EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSGMOG00000018475 (Gene tree)
Gene ID: -
Gene Symbol: RAB29
Alias: RAB7L|RAB7L1
Full Name: RAB29%2C member RAS oncogene family
Gene Type: protein_coding
Species: Gadus_morhua
Status: putative
Strand: Minus strand
Length: 1336 bases
Position: chrGeneScaffold_2013:207443-208778
Accession: 9789
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSGMOP00000019867	MMR_HSR1	PF01926.23	6.9e-05	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSGMOT00000020350	RAB29-201	498	-	ENSGMOP00000019867	166 (aa)	-	UPI00023F40D3

Gene Model

Click here to download ENSGMOG00000018475's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSGMOG00000018475's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSGMOG00000018475	RAB29	95	33.544	ENSGMOG00000004095	rab41	72	33.544
ENSGMOG00000018475	RAB29	98	33.951	ENSGMOG00000004979	-	73	33.951
ENSGMOG00000018475	RAB29	74	38.889	ENSGMOG00000014481	rab36	63	38.889
ENSGMOG00000018475	RAB29	60	33.333	ENSGMOG00000012623	si:ch73-116o1.2	83	32.895
ENSGMOG00000018475	RAB29	97	34.337	ENSGMOG00000004096	-	73	34.337
ENSGMOG00000018475	RAB29	93	32.051	ENSGMOG00000013490	arl8a	80	32.051
ENSGMOG00000018475	RAB29	95	37.107	ENSGMOG00000003610	rab15	72	37.107
ENSGMOG00000018475	RAB29	94	31.013	ENSGMOG00000007564	rhebl1	82	31.013
ENSGMOG00000018475	RAB29	96	38.365	ENSGMOG00000007712	RAB7A	76	38.365
ENSGMOG00000018475	RAB29	96	31.481	ENSGMOG00000006444	rab25b	92	31.481
ENSGMOG00000018475	RAB29	96	35.185	ENSGMOG00000008450	-	73	35.185
ENSGMOG00000018475	RAB29	96	35.404	ENSGMOG00000010808	RAB39B	74	35.404
ENSGMOG00000018475	RAB29	85	30.496	ENSGMOG00000018928	rabl2	68	30.496
ENSGMOG00000018475	RAB29	95	38.994	ENSGMOG00000011665	zgc:101559	73	38.994
ENSGMOG00000018475	RAB29	96	33.951	ENSGMOG00000003577	-	78	33.951
ENSGMOG00000018475	RAB29	98	35.928	ENSGMOG00000010022	-	78	35.928
ENSGMOG00000018475	RAB29	61	44.118	ENSGMOG00000015174	si:dkey-16l2.16	62	44.118
ENSGMOG00000018475	RAB29	73	34.426	ENSGMOG00000019073	-	56	34.426
ENSGMOG00000018475	RAB29	97	35.802	ENSGMOG00000008355	rab11a	72	35.802
ENSGMOG00000018475	RAB29	95	34.177	ENSGMOG00000015096	rab5c	69	34.177
ENSGMOG00000018475	RAB29	96	39.130	ENSGMOG00000017688	rab35b	77	39.130
ENSGMOG00000018475	RAB29	77	39.370	ENSGMOG00000018741	-	58	39.370
ENSGMOG00000018475	RAB29	97	36.420	ENSGMOG00000004888	rab1ab	79	36.420
ENSGMOG00000018475	RAB29	93	36.943	ENSGMOG00000000885	rab33ba	72	36.943
ENSGMOG00000018475	RAB29	92	34.641	ENSGMOG00000011766	-	94	34.641
ENSGMOG00000018475	RAB29	95	34.783	ENSGMOG00000017644	si:ch211-247i17.1	89	34.783
ENSGMOG00000018475	RAB29	96	40.625	ENSGMOG00000020148	-	83	40.625
ENSGMOG00000018475	RAB29	96	40.625	ENSGMOG00000020144	rab9a	78	40.625
ENSGMOG00000018475	RAB29	95	38.994	ENSGMOG00000016277	RAB15	72	38.994
ENSGMOG00000018475	RAB29	87	38.356	ENSGMOG00000005102	rab23	66	40.373
ENSGMOG00000018475	RAB29	95	33.544	ENSGMOG00000013070	rab22a	78	33.544
ENSGMOG00000018475	RAB29	95	34.810	ENSGMOG00000002868	rab5aa	70	34.810
ENSGMOG00000018475	RAB29	96	33.540	ENSGMOG00000006968	-	77	33.540
ENSGMOG00000018475	RAB29	92	34.416	ENSGMOG00000006175	rab33a	63	34.416
ENSGMOG00000018475	RAB29	96	34.783	ENSGMOG00000000532	-	72	34.783
ENSGMOG00000018475	RAB29	97	35.185	ENSGMOG00000007390	rab11ba	71	35.185
ENSGMOG00000018475	RAB29	72	36.975	ENSGMOG00000016608	rab18b	57	36.975
ENSGMOG00000018475	RAB29	75	36.641	ENSGMOG00000007140	rab34b	59	36.641
ENSGMOG00000018475	RAB29	93	33.333	ENSGMOG00000006450	rab11al	74	33.333
ENSGMOG00000018475	RAB29	95	33.962	ENSGMOG00000007127	RAB5A	83	33.962
ENSGMOG00000018475	RAB29	97	33.333	ENSGMOG00000009211	rab11bb	72	33.333
ENSGMOG00000018475	RAB29	97	34.568	ENSGMOG00000009668	-	72	34.568
ENSGMOG00000018475	RAB29	96	32.298	ENSGMOG00000001876	-	89	32.298
ENSGMOG00000018475	RAB29	96	39.130	ENSGMOG00000020194	rab9b	78	39.130
ENSGMOG00000018475	RAB29	96	34.161	ENSGMOG00000002552	rab30	76	34.161
ENSGMOG00000018475	RAB29	82	31.618	ENSGMOG00000002416	arl8bb	69	31.618
ENSGMOG00000018475	RAB29	96	36.025	ENSGMOG00000001834	rab4b	75	36.025
ENSGMOG00000018475	RAB29	96	38.365	ENSGMOG00000011308	-	76	38.365
ENSGMOG00000018475	RAB29	97	33.951	ENSGMOG00000012335	rab12	66	33.951
ENSGMOG00000018475	RAB29	97	34.161	ENSGMOG00000007293	rab1ba	77	34.161

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSGMOG00000018475	RAB29	99	78.049	ENSATEG00000024739	RAB29	80	78.049	Anabas_testudineus
ENSGMOG00000018475	RAB29	98	76.687	ENSACLG00000008602	RAB29	99	76.687	Astatotilapia_calliptera
ENSGMOG00000018475	RAB29	99	75.000	ENSCVAG00000014038	RAB29	80	75.000	Cyprinodon_variegatus
ENSGMOG00000018475	RAB29	99	57.317	ENSEBUG00000002259	RAB29	79	57.317	Eptatretus_burgeri
ENSGMOG00000018475	RAB29	98	72.222	ENSFHEG00000015993	RAB29	79	72.222	Fundulus_heteroclitus
ENSGMOG00000018475	RAB29	99	71.951	ENSGAFG00000000629	RAB29	80	71.951	Gambusia_affinis
ENSGMOG00000018475	RAB29	100	75.904	ENSGACG00000010473	RAB29	80	75.904	Gasterosteus_aculeatus
ENSGMOG00000018475	RAB29	99	76.220	ENSHBUG00000012594	RAB29	79	76.220	Haplochromis_burtoni
ENSGMOG00000018475	RAB29	99	69.512	ENSKMAG00000017150	-	74	69.512	Kryptolebias_marmoratus
ENSGMOG00000018475	RAB29	99	79.878	ENSLBEG00000018812	RAB29	85	79.878	Labrus_bergylta
ENSGMOG00000018475	RAB29	99	79.878	ENSLBEG00000006152	-	83	79.878	Labrus_bergylta
ENSGMOG00000018475	RAB29	98	62.963	ENSLACG00000002523	RAB29	79	62.963	Latimeria_chalumnae
ENSGMOG00000018475	RAB29	99	76.829	ENSMAMG00000006963	RAB29	80	76.829	Mastacembelus_armatus
ENSGMOG00000018475	RAB29	98	76.687	ENSMZEG00005026799	RAB29	79	76.687	Maylandia_zebra
ENSGMOG00000018475	RAB29	99	76.364	ENSMALG00000018436	RAB29	72	76.364	Monopterus_albus
ENSGMOG00000018475	RAB29	100	75.301	ENSNBRG00000008714	RAB29	73	75.301	Neolamprologus_brichardi
ENSGMOG00000018475	RAB29	99	76.829	ENSONIG00000014892	RAB29	79	76.829	Oreochromis_niloticus
ENSGMOG00000018475	RAB29	99	70.732	ENSORLG00000027892	RAB29	80	70.732	Oryzias_latipes
ENSGMOG00000018475	RAB29	99	68.902	ENSORLG00020005240	RAB29	80	68.902	Oryzias_latipes_hni
ENSGMOG00000018475	RAB29	99	69.512	ENSORLG00015020441	-	80	69.512	Oryzias_latipes_hsok
ENSGMOG00000018475	RAB29	99	73.780	ENSOMEG00000000336	RAB29	81	73.780	Oryzias_melastigma
ENSGMOG00000018475	RAB29	99	70.122	ENSPMGG00000008290	-	82	70.122	Periophthalmus_magnuspinnatus
ENSGMOG00000018475	RAB29	99	68.293	ENSPFOG00000013066	RAB29	79	68.293	Poecilia_formosa
ENSGMOG00000018475	RAB29	97	68.944	ENSPLAG00000002600	RAB29	76	68.944	Poecilia_latipinna
ENSGMOG00000018475	RAB29	99	69.512	ENSPMEG00000021807	RAB29	80	69.512	Poecilia_mexicana
ENSGMOG00000018475	RAB29	99	70.122	ENSPREG00000020276	RAB29	80	70.122	Poecilia_reticulata
ENSGMOG00000018475	RAB29	98	76.687	ENSPNYG00000015355	RAB29	79	76.687	Pundamilia_nyererei
ENSGMOG00000018475	RAB29	99	78.659	ENSSDUG00000006543	RAB29	82	78.659	Seriola_dumerili
ENSGMOG00000018475	RAB29	98	61.111	ENSSPUG00000015007	RAB29	79	61.111	Sphenodon_punctatus
ENSGMOG00000018475	RAB29	99	70.732	ENSSPAG00000002062	RAB29	80	70.732	Stegastes_partitus
ENSGMOG00000018475	RAB29	99	72.561	ENSXCOG00000016370	RAB29	80	72.561	Xiphophorus_couchianus
ENSGMOG00000018475	RAB29	99	73.171	ENSXMAG00000029823	RAB29	80	73.171	Xiphophorus_maculatus