000017726	rpusd4	96	51.070	ENSMEUG00000004370	RPUSD4	87	51.070	Notamacropus_eugenii
ENSGMOG00000017726	rpusd4	96	50.613	ENSODEG00000004577	RPUSD4	85	50.613	Octodon_degus
ENSGMOG00000017726	rpusd4	99	64.371	ENSONIG00000018879	rpusd4	88	65.443	Oreochromis_niloticus
ENSGMOG00000017726	rpusd4	88	49.329	ENSOANG00000007247	RPUSD4	94	49.329	Ornithorhynchus_anatinus
ENSGMOG00000017726	rpusd4	96	51.070	ENSOCUG00000017039	RPUSD4	86	51.070	Oryctolagus_cuniculus
ENSGMOG00000017726	rpusd4	98	59.633	ENSORLG00000002750	rpusd4	89	60.188	Oryzias_latipes
ENSGMOG00000017726	rpusd4	99	59.517	ENSORLG00020002044	rpusd4	81	60.436	Oryzias_latipes_hni
ENSGMOG00000017726	rpusd4	99	59.337	ENSORLG00015020034	rpusd4	81	60.248	Oryzias_latipes_hsok
ENSGMOG00000017726	rpusd4	98	62.310	ENSOMEG00000004861	rpusd4	79	63.323	Oryzias_melastigma
ENSGMOG00000017726	rpusd4	95	51.250	ENSOGAG00000008922	RPUSD4	85	51.077	Otolemur_garnettii
ENSGMOG00000017726	rpusd4	96	50.462	ENSOARG00000012238	RPUSD4	85	50.462	Ovis_aries
ENSGMOG00000017726	rpusd4	95	50.938	ENSPPAG00000042883	RPUSD4	79	50.462	Pan_paniscus
ENSGMOG00000017726	rpusd4	96	51.227	ENSPPRG00000003081	RPUSD4	85	51.385	Panthera_pardus
ENSGMOG00000017726	rpusd4	96	51.227	ENSPTIG00000012059	RPUSD4	85	52.174	Panthera_tigris_altaica
ENSGMOG00000017726	rpusd4	95	50.938	ENSPTRG00000004454	RPUSD4	85	50.462	Pan_troglodytes
ENSGMOG00000017726	rpusd4	96	49.846	ENSPANG00000015040	RPUSD4	84	50.313	Papio_anubis
ENSGMOG00000017726	rpusd4	97	56.135	ENSPKIG00000023986	rpusd4	83	56.135	Paramormyrops_kingsleyae
ENSGMOG00000017726	rpusd4	89	51.171	ENSPSIG00000014268	RPUSD4	94	51.171	Pelodiscus_sinensis
ENSGMOG00000017726	rpusd4	98	61.818	ENSPMGG00000002806	rpusd4	91	62.037	Periophthalmus_magnuspinnatus
ENSGMOG00000017726	rpusd4	96	44.343	ENSPEMG00000000278	Rpusd4	85	44.479	Peromyscus_maniculatus_bairdii
ENSGMOG00000017726	rpusd4	89	40.729	ENSPMAG00000008183	rpusd4	95	40.729	Petromyzon_marinus
ENSGMOG00000017726	rpusd4	96	51.534	ENSPCIG00000010212	RPUSD4	88	51.534	Phascolarctos_cinereus
ENSGMOG00000017726	rpusd4	97	63.473	ENSPFOG00000019030	rpusd4	87	63.636	Poecilia_formosa
ENSGMOG00000017726	rpusd4	97	64.157	ENSPLAG00000016848	rpusd4	84	64.329	Poecilia_latipinna
ENSGMOG00000017726	rpusd4	97	63.554	ENSPMEG00000017534	rpusd4	84	63.444	Poecilia_mexicana
ENSGMOG00000017726	rpusd4	96	62.195	ENSPREG00000005689	rpusd4	84	62.346	Poecilia_reticulata
ENSGMOG00000017726	rpusd4	96	49.846	ENSPPYG00000004043	RPUSD4	85	49.846	Pongo_abelii
ENSGMOG00000017726	rpusd4	76	53.947	ENSPCAG00000000753	RPUSD4	68	53.947	Procavia_capensis
ENSGMOG00000017726	rpusd4	96	46.894	ENSPCOG00000020694	RPUSD4	85	46.894	Propithecus_coquereli
ENSGMOG00000017726	rpusd4	96	50.613	ENSPVAG00000000988	RPUSD4	86	50.613	Pteropus_vampyrus
ENSGMOG00000017726	rpusd4	99	63.174	ENSPNYG00000009652	rpusd4	84	64.220	Pundamilia_nyererei
ENSGMOG00000017726	rpusd4	96	58.307	ENSPNAG00000012264	rpusd4	85	58.307	Pygocentrus_nattereri
ENSGMOG00000017726	rpusd4	96	51.376	ENSRNOG00000011567	Rpusd4	85	51.376	Rattus_norvegicus
ENSGMOG00000017726	rpusd4	95	50.000	ENSRBIG00000034842	RPUSD4	85	49.538	Rhinopithecus_bieti
ENSGMOG00000017726	rpusd4	95	50.000	ENSRROG00000039753	RPUSD4	85	49.538	Rhinopithecus_roxellana
ENSGMOG00000017726	rpusd4	96	50.613	ENSSBOG00000030413	RPUSD4	87	50.613	Saimiri_boliviensis_boliviensis
ENSGMOG00000017726	rpusd4	89	52.685	ENSSHAG00000008304	RPUSD4	97	52.685	Sarcophilus_harrisii
ENSGMOG00000017726	rpusd4	100	54.227	ENSSFOG00015006203	rpusd4	89	54.848	Scleropages_formosus
ENSGMOG00000017726	rpusd4	97	66.463	ENSSMAG00000020978	rpusd4	84	67.085	Scophthalmus_maximus
ENSGMOG00000017726	rpusd4	97	63.497	ENSSDUG00000013399	rpusd4	84	64.669	Seriola_dumerili
ENSGMOG00000017726	rpusd4	97	63.497	ENSSLDG00000023507	rpusd4	84	64.669	Seriola_lalandi_dorsalis
ENSGMOG00000017726	rpusd4	89	51.839	ENSSPUG00000001401	RPUSD4	90	49.848	Sphenodon_punctatus
ENSGMOG00000017726	rpusd4	99	63.393	ENSSPAG00000012163	rpusd4	83	65.123	Stegastes_partitus
ENSGMOG00000017726	rpusd4	96	51.077	ENSSSCG00000015233	RPUSD4	85	51.077	Sus_scrofa
ENSGMOG00000017726	rpusd4	89	51.515	ENSTGUG00000000773	RPUSD4	99	51.515	Taeniopygia_guttata
ENSGMOG00000017726	rpusd4	98	59.202	ENSTRUG00000012283	rpusd4	84	59.259	Takifugu_rubripes
ENSGMOG00000017726	rpusd4	99	59.760	ENSTNIG00000014676	rpusd4	82	61.059	Tetraodon_nigroviridis
ENSGMOG00000017726	rpusd4	96	50.154	ENSTTRG00000001555	RPUSD4	85	50.154	Tursiops_truncatus
ENSGMOG00000017726	rpusd4	95	52.025	ENSUMAG00000002219	RPUSD4	84	52.025	Ursus_maritimus
ENSGMOG00000017726	rpusd4	68	47.598	ENSVPAG00000001066	RPUSD4	85	47.598	Vicugna_pacos
ENSGMOG00000017726	rpusd4	96	50.613	ENSVVUG00000020101	RPUSD4	85	51.227	Vulpes_vulpes
ENSGMOG00000017726	rpusd4	98	63.988	ENSXCOG00000004676	rpusd4	86	64.329	Xiphophorus_couchianus
ENSGMOG00000017726	rpusd4	98	64.583	ENSXMAG00000023351	rpusd4	84	64.939	Xiphophorus_maculatus