EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSGMOG00000018161 (Gene tree)
Gene ID: -
Gene Symbol: SNRPN
Alias: HCERN3|PWCR|RT-LI|SM-D|SMN|SNRNP-N|SNURF-SNRPN
Full Name: small nuclear ribonucleoprotein polypeptide N
Gene Type: protein_coding
Species: Gadus_morhua
Status: putative
Strand: Minus strand
Length: 5549 bases
Position: chrGeneScaffold_531:5529-11077
Accession: 11164
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSGMOP00000019540	LSM	PF01423.22	3.9e-19	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSGMOT00000020017	SNRPN-201	675	-	ENSGMOP00000019540	225 (aa)	-	UPI00023F4116

Gene Model

Click here to download ENSGMOG00000018161's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSGMOG00000018161's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSGMOG00000018161	SNRPN	74	76.331	ENSG00000128739	SNRPN	100	96.610	Homo_sapiens
ENSGMOG00000018161	SNRPN	93	73.113	ENSAMEG00000007034	SNRPN	74	76.111	Ailuropoda_melanoleuca
ENSGMOG00000018161	SNRPN	74	76.190	ENSANAG00000034241	SNRPN	74	76.836	Aotus_nancymaae
ENSGMOG00000018161	SNRPN	93	75.587	ENSBTAG00000008251	SNRPN	78	75.145	Bos_taurus
ENSGMOG00000018161	SNRPN	74	76.190	ENSCJAG00000003759	-	74	76.836	Callithrix_jacchus
ENSGMOG00000018161	SNRPN	74	76.190	ENSCJAG00000042622	-	74	76.836	Callithrix_jacchus
ENSGMOG00000018161	SNRPN	93	73.239	ENSCAFG00000010127	SNRPN	75	76.243	Canis_familiaris
ENSGMOG00000018161	SNRPN	93	73.239	ENSCAFG00020024075	SNRPN	75	76.243	Canis_lupus_dingo
ENSGMOG00000018161	SNRPN	93	75.587	ENSCHIG00000017477	SNRPN	79	76.243	Capra_hircus
ENSGMOG00000018161	SNRPN	74	76.190	ENSTSYG00000005248	SNRPN	74	76.836	Carlito_syrichta
ENSGMOG00000018161	SNRPN	74	76.190	ENSCAPG00000003047	SNRPN	74	76.836	Cavia_aperea
ENSGMOG00000018161	SNRPN	74	76.190	ENSCPOG00000020270	SNRPN	74	76.836	Cavia_porcellus
ENSGMOG00000018161	SNRPN	74	76.190	ENSCCAG00000024231	SNRPN	74	76.836	Cebus_capucinus
ENSGMOG00000018161	SNRPN	74	76.190	ENSCATG00000032518	SNRPN	74	76.836	Cercocebus_atys
ENSGMOG00000018161	SNRPN	74	76.190	ENSCLAG00000011376	SNRPN	74	76.836	Chinchilla_lanigera
ENSGMOG00000018161	SNRPN	74	76.190	ENSCSAG00000006406	SNRPN	74	76.836	Chlorocebus_sabaeus
ENSGMOG00000018161	SNRPN	71	75.309	ENSCHOG00000001846	SNRPN	64	76.023	Choloepus_hoffmanni
ENSGMOG00000018161	SNRPN	74	76.190	ENSCANG00000041156	SNRPN	74	76.836	Colobus_angolensis_palliatus
ENSGMOG00000018161	SNRPN	74	75.595	ENSCGRG00001004136	Snrpn	74	76.271	Cricetulus_griseus_chok1gshd
ENSGMOG00000018161	SNRPN	74	76.190	ENSCGRG00000001621	Snrpn	74	76.836	Cricetulus_griseus_crigri
ENSGMOG00000018161	SNRPN	76	80.814	ENSCVAG00000014193	SNRPN	75	80.663	Cyprinodon_variegatus
ENSGMOG00000018161	SNRPN	73	76.048	ENSDNOG00000037060	SNRPN	72	76.705	Dasypus_novemcinctus
ENSGMOG00000018161	SNRPN	74	76.190	ENSDORG00000004527	Snrpn	74	76.836	Dipodomys_ordii
ENSGMOG00000018161	SNRPN	93	73.239	ENSEASG00005017871	SNRPN	75	76.243	Equus_asinus_asinus
ENSGMOG00000018161	SNRPN	93	73.239	ENSECAG00000018148	SNRPN	75	76.243	Equus_caballus
ENSGMOG00000018161	SNRPN	93	72.642	ENSEEUG00000007440	-	75	75.556	Erinaceus_europaeus
ENSGMOG00000018161	SNRPN	93	73.239	ENSFCAG00000022298	-	76	76.243	Felis_catus
ENSGMOG00000018161	SNRPN	74	76.190	ENSFDAG00000016578	-	74	76.836	Fukomys_damarensis
ENSGMOG00000018161	SNRPN	80	63.187	ENSFDAG00000010528	-	70	66.667	Fukomys_damarensis
ENSGMOG00000018161	SNRPN	74	76.190	ENSGGOG00000003988	SNRPN	74	76.836	Gorilla_gorilla
ENSGMOG00000018161	SNRPN	76	57.653	ENSHGLG00000020936	-	76	67.429	Heterocephalus_glaber_female
ENSGMOG00000018161	SNRPN	74	76.190	ENSHGLG00000011924	SNRPN	74	76.836	Heterocephalus_glaber_female
ENSGMOG00000018161	SNRPN	93	67.143	ENSHGLG00000019812	-	73	74.286	Heterocephalus_glaber_female
ENSGMOG00000018161	SNRPN	99	55.833	ENSHGLG00000002327	-	72	64.407	Heterocephalus_glaber_female
ENSGMOG00000018161	SNRPN	99	57.322	ENSHGLG00100004881	-	72	64.773	Heterocephalus_glaber_male
ENSGMOG00000018161	SNRPN	93	67.143	ENSHGLG00100021056	-	73	74.286	Heterocephalus_glaber_male
ENSGMOG00000018161	SNRPN	74	76.190	ENSHGLG00100016559	SNRPN	74	76.836	Heterocephalus_glaber_male
ENSGMOG00000018161	SNRPN	74	76.190	ENSSTOG00000001339	SNRPN	74	76.836	Ictidomys_tridecemlineatus
ENSGMOG00000018161	SNRPN	73	76.048	ENSLAFG00000009458	SNRPN	73	76.705	Loxodonta_africana
ENSGMOG00000018161	SNRPN	74	76.190	ENSMFAG00000042235	SNRPN	74	76.836	Macaca_fascicularis
ENSGMOG00000018161	SNRPN	74	76.190	ENSMMUG00000023139	SNURF	74	76.836	Macaca_mulatta
ENSGMOG00000018161	SNRPN	74	76.190	ENSMNEG00000031291	SNRPN	74	76.836	Macaca_nemestrina
ENSGMOG00000018161	SNRPN	74	76.190	ENSMLEG00000038837	SNRPN	74	76.836	Mandrillus_leucophaeus
ENSGMOG00000018161	SNRPN	74	76.190	ENSMAUG00000000051	Snrpn	77	76.836	Mesocricetus_auratus
ENSGMOG00000018161	SNRPN	74	76.190	ENSMICG00000042356	SNRPN	74	76.836	Microcebus_murinus
ENSGMOG00000018161	SNRPN	74	76.190	ENSMOCG00000015350	Snrpn	74	76.836	Microtus_ochrogaster
ENSGMOG00000018161	SNRPN	74	76.190	MGP_CAROLIEiJ_G0029815	Snrpn	74	76.836	Mus_caroli
ENSGMOG00000018161	SNRPN	74	76.190	ENSMUSG00000102252	Snrpn	74	76.836	Mus_musculus
ENSGMOG00000018161	SNRPN	74	76.190	MGP_PahariEiJ_G0013040	Snrpn	74	76.836	Mus_pahari
ENSGMOG00000018161	SNRPN	74	76.190	MGP_SPRETEiJ_G0030918	Snrpn	74	76.836	Mus_spretus
ENSGMOG00000018161	SNRPN	93	73.239	ENSMPUG00000014638	-	75	76.243	Mustela_putorius_furo
ENSGMOG00000018161	SNRPN	73	76.048	ENSMLUG00000023361	-	74	76.111	Myotis_lucifugus
ENSGMOG00000018161	SNRPN	74	76.190	ENSNGAG00000000181	Snrpn	74	76.836	Nannospalax_galili
ENSGMOG00000018161	SNRPN	100	78.947	ENSNLEG00000001376	SNRPN	95	78.947	Nomascus_leucogenys
ENSGMOG00000018161	SNRPN	74	75.595	ENSODEG00000019708	-	74	76.271	Octodon_degus
ENSGMOG00000018161	SNRPN	97	59.649	ENSODEG00000016065	-	78	67.630	Octodon_degus
ENSGMOG00000018161	SNRPN	74	76.190	ENSODEG00000013478	-	74	76.836	Octodon_degus
ENSGMOG00000018161	SNRPN	74	75.595	ENSODEG00000020110	-	74	76.271	Octodon_degus
ENSGMOG00000018161	SNRPN	93	73.364	ENSOCUG00000003532	-	73	76.836	Oryctolagus_cuniculus
ENSGMOG00000018161	SNRPN	79	82.022	ENSORLG00020007490	SNRPN	75	82.222	Oryzias_latipes_hni
ENSGMOG00000018161	SNRPN	79	82.022	ENSORLG00015003332	SNRPN	75	82.222	Oryzias_latipes_hsok
ENSGMOG00000018161	SNRPN	79	81.461	ENSOMEG00000002066	SNRPN	75	81.667	Oryzias_melastigma
ENSGMOG00000018161	SNRPN	74	76.190	ENSOGAG00000007392	SNRPN	74	76.836	Otolemur_garnettii
ENSGMOG00000018161	SNRPN	93	75.587	ENSOARG00000009080	SNRPN	75	76.243	Ovis_aries
ENSGMOG00000018161	SNRPN	97	52.968	ENSPPAG00000034049	-	73	54.237	Pan_paniscus
ENSGMOG00000018161	SNRPN	74	76.190	ENSPPAG00000027650	SNRPN	74	76.836	Pan_paniscus
ENSGMOG00000018161	SNRPN	90	51.471	ENSPPRG00000006957	-	77	50.314	Panthera_pardus
ENSGMOG00000018161	SNRPN	93	73.239	ENSPPRG00000019878	-	75	76.243	Panthera_pardus
ENSGMOG00000018161	SNRPN	74	76.190	ENSPTRG00000006826	SNRPN	74	76.836	Pan_troglodytes
ENSGMOG00000018161	SNRPN	97	53.425	ENSPTRG00000052400	-	73	54.802	Pan_troglodytes
ENSGMOG00000018161	SNRPN	74	76.190	ENSPANG00000020142	SNRPN	74	76.836	Papio_anubis
ENSGMOG00000018161	SNRPN	74	76.190	ENSPEMG00000012911	-	74	76.836	Peromyscus_maniculatus_bairdii
ENSGMOG00000018161	SNRPN	74	74.405	ENSPEMG00000020979	-	74	75.141	Peromyscus_maniculatus_bairdii
ENSGMOG00000018161	SNRPN	76	81.871	ENSPMEG00000020674	SNRPN	75	81.667	Poecilia_mexicana
ENSGMOG00000018161	SNRPN	74	76.190	ENSPPYG00000006269	SNURF	74	76.836	Pongo_abelii
ENSGMOG00000018161	SNRPN	74	76.190	ENSPCOG00000014231	SNRPN	74	76.836	Propithecus_coquereli
ENSGMOG00000018161	SNRPN	74	76.190	ENSRNOG00000059764	Snrpn	74	76.836	Rattus_norvegicus
ENSGMOG00000018161	SNRPN	74	76.190	ENSRBIG00000041765	SNRPN	74	76.836	Rhinopithecus_bieti
ENSGMOG00000018161	SNRPN	74	76.190	ENSRROG00000035157	SNRPN	74	76.836	Rhinopithecus_roxellana
ENSGMOG00000018161	SNRPN	93	75.117	ENSSBOG00000024929	-	75	75.691	Saimiri_boliviensis_boliviensis
ENSGMOG00000018161	SNRPN	74	76.190	ENSSBOG00000000110	-	74	76.836	Saimiri_boliviensis_boliviensis
ENSGMOG00000018161	SNRPN	99	83.260	ENSSARG00000000072	SNRPN	95	83.260	Sorex_araneus
ENSGMOG00000018161	SNRPN	93	73.239	ENSSSCG00000028124	SNRPN	78	76.243	Sus_scrofa
ENSGMOG00000018161	SNRPN	93	75.587	ENSTTRG00000010966	SNRPN	67	76.243	Tursiops_truncatus
ENSGMOG00000018161	SNRPN	91	72.464	ENSUAMG00000016284	SNRPN	61	74.286	Ursus_americanus
ENSGMOG00000018161	SNRPN	93	73.239	ENSUMAG00000025589	SNRPN	75	76.243	Ursus_maritimus
ENSGMOG00000018161	SNRPN	93	73.239	ENSVVUG00000017971	SNRPN	74	76.243	Vulpes_vulpes