EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSGMOG00000018619 (Gene tree)
Gene ID: -
Gene Symbol: srrt
Alias: CHUNP6881|ars2|zgc:92060
Full Name: serrate RNA effector molecule homolog (Arabidopsis)
Gene Type: protein_coding
Species: Gadus_morhua
Status: putative
Strand: Plus strand
Length: 10966 bases
Position: chrGeneScaffold_4244:144259-155224
Accession: ZDB-GENE-020419-13
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSGMOP00000020030	ARS2	PF04959.13	1.5e-77	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSGMOT00000020522	-	2583	-	ENSGMOP00000020030	861 (aa)	-	UPI00023F3DBF

Gene Model

Click here to download ENSGMOG00000018619's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSGMOG00000018619's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSGMOG00000018619	srrt	65	62.870	ENSGMOG00000018694	-	72	62.585

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSGMOG00000018619	srrt	51	71.367	ENSG00000087087	SRRT	98	77.419	Homo_sapiens
ENSGMOG00000018619	srrt	93	72.401	ENSAPOG00000002304	srrt	96	76.241	Acanthochromis_polyacanthus
ENSGMOG00000018619	srrt	51	71.616	ENSAMEG00000014506	SRRT	95	61.156	Ailuropoda_melanoleuca
ENSGMOG00000018619	srrt	86	77.014	ENSACIG00000015795	srrt	90	81.319	Amphilophus_citrinellus
ENSGMOG00000018619	srrt	93	71.864	ENSAOCG00000009693	srrt	96	76.422	Amphiprion_ocellaris
ENSGMOG00000018619	srrt	92	51.348	ENSAOCG00000009189	-	95	54.388	Amphiprion_ocellaris
ENSGMOG00000018619	srrt	92	51.348	ENSAPEG00000020016	-	95	54.388	Amphiprion_percula
ENSGMOG00000018619	srrt	81	81.400	ENSAPEG00000003646	srrt	96	76.185	Amphiprion_percula
ENSGMOG00000018619	srrt	52	58.592	ENSATEG00000003652	-	86	61.373	Anabas_testudineus
ENSGMOG00000018619	srrt	93	73.519	ENSATEG00000014425	srrt	96	75.059	Anabas_testudineus
ENSGMOG00000018619	srrt	93	60.359	ENSACAG00000001014	SRRT	95	60.542	Anolis_carolinensis
ENSGMOG00000018619	srrt	51	70.299	ENSANAG00000031718	SRRT	95	60.436	Aotus_nancymaae
ENSGMOG00000018619	srrt	52	61.489	ENSACLG00000009423	-	96	52.661	Astatotilapia_calliptera
ENSGMOG00000018619	srrt	93	74.728	ENSACLG00000013156	srrt	92	75.891	Astatotilapia_calliptera
ENSGMOG00000018619	srrt	50	77.354	ENSAMXG00000016671	srrt	92	68.787	Astyanax_mexicanus
ENSGMOG00000018619	srrt	51	70.108	ENSBTAG00000001134	SRRT	95	61.655	Bos_taurus
ENSGMOG00000018619	srrt	62	44.737	WBGene00017085	E01A2.2	69	46.883	Caenorhabditis_elegans
ENSGMOG00000018619	srrt	51	69.462	ENSCJAG00000014917	SRRT	95	59.977	Callithrix_jacchus
ENSGMOG00000018619	srrt	96	60.599	ENSCAFG00000023538	SRRT	95	60.627	Canis_familiaris
ENSGMOG00000018619	srrt	98	59.954	ENSCAFG00020013358	SRRT	99	56.732	Canis_lupus_dingo
ENSGMOG00000018619	srrt	51	70.563	ENSCHIG00000010495	SRRT	95	61.888	Capra_hircus
ENSGMOG00000018619	srrt	96	59.510	ENSTSYG00000036426	SRRT	99	60.961	Carlito_syrichta
ENSGMOG00000018619	srrt	51	71.179	ENSCAPG00000013586	SRRT	100	60.956	Cavia_aperea
ENSGMOG00000018619	srrt	51	69.723	ENSCPOG00000001739	SRRT	95	60.460	Cavia_porcellus
ENSGMOG00000018619	srrt	51	70.299	ENSCCAG00000015877	SRRT	95	60.369	Cebus_capucinus
ENSGMOG00000018619	srrt	51	70.346	ENSCATG00000036306	SRRT	97	60.091	Cercocebus_atys
ENSGMOG00000018619	srrt	96	60.367	ENSCLAG00000007568	SRRT	95	60.414	Chinchilla_lanigera
ENSGMOG00000018619	srrt	51	70.299	ENSCSAG00000017996	SRRT	95	60.299	Chlorocebus_sabaeus
ENSGMOG00000018619	srrt	56	66.879	ENSCHOG00000007815	SRRT	67	66.879	Choloepus_hoffmanni
ENSGMOG00000018619	srrt	67	68.056	ENSCPBG00000011553	SRRT	83	63.004	Chrysemys_picta_bellii
ENSGMOG00000018619	srrt	100	40.409	ENSCING00000003506	-	54	49.359	Ciona_intestinalis
ENSGMOG00000018619	srrt	100	40.656	ENSCSAVG00000008394	-	89	54.755	Ciona_savignyi
ENSGMOG00000018619	srrt	51	70.538	ENSCANG00000034556	SRRT	95	60.046	Colobus_angolensis_palliatus
ENSGMOG00000018619	srrt	96	61.309	ENSCGRG00001001594	Srrt	95	60.529	Cricetulus_griseus_chok1gshd
ENSGMOG00000018619	srrt	96	56.243	ENSCGRG00000007292	Srrt	89	65.532	Cricetulus_griseus_crigri
ENSGMOG00000018619	srrt	51	60.390	ENSCSEG00000005233	-	54	60.613	Cynoglossus_semilaevis
ENSGMOG00000018619	srrt	98	68.519	ENSCSEG00000017878	srrt	95	68.009	Cynoglossus_semilaevis
ENSGMOG00000018619	srrt	93	74.607	ENSCVAG00000019848	srrt	96	76.128	Cyprinodon_variegatus
ENSGMOG00000018619	srrt	95	70.609	ENSDARG00000017762	srrt	95	69.708	Danio_rerio
ENSGMOG00000018619	srrt	51	70.299	ENSDNOG00000003851	SRRT	95	62.297	Dasypus_novemcinctus
ENSGMOG00000018619	srrt	51	70.716	ENSDORG00000005584	Srrt	95	61.782	Dipodomys_ordii
ENSGMOG00000018619	srrt	72	55.464	FBgn0033062	Ars2	69	49.781	Drosophila_melanogaster
ENSGMOG00000018619	srrt	73	68.288	ENSETEG00000016175	SRRT	71	67.653	Echinops_telfairi
ENSGMOG00000018619	srrt	74	54.019	ENSEBUG00000008517	-	86	56.077	Eptatretus_burgeri
ENSGMOG00000018619	srrt	51	70.299	ENSEASG00005016956	SRRT	95	62.065	Equus_asinus_asinus
ENSGMOG00000018619	srrt	51	70.299	ENSECAG00000012292	SRRT	95	62.181	Equus_caballus
ENSGMOG00000018619	srrt	81	67.173	ENSEEUG00000009117	SRRT	81	70.213	Erinaceus_europaeus
ENSGMOG00000018619	srrt	95	69.690	ENSELUG00000006651	srrt	50	75.274	Esox_lucius
ENSGMOG00000018619	srrt	52	62.397	ENSELUG00000021216	-	96	56.537	Esox_lucius
ENSGMOG00000018619	srrt	51	70.513	ENSFCAG00000006855	SRRT	95	60.859	Felis_catus
ENSGMOG00000018619	srrt	51	70.246	ENSFDAG00000021347	SRRT	95	59.977	Fukomys_damarensis
ENSGMOG00000018619	srrt	52	55.094	ENSFHEG00000004105	-	94	54.565	Fundulus_heteroclitus
ENSGMOG00000018619	srrt	74	79.167	ENSFHEG00000002756	srrt	90	81.569	Fundulus_heteroclitus
ENSGMOG00000018619	srrt	51	60.870	ENSGAFG00000020383	-	95	53.765	Gambusia_affinis
ENSGMOG00000018619	srrt	51	79.560	ENSGAFG00000005423	srrt	96	74.733	Gambusia_affinis
ENSGMOG00000018619	srrt	95	75.740	ENSGACG00000020387	srrt	95	76.686	Gasterosteus_aculeatus
ENSGMOG00000018619	srrt	92	51.020	ENSGACG00000001100	-	95	52.894	Gasterosteus_aculeatus
ENSGMOG00000018619	srrt	51	70.538	ENSGGOG00000001508	SRRT	96	60.184	Gorilla_gorilla
ENSGMOG00000018619	srrt	51	80.659	ENSHBUG00000002942	srrt	92	75.772	Haplochromis_burtoni
ENSGMOG00000018619	srrt	96	60.616	ENSHGLG00000008344	Srrt	95	62.357	Heterocephalus_glaber_female
ENSGMOG00000018619	srrt	96	61.653	ENSHGLG00100018857	Srrt	95	62.341	Heterocephalus_glaber_male
ENSGMOG00000018619	srrt	98	72.093	ENSHCOG00000005403	srrt	96	72.414	Hippocampus_comes
ENSGMOG00000018619	srrt	92	50.790	ENSHCOG00000008904	-	95	48.467	Hippocampus_comes
ENSGMOG00000018619	srrt	92	69.333	ENSIPUG00000021150	srrt	96	69.800	Ictalurus_punctatus
ENSGMOG00000018619	srrt	51	70.253	ENSSTOG00000013776	SRRT	95	60.393	Ictidomys_tridecemlineatus
ENSGMOG00000018619	srrt	96	60.714	ENSJJAG00000010446	Srrt	95	62.662	Jaculus_jaculus
ENSGMOG00000018619	srrt	51	61.474	ENSKMAG00000008468	-	96	53.846	Kryptolebias_marmoratus
ENSGMOG00000018619	srrt	93	70.303	ENSKMAG00000013599	srrt	96	73.263	Kryptolebias_marmoratus
ENSGMOG00000018619	srrt	98	71.511	ENSLBEG00000016308	srrt	87	80.610	Labrus_bergylta
ENSGMOG00000018619	srrt	93	53.039	ENSLACG00000001089	SRRT	95	54.726	Latimeria_chalumnae
ENSGMOG00000018619	srrt	90	59.129	ENSLOCG00000013658	srrt	89	65.845	Lepisosteus_oculatus
ENSGMOG00000018619	srrt	51	70.108	ENSLAFG00000007725	SRRT	95	60.686	Loxodonta_africana
ENSGMOG00000018619	srrt	51	70.538	ENSMFAG00000033745	SRRT	99	60.046	Macaca_fascicularis
ENSGMOG00000018619	srrt	96	60.091	ENSMMUG00000021255	SRRT	96	59.661	Macaca_mulatta
ENSGMOG00000018619	srrt	51	70.299	ENSMNEG00000041864	SRRT	97	60.046	Macaca_nemestrina
ENSGMOG00000018619	srrt	51	70.538	ENSMLEG00000029479	SRRT	98	60.046	Mandrillus_leucophaeus
ENSGMOG00000018619	srrt	52	62.473	ENSMAMG00000010681	-	95	54.798	Mastacembelus_armatus
ENSGMOG00000018619	srrt	51	80.921	ENSMAMG00000014311	srrt	96	74.435	Mastacembelus_armatus
ENSGMOG00000018619	srrt	52	61.702	ENSMZEG00005028002	-	96	52.775	Maylandia_zebra
ENSGMOG00000018619	srrt	51	80.879	ENSMZEG00005016135	srrt	92	76.010	Maylandia_zebra
ENSGMOG00000018619	srrt	51	69.892	ENSMAUG00000011386	Srrt	95	60.930	Mesocricetus_auratus
ENSGMOG00000018619	srrt	51	70.513	ENSMICG00000009471	SRRT	98	60.274	Microcebus_murinus
ENSGMOG00000018619	srrt	51	70.299	ENSMOCG00000001971	Srrt	95	62.485	Microtus_ochrogaster
ENSGMOG00000018619	srrt	95	73.583	ENSMMOG00000016399	srrt	95	72.989	Mola_mola
ENSGMOG00000018619	srrt	83	52.752	ENSMMOG00000011137	-	99	48.460	Mola_mola
ENSGMOG00000018619	srrt	51	67.949	ENSMODG00000004862	SRRT	89	67.308	Monodelphis_domestica
ENSGMOG00000018619	srrt	87	72.585	ENSMALG00000018604	srrt	99	69.784	Monopterus_albus
ENSGMOG00000018619	srrt	56	47.925	ENSMALG00000005567	-	84	49.669	Monopterus_albus
ENSGMOG00000018619	srrt	51	71.616	MGP_CAROLIEiJ_G0027870	Srrt	100	64.684	Mus_caroli
ENSGMOG00000018619	srrt	51	71.616	ENSMUSG00000037364	Srrt	99	64.684	Mus_musculus
ENSGMOG00000018619	srrt	51	71.429	MGP_PahariEiJ_G0024456	Srrt	100	64.684	Mus_pahari
ENSGMOG00000018619	srrt	51	71.616	MGP_SPRETEiJ_G0028875	Srrt	100	64.684	Mus_spretus
ENSGMOG00000018619	srrt	51	70.299	ENSMPUG00000015839	SRRT	95	60.465	Mustela_putorius_furo
ENSGMOG00000018619	srrt	51	70.299	ENSMLUG00000009975	SRRT	95	60.321	Myotis_lucifugus
ENSGMOG00000018619	srrt	51	70.299	ENSNGAG00000023715	Srrt	100	59.605	Nannospalax_galili
ENSGMOG00000018619	srrt	98	74.216	ENSNBRG00000019100	srrt	95	73.540	Neolamprologus_brichardi
ENSGMOG00000018619	srrt	82	61.504	ENSNLEG00000011987	SRRT	99	55.910	Nomascus_leucogenys
ENSGMOG00000018619	srrt	96	51.925	ENSMEUG00000011941	SRRT	94	51.962	Notamacropus_eugenii
ENSGMOG00000018619	srrt	60	65.865	ENSOPRG00000002502	-	67	69.697	Ochotona_princeps
ENSGMOG00000018619	srrt	51	71.397	ENSODEG00000016856	SRRT	95	60.885	Octodon_degus
ENSGMOG00000018619	srrt	92	52.313	ENSONIG00000016080	-	95	54.545	Oreochromis_niloticus
ENSGMOG00000018619	srrt	51	80.879	ENSONIG00000004242	srrt	96	73.812	Oreochromis_niloticus
ENSGMOG00000018619	srrt	98	74.040	ENSORLG00000008120	srrt	96	74.432	Oryzias_latipes
ENSGMOG00000018619	srrt	98	73.923	ENSORLG00020003058	srrt	96	73.955	Oryzias_latipes_hni
ENSGMOG00000018619	srrt	98	74.156	ENSORLG00015008062	srrt	96	74.313	Oryzias_latipes_hsok
ENSGMOG00000018619	srrt	98	74.592	ENSOMEG00000003155	srrt	90	82.040	Oryzias_melastigma
ENSGMOG00000018619	srrt	92	54.745	ENSOMEG00000006963	-	95	55.817	Oryzias_melastigma
ENSGMOG00000018619	srrt	51	70.299	ENSOGAG00000017242	SRRT	95	60.529	Otolemur_garnettii
ENSGMOG00000018619	srrt	51	70.346	ENSOARG00000015645	SRRT	95	61.520	Ovis_aries
ENSGMOG00000018619	srrt	51	70.538	ENSPPAG00000041090	SRRT	97	58.295	Pan_paniscus
ENSGMOG00000018619	srrt	51	70.779	ENSPPRG00000009557	SRRT	95	61.305	Panthera_pardus
ENSGMOG00000018619	srrt	51	70.513	ENSPTIG00000014355	SRRT	95	60.743	Panthera_tigris_altaica
ENSGMOG00000018619	srrt	51	70.538	ENSPTRG00000019511	SRRT	99	58.009	Pan_troglodytes
ENSGMOG00000018619	srrt	51	69.118	ENSPANG00000020763	SRRT	97	60.023	Papio_anubis
ENSGMOG00000018619	srrt	98	66.129	ENSPKIG00000005434	srrt	95	70.116	Paramormyrops_kingsleyae
ENSGMOG00000018619	srrt	93	66.226	ENSPKIG00000022212	-	96	66.784	Paramormyrops_kingsleyae
ENSGMOG00000018619	srrt	51	71.965	ENSPSIG00000016311	SRRT	96	60.910	Pelodiscus_sinensis
ENSGMOG00000018619	srrt	85	78.959	ENSPMGG00000002841	srrt	95	70.686	Periophthalmus_magnuspinnatus
ENSGMOG00000018619	srrt	51	71.616	ENSPEMG00000010834	Srrt	95	61.021	Peromyscus_maniculatus_bairdii
ENSGMOG00000018619	srrt	96	51.211	ENSPMAG00000009614	-	55	60.171	Petromyzon_marinus
ENSGMOG00000018619	srrt	51	69.444	ENSPCIG00000000816	SRRT	95	59.543	Phascolarctos_cinereus
ENSGMOG00000018619	srrt	51	62.690	ENSPFOG00000016554	-	95	53.169	Poecilia_formosa
ENSGMOG00000018619	srrt	51	79.386	ENSPFOG00000005704	srrt	96	74.763	Poecilia_formosa
ENSGMOG00000018619	srrt	51	61.739	ENSPLAG00000004526	-	95	52.996	Poecilia_latipinna
ENSGMOG00000018619	srrt	93	72.662	ENSPLAG00000021992	srrt	96	73.498	Poecilia_latipinna
ENSGMOG00000018619	srrt	74	78.913	ENSPMEG00000001182	srrt	96	74.882	Poecilia_mexicana
ENSGMOG00000018619	srrt	93	73.398	ENSPREG00000022308	srrt	96	74.526	Poecilia_reticulata
ENSGMOG00000018619	srrt	51	68.076	ENSPCAG00000001621	SRRT	95	60.205	Procavia_capensis
ENSGMOG00000018619	srrt	51	70.538	ENSPCOG00000025751	SRRT	95	60.414	Propithecus_coquereli
ENSGMOG00000018619	srrt	63	62.607	ENSPVAG00000000834	SRRT	100	52.975	Pteropus_vampyrus
ENSGMOG00000018619	srrt	51	80.879	ENSPNYG00000018710	srrt	96	75.891	Pundamilia_nyererei
ENSGMOG00000018619	srrt	95	53.551	ENSPNAG00000010629	srrt	95	55.220	Pygocentrus_nattereri
ENSGMOG00000018619	srrt	51	61.605	ENSRNOG00000048277	AABR07035787.1	92	60.304	Rattus_norvegicus
ENSGMOG00000018619	srrt	51	70.299	ENSRBIG00000035718	SRRT	97	60.046	Rhinopithecus_bieti
ENSGMOG00000018619	srrt	51	70.299	ENSRROG00000030622	SRRT	98	60.046	Rhinopithecus_roxellana
ENSGMOG00000018619	srrt	51	70.538	ENSSBOG00000033570	SRRT	96	60.069	Saimiri_boliviensis_boliviensis
ENSGMOG00000018619	srrt	52	67.894	ENSSHAG00000007349	-	99	56.119	Sarcophilus_harrisii
ENSGMOG00000018619	srrt	93	70.384	ENSSFOG00015017293	srrt	95	71.915	Scleropages_formosus
ENSGMOG00000018619	srrt	51	59.275	ENSSMAG00000018195	-	95	51.522	Scophthalmus_maximus
ENSGMOG00000018619	srrt	93	75.152	ENSSMAG00000015342	srrt	96	75.357	Scophthalmus_maximus
ENSGMOG00000018619	srrt	93	74.909	ENSSDUG00000012049	srrt	95	75.476	Seriola_dumerili
ENSGMOG00000018619	srrt	51	54.466	ENSSDUG00000002051	-	94	53.173	Seriola_dumerili
ENSGMOG00000018619	srrt	93	71.913	ENSSLDG00000017477	srrt	91	79.381	Seriola_lalandi_dorsalis
ENSGMOG00000018619	srrt	93	75.240	ENSSPAG00000005665	srrt	94	76.505	Stegastes_partitus
ENSGMOG00000018619	srrt	51	55.000	ENSSPAG00000018943	-	93	54.860	Stegastes_partitus
ENSGMOG00000018619	srrt	98	73.218	ENSTRUG00000016075	srrt	96	74.175	Takifugu_rubripes
ENSGMOG00000018619	srrt	90	51.372	ENSTRUG00000000023	-	94	52.892	Takifugu_rubripes
ENSGMOG00000018619	srrt	92	51.449	ENSTNIG00000003111	-	95	53.613	Tetraodon_nigroviridis
ENSGMOG00000018619	srrt	74	67.718	ENSTNIG00000011779	srrt	100	67.868	Tetraodon_nigroviridis
ENSGMOG00000018619	srrt	59	74.790	ENSTBEG00000005212	SRRT	56	75.504	Tupaia_belangeri
ENSGMOG00000018619	srrt	51	70.108	ENSTTRG00000011104	SRRT	96	60.321	Tursiops_truncatus
ENSGMOG00000018619	srrt	51	70.299	ENSUAMG00000027997	SRRT	99	60.718	Ursus_americanus
ENSGMOG00000018619	srrt	51	70.299	ENSUMAG00000011295	SRRT	95	60.859	Ursus_maritimus
ENSGMOG00000018619	srrt	96	60.599	ENSVVUG00000023572	SRRT	95	60.627	Vulpes_vulpes
ENSGMOG00000018619	srrt	71	69.780	ENSXETG00000025124	srrt	95	51.142	Xenopus_tropicalis
ENSGMOG00000018619	srrt	51	53.587	ENSXCOG00000013105	-	91	50.547	Xiphophorus_couchianus
ENSGMOG00000018619	srrt	80	79.921	ENSXMAG00000007627	srrt	96	74.733	Xiphophorus_maculatus
ENSGMOG00000018619	srrt	92	51.699	ENSXMAG00000002090	-	95	53.066	Xiphophorus_maculatus