EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSGMOG00000017950 (Gene tree)
Gene ID: -
Gene Symbol: hnrnpa1a
Alias: zgc:66127
Full Name: heterogeneous nuclear ribonucleoprotein A1a
Gene Type: protein_coding
Species: Gadus_morhua
Status: putative
Strand: Plus strand
Length: 3591 bases
Position: chrGeneScaffold_1797:236783-240373
Accession: ZDB-GENE-040426-1546
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSGMOP00000019306	RRM_1	PF00076.22	9.3e-34	1	2
ENSGMOP00000019306	RRM_1	PF00076.22	9.3e-34	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSGMOT00000019774	-	1113	-	ENSGMOP00000019306	370 (aa)	-	UPI00023F3D89

Gene Model

Click here to download ENSGMOG00000017950's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSGMOG00000017950's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSGMOG00000017950	hnrnpa1a	50	40.541	ENSGMOG00000001006	MSI1	53	40.761

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSGMOG00000017950	hnrnpa1a	50	88.108	ENSAPOG00000019369	-	56	88.587	Acanthochromis_polyacanthus
ENSGMOG00000017950	hnrnpa1a	50	88.108	ENSAOCG00000005289	-	55	88.587	Amphiprion_ocellaris
ENSGMOG00000017950	hnrnpa1a	50	88.108	ENSAPEG00000004179	-	55	88.587	Amphiprion_percula
ENSGMOG00000017950	hnrnpa1a	50	85.946	ENSATEG00000022918	hnrnpa1a	86	86.413	Anabas_testudineus
ENSGMOG00000017950	hnrnpa1a	50	85.946	ENSCSEG00000007589	hnrnpa1a	68	86.413	Cynoglossus_semilaevis
ENSGMOG00000017950	hnrnpa1a	51	85.789	ENSELUG00000007372	-	51	86.957	Esox_lucius
ENSGMOG00000017950	hnrnpa1a	50	87.568	ENSGAFG00000007751	-	54	88.043	Gambusia_affinis
ENSGMOG00000017950	hnrnpa1a	50	83.243	ENSIPUG00000022440	-	73	82.249	Ictalurus_punctatus
ENSGMOG00000017950	hnrnpa1a	50	83.648	ENSIPUG00000002023	hnrnpa1a	70	83.696	Ictalurus_punctatus
ENSGMOG00000017950	hnrnpa1a	50	85.870	ENSLBEG00000010010	hnrnpa1a	53	86.413	Labrus_bergylta
ENSGMOG00000017950	hnrnpa1a	50	86.486	ENSMAMG00000007606	-	54	86.957	Mastacembelus_armatus
ENSGMOG00000017950	hnrnpa1a	50	85.946	ENSMMOG00000008251	hnrnpa1a	76	86.413	Mola_mola
ENSGMOG00000017950	hnrnpa1a	50	85.946	ENSMALG00000014091	hnrnpa1a	54	86.413	Monopterus_albus
ENSGMOG00000017950	hnrnpa1a	51	85.561	ENSPMGG00000011804	hnrnpa1a	68	86.957	Periophthalmus_magnuspinnatus
ENSGMOG00000017950	hnrnpa1a	50	87.568	ENSPFOG00000001825	-	54	88.043	Poecilia_formosa
ENSGMOG00000017950	hnrnpa1a	50	87.568	ENSPMEG00000002425	-	54	88.043	Poecilia_mexicana
ENSGMOG00000017950	hnrnpa1a	51	82.888	ENSPNAG00000007752	hnrnpa1a	75	82.888	Pygocentrus_nattereri
ENSGMOG00000017950	hnrnpa1a	50	87.027	ENSSDUG00000013908	hnrnpa1a	84	87.222	Seriola_dumerili
ENSGMOG00000017950	hnrnpa1a	50	87.027	ENSSLDG00000003718	hnrnpa1a	80	86.391	Seriola_lalandi_dorsalis
ENSGMOG00000017950	hnrnpa1a	50	87.568	ENSSPAG00000018518	-	62	88.043	Stegastes_partitus
ENSGMOG00000017950	hnrnpa1a	50	84.239	ENSTRUG00000020491	-	64	84.699	Takifugu_rubripes
ENSGMOG00000017950	hnrnpa1a	50	87.568	ENSXCOG00000009001	-	79	88.043	Xiphophorus_couchianus
ENSGMOG00000017950	hnrnpa1a	50	87.568	ENSXMAG00000008076	-	54	88.043	Xiphophorus_maculatus