EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSGMOG00000018506 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Gadus_morhua
Status: putative
Strand: Minus strand
Length: 10599 bases
Position: chrGeneScaffold_3443:19273-29871
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSGMOP00000019902	zf-C2H2	PF00096.26	1.3e-48	1	8
ENSGMOP00000019902	zf-C2H2	PF00096.26	1.3e-48	2	8
ENSGMOP00000019902	zf-C2H2	PF00096.26	1.3e-48	3	8
ENSGMOP00000019902	zf-C2H2	PF00096.26	1.3e-48	4	8
ENSGMOP00000019902	zf-C2H2	PF00096.26	1.3e-48	5	8
ENSGMOP00000019902	zf-C2H2	PF00096.26	1.3e-48	6	8
ENSGMOP00000019902	zf-C2H2	PF00096.26	1.3e-48	7	8
ENSGMOP00000019902	zf-C2H2	PF00096.26	1.3e-48	8	8
ENSGMOP00000019902	zf-met	PF12874.7	8.3e-10	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSGMOT00000020387	-	1101	-	ENSGMOP00000019902	367 (aa)	-	UPI00023F4136

Gene Model

Click here to download ENSGMOG00000018506's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSGMOG00000018506's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSGMOG00000018506	-	100	33.333	ENSGMOG00000007875	ZNF319	98	33.333
ENSGMOG00000018506	-	100	42.081	ENSGMOG00000009187	ZNF626	80	42.081
ENSGMOG00000018506	-	84	42.169	ENSGMOG00000017815	snai1a	58	42.169
ENSGMOG00000018506	-	99	45.833	ENSGMOG00000001062	patz1	59	45.833
ENSGMOG00000018506	-	90	43.662	ENSGMOG00000000127	-	80	43.662
ENSGMOG00000018506	-	99	51.852	ENSGMOG00000005588	-	100	51.852
ENSGMOG00000018506	-	100	53.521	ENSGMOG00000012990	-	100	41.912
ENSGMOG00000018506	-	100	35.417	ENSGMOG00000017555	znf710b	82	35.417
ENSGMOG00000018506	-	100	42.857	ENSGMOG00000004315	-	95	42.857
ENSGMOG00000018506	-	100	43.925	ENSGMOG00000020149	si:dkeyp-113d7.1	100	47.904
ENSGMOG00000018506	-	100	38.235	ENSGMOG00000017526	-	100	37.209
ENSGMOG00000018506	-	83	39.241	ENSGMOG00000002669	snai2	52	39.241
ENSGMOG00000018506	-	60	30.769	ENSGMOG00000005447	hinfp	56	30.769
ENSGMOG00000018506	-	100	48.077	ENSGMOG00000003709	nktr	66	48.077
ENSGMOG00000018506	-	99	35.500	ENSGMOG00000016613	-	97	40.000
ENSGMOG00000018506	-	84	51.250	ENSGMOG00000020024	-	100	51.250
ENSGMOG00000018506	-	100	33.533	ENSGMOG00000004063	ZNF628	100	39.506
ENSGMOG00000018506	-	100	46.250	ENSGMOG00000019123	gfi1b	64	46.250
ENSGMOG00000018506	-	100	41.333	ENSGMOG00000006668	znf236	70	41.333
ENSGMOG00000018506	-	100	37.324	ENSGMOG00000000494	-	97	37.324
ENSGMOG00000018506	-	100	31.169	ENSGMOG00000005137	znf526	61	31.169
ENSGMOG00000018506	-	62	38.333	ENSGMOG00000002375	-	89	38.983
ENSGMOG00000018506	-	84	57.500	ENSGMOG00000017518	-	64	57.500
ENSGMOG00000018506	-	100	33.750	ENSGMOG00000012893	si:ch211-216l23.1	72	33.750
ENSGMOG00000018506	-	83	44.872	ENSGMOG00000020146	-	86	44.872
ENSGMOG00000018506	-	100	33.735	ENSGMOG00000016554	znf646	99	32.663
ENSGMOG00000018506	-	100	32.609	ENSGMOG00000002344	zbtb41	64	32.609
ENSGMOG00000018506	-	86	40.244	ENSGMOG00000016007	-	76	40.244
ENSGMOG00000018506	-	100	31.858	ENSGMOG00000004242	znf319b	86	31.855
ENSGMOG00000018506	-	99	38.961	ENSGMOG00000000629	scrt1b	61	38.961
ENSGMOG00000018506	-	100	41.509	ENSGMOG00000007809	-	100	32.479
ENSGMOG00000018506	-	100	38.272	ENSGMOG00000012038	prdm5	100	38.272
ENSGMOG00000018506	-	100	39.394	ENSGMOG00000011409	e4f1	57	34.906
ENSGMOG00000018506	-	100	50.847	ENSGMOG00000003238	-	100	50.847
ENSGMOG00000018506	-	100	36.866	ENSGMOG00000015258	ZNF384	53	36.866
ENSGMOG00000018506	-	100	37.333	ENSGMOG00000007538	znf366	76	34.802

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSGMOG00000018506	-	100	46.988	ENSACAG00000008664	-	67	46.471	Anolis_carolinensis
ENSGMOG00000018506	-	100	38.692	ENSACAG00000024956	-	77	38.692	Anolis_carolinensis
ENSGMOG00000018506	-	100	41.048	ENSACAG00000024898	-	99	41.048	Anolis_carolinensis
ENSGMOG00000018506	-	100	48.913	ENSAMXG00000025452	-	99	42.800	Astyanax_mexicanus
ENSGMOG00000018506	-	100	47.872	ENSAMXG00000036233	-	81	47.872	Astyanax_mexicanus
ENSGMOG00000018506	-	100	39.405	ENSAMXG00000038325	-	96	40.726	Astyanax_mexicanus
ENSGMOG00000018506	-	100	41.525	ENSAMXG00000038636	-	97	41.525	Astyanax_mexicanus
ENSGMOG00000018506	-	100	53.571	ENSAMXG00000042784	-	96	53.571	Astyanax_mexicanus
ENSGMOG00000018506	-	100	41.129	ENSAMXG00000010805	-	98	41.129	Astyanax_mexicanus
ENSGMOG00000018506	-	100	38.542	ENSAMXG00000035246	-	69	38.542	Astyanax_mexicanus
ENSGMOG00000018506	-	100	38.965	ENSAMXG00000038536	-	84	38.965	Astyanax_mexicanus
ENSGMOG00000018506	-	100	46.729	ENSAMXG00000034344	-	84	46.729	Astyanax_mexicanus
ENSGMOG00000018506	-	100	43.373	ENSAMXG00000042746	-	84	37.808	Astyanax_mexicanus
ENSGMOG00000018506	-	100	48.315	ENSAMXG00000034847	-	85	48.315	Astyanax_mexicanus
ENSGMOG00000018506	-	100	45.000	ENSAMXG00000032841	-	76	45.000	Astyanax_mexicanus
ENSGMOG00000018506	-	100	41.818	ENSBTAG00000038322	-	85	41.818	Bos_taurus
ENSGMOG00000018506	-	99	38.095	ENSCPBG00000013652	-	67	38.521	Chrysemys_picta_bellii
ENSGMOG00000018506	-	100	36.131	ENSCPBG00000008580	-	81	36.131	Chrysemys_picta_bellii
ENSGMOG00000018506	-	100	41.909	ENSCPBG00000001526	-	90	41.909	Chrysemys_picta_bellii
ENSGMOG00000018506	-	100	50.000	ENSCSAVG00000010960	-	100	50.000	Ciona_savignyi
ENSGMOG00000018506	-	100	41.818	ENSDNOG00000047495	-	88	41.818	Dasypus_novemcinctus
ENSGMOG00000018506	-	99	39.071	ENSEBUG00000008306	-	79	46.667	Eptatretus_burgeri
ENSGMOG00000018506	-	100	39.648	ENSEBUG00000013875	-	94	39.648	Eptatretus_burgeri
ENSGMOG00000018506	-	100	53.571	ENSEBUG00000012919	-	79	53.571	Eptatretus_burgeri
ENSGMOG00000018506	-	98	46.154	ENSEBUG00000011435	-	80	39.891	Eptatretus_burgeri
ENSGMOG00000018506	-	100	36.927	ENSEBUG00000005264	-	77	36.927	Eptatretus_burgeri
ENSGMOG00000018506	-	100	34.028	ENSEBUG00000014717	-	71	34.028	Eptatretus_burgeri
ENSGMOG00000018506	-	100	47.500	ENSEBUG00000011694	-	95	47.500	Eptatretus_burgeri
ENSGMOG00000018506	-	100	40.404	ENSEBUG00000002075	-	78	39.782	Eptatretus_burgeri
ENSGMOG00000018506	-	100	32.708	ENSEBUG00000015837	-	78	32.708	Eptatretus_burgeri
ENSGMOG00000018506	-	100	39.648	ENSEASG00005004469	-	70	40.000	Equus_asinus_asinus
ENSGMOG00000018506	-	100	39.785	ENSGALG00000054325	-	97	39.785	Gallus_gallus
ENSGMOG00000018506	-	100	35.598	ENSGALG00000055127	-	66	35.598	Gallus_gallus
ENSGMOG00000018506	-	100	41.228	ENSGALG00000049609	-	55	42.105	Gallus_gallus
ENSGMOG00000018506	-	100	45.274	ENSGALG00000053507	-	78	45.274	Gallus_gallus
ENSGMOG00000018506	-	100	46.875	ENSGALG00000044069	-	69	38.843	Gallus_gallus
ENSGMOG00000018506	-	100	42.358	ENSGALG00000046336	-	99	45.122	Gallus_gallus
ENSGMOG00000018506	-	84	46.154	ENSGACG00000006283	-	96	46.154	Gasterosteus_aculeatus
ENSGMOG00000018506	-	100	44.737	ENSGAGG00000011366	-	94	44.737	Gopherus_agassizii
ENSGMOG00000018506	-	100	40.199	ENSGAGG00000018885	-	73	37.716	Gopherus_agassizii
ENSGMOG00000018506	-	100	42.771	ENSGAGG00000011399	-	91	42.857	Gopherus_agassizii
ENSGMOG00000018506	-	100	36.325	ENSHCOG00000018201	-	91	32.432	Hippocampus_comes
ENSGMOG00000018506	-	100	41.210	ENSIPUG00000021515	-	93	42.005	Ictalurus_punctatus
ENSGMOG00000018506	-	96	36.564	ENSIPUG00000012109	ZN12	51	36.564	Ictalurus_punctatus
ENSGMOG00000018506	-	100	47.085	ENSIPUG00000015468	-	92	41.011	Ictalurus_punctatus
ENSGMOG00000018506	-	99	35.088	ENSJJAG00000023633	Zfp672	90	40.964	Jaculus_jaculus
ENSGMOG00000018506	-	100	37.557	ENSLACG00000009005	-	100	37.557	Latimeria_chalumnae
ENSGMOG00000018506	-	100	32.537	ENSLACG00000005264	-	96	32.537	Latimeria_chalumnae
ENSGMOG00000018506	-	100	37.433	ENSLACG00000022211	-	76	37.330	Latimeria_chalumnae
ENSGMOG00000018506	-	100	42.683	ENSLOCG00000017864	-	99	42.683	Lepisosteus_oculatus
ENSGMOG00000018506	-	100	45.274	ENSMGAG00000013362	-	100	39.130	Meleagris_gallopavo
ENSGMOG00000018506	-	100	39.506	ENSMAUG00000009945	Zfp672	91	39.394	Mesocricetus_auratus
ENSGMOG00000018506	-	100	45.349	ENSMMOG00000003923	-	86	45.349	Mola_mola
ENSGMOG00000018506	-	100	36.712	ENSMODG00000001880	-	84	36.712	Monodelphis_domestica
ENSGMOG00000018506	-	100	35.326	ENSMODG00000010532	-	86	35.598	Monodelphis_domestica
ENSGMOG00000018506	-	100	41.667	MGP_CAROLIEiJ_G0030502	-	63	41.667	Mus_caroli
ENSGMOG00000018506	-	100	39.506	MGP_CAROLIEiJ_G0016391	Zfp672	93	51.220	Mus_caroli
ENSGMOG00000018506	-	100	39.506	ENSMUSG00000049755	Zfp672	100	40.000	Mus_musculus
ENSGMOG00000018506	-	100	39.506	ENSMUSG00000030823	9130019O22Rik	69	40.678	Mus_musculus
ENSGMOG00000018506	-	100	41.228	MGP_SPRETEiJ_G0031613	-	86	41.228	Mus_spretus
ENSGMOG00000018506	-	100	34.278	MGP_SPRETEiJ_G0017233	Zfp672	93	48.780	Mus_spretus
ENSGMOG00000018506	-	100	40.952	ENSNGAG00000015777	Zim1	69	46.012	Nannospalax_galili
ENSGMOG00000018506	-	100	35.277	ENSNBRG00000000708	-	93	35.985	Neolamprologus_brichardi
ENSGMOG00000018506	-	100	45.714	ENSORLG00020001922	-	74	43.956	Oryzias_latipes_hni
ENSGMOG00000018506	-	84	47.059	ENSOMEG00000001598	-	63	47.059	Oryzias_melastigma
ENSGMOG00000018506	-	100	44.059	ENSPSIG00000004502	-	54	44.059	Pelodiscus_sinensis
ENSGMOG00000018506	-	100	36.141	ENSPSIG00000012650	-	76	36.413	Pelodiscus_sinensis
ENSGMOG00000018506	-	100	43.125	ENSPSIG00000000672	-	90	43.125	Pelodiscus_sinensis
ENSGMOG00000018506	-	100	39.617	ENSPSIG00000015459	-	72	39.617	Pelodiscus_sinensis
ENSGMOG00000018506	-	100	42.012	ENSPSIG00000003152	-	82	36.486	Pelodiscus_sinensis
ENSGMOG00000018506	-	100	46.914	ENSPSIG00000006586	-	99	46.914	Pelodiscus_sinensis
ENSGMOG00000018506	-	100	42.786	ENSPSIG00000013021	-	77	39.860	Pelodiscus_sinensis
ENSGMOG00000018506	-	100	45.000	ENSPSIG00000010248	-	67	45.000	Pelodiscus_sinensis
ENSGMOG00000018506	-	100	44.737	ENSPSIG00000016380	-	72	37.500	Pelodiscus_sinensis
ENSGMOG00000018506	-	100	41.333	ENSPSIG00000010328	-	66	41.333	Pelodiscus_sinensis
ENSGMOG00000018506	-	100	42.544	ENSPSIG00000005672	-	64	42.544	Pelodiscus_sinensis
ENSGMOG00000018506	-	100	37.500	ENSPSIG00000005603	-	67	53.623	Pelodiscus_sinensis
ENSGMOG00000018506	-	100	43.537	ENSPSIG00000006790	-	89	43.537	Pelodiscus_sinensis
ENSGMOG00000018506	-	100	36.391	ENSPREG00000002642	-	92	36.391	Poecilia_reticulata
ENSGMOG00000018506	-	100	43.210	ENSPNYG00000015486	-	66	43.210	Pundamilia_nyererei
ENSGMOG00000018506	-	100	50.617	ENSPNAG00000000088	-	86	50.617	Pygocentrus_nattereri
ENSGMOG00000018506	-	100	50.000	ENSPNAG00000018395	-	61	50.000	Pygocentrus_nattereri
ENSGMOG00000018506	-	100	39.506	ENSRNOG00000002713	Zfp672	92	39.394	Rattus_norvegicus
ENSGMOG00000018506	-	100	34.615	ENSSHAG00000018106	-	75	36.559	Sarcophilus_harrisii
ENSGMOG00000018506	-	96	54.545	ENSSFOG00015019818	-	69	54.545	Scleropages_formosus
ENSGMOG00000018506	-	100	41.509	ENSSMAG00000004252	-	88	37.576	Scophthalmus_maximus
ENSGMOG00000018506	-	100	37.084	ENSSPUG00000010016	-	92	42.489	Sphenodon_punctatus
ENSGMOG00000018506	-	100	47.982	ENSSPUG00000004366	-	82	47.982	Sphenodon_punctatus
ENSGMOG00000018506	-	84	46.154	ENSSPAG00000021653	-	81	46.154	Stegastes_partitus
ENSGMOG00000018506	-	100	48.780	ENSTGUG00000018351	-	100	48.780	Taeniopygia_guttata
ENSGMOG00000018506	-	100	41.322	ENSTGUG00000015210	-	100	41.322	Taeniopygia_guttata
ENSGMOG00000018506	-	100	49.351	ENSTRUG00000022066	-	88	49.351	Takifugu_rubripes
ENSGMOG00000018506	-	100	37.719	ENSXETG00000031192	-	100	37.719	Xenopus_tropicalis
ENSGMOG00000018506	-	100	42.500	ENSXCOG00000006553	-	87	42.500	Xiphophorus_couchianus
ENSGMOG00000018506	-	99	41.935	ENSXMAG00000026680	-	82	41.935	Xiphophorus_maculatus