EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSGMOG00000018718 (Gene tree)
Gene ID: -
Gene Symbol: zbtb18
Alias: si:ch211-221n23.1|znf238
Full Name: zinc finger and BTB domain containing 18
Gene Type: protein_coding
Species: Gadus_morhua
Status: putative
Strand: Minus strand
Length: 4337 bases
Position: chrGeneScaffold_1514:7646-11982
Accession: ZDB-GENE-050419-73
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSGMOP00000020107	zf-C2H2	PF00096.26	4.5e-13	1	3
ENSGMOP00000020107	zf-C2H2	PF00096.26	4.5e-13	2	3
ENSGMOP00000020107	zf-C2H2	PF00096.26	4.5e-13	3	3
ENSGMOP00000020107	zf-met	PF12874.7	1.8e-06	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSGMOT00000020605	-	1713	-	ENSGMOP00000020107	570 (aa)	-	UPI00023F4288

Gene Model

Click here to download ENSGMOG00000018718's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSGMOG00000018718's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSGMOG00000018718	zbtb18	50	34.783	ENSGMOG00000007667	znf131	59	36.220

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSGMOG00000018718	zbtb18	60	91.282	ENSAPOG00000005168	zbtb18	57	91.971	Acanthochromis_polyacanthus
ENSGMOG00000018718	zbtb18	59	91.282	ENSACIG00000008655	zbtb18	63	95.420	Amphilophus_citrinellus
ENSGMOG00000018718	zbtb18	60	91.282	ENSAOCG00000014105	zbtb18	55	95.420	Amphiprion_ocellaris
ENSGMOG00000018718	zbtb18	60	90.769	ENSATEG00000010192	zbtb18	57	91.971	Anabas_testudineus
ENSGMOG00000018718	zbtb18	59	91.795	ENSACLG00000022978	zbtb18	55	95.420	Astatotilapia_calliptera
ENSGMOG00000018718	zbtb18	59	87.413	ENSAMXG00000042119	zbtb18	59	92.366	Astyanax_mexicanus
ENSGMOG00000018718	zbtb18	59	92.254	ENSCSEG00000003083	zbtb18	55	96.183	Cynoglossus_semilaevis
ENSGMOG00000018718	zbtb18	59	90.845	ENSCVAG00000016785	zbtb18	56	94.656	Cyprinodon_variegatus
ENSGMOG00000018718	zbtb18	57	89.474	ENSDARG00000028228	zbtb18	59	93.651	Danio_rerio
ENSGMOG00000018718	zbtb18	59	90.206	ENSELUG00000013471	zbtb18	59	92.366	Esox_lucius
ENSGMOG00000018718	zbtb18	59	91.549	ENSFHEG00000020005	zbtb18	56	95.420	Fundulus_heteroclitus
ENSGMOG00000018718	zbtb18	58	91.192	ENSGAFG00000000619	zbtb18	56	94.656	Gambusia_affinis
ENSGMOG00000018718	zbtb18	60	90.769	ENSGACG00000010518	zbtb18	59	91.237	Gasterosteus_aculeatus
ENSGMOG00000018718	zbtb18	60	91.795	ENSHBUG00000013654	zbtb18	57	92.268	Haplochromis_burtoni
ENSGMOG00000018718	zbtb18	56	88.636	ENSIPUG00000008912	zbtb18	61	93.130	Ictalurus_punctatus
ENSGMOG00000018718	zbtb18	59	92.254	ENSKMAG00000002780	zbtb18	56	96.183	Kryptolebias_marmoratus
ENSGMOG00000018718	zbtb18	60	90.256	ENSLBEG00000014796	zbtb18	57	90.511	Labrus_bergylta
ENSGMOG00000018718	zbtb18	60	90.256	ENSMAMG00000021720	zbtb18	57	91.971	Mastacembelus_armatus
ENSGMOG00000018718	zbtb18	60	91.795	ENSMZEG00005027394	zbtb18	55	95.420	Maylandia_zebra
ENSGMOG00000018718	zbtb18	51	89.167	ENSMGAG00000015389	-	62	89.167	Meleagris_gallopavo
ENSGMOG00000018718	zbtb18	58	91.795	ENSMMOG00000007888	zbtb18	62	96.063	Mola_mola
ENSGMOG00000018718	zbtb18	60	90.256	ENSMALG00000000725	zbtb18	58	91.971	Monopterus_albus
ENSGMOG00000018718	zbtb18	58	91.795	ENSNBRG00000013796	zbtb18	56	95.238	Neolamprologus_brichardi
ENSGMOG00000018718	zbtb18	60	91.282	ENSONIG00000000862	zbtb18	57	91.971	Oreochromis_niloticus
ENSGMOG00000018718	zbtb18	59	90.780	ENSORLG00000027425	zbtb18	56	95.420	Oryzias_latipes
ENSGMOG00000018718	zbtb18	59	90.780	ENSORLG00020011988	zbtb18	56	95.420	Oryzias_latipes_hni
ENSGMOG00000018718	zbtb18	59	90.780	ENSORLG00015017457	zbtb18	56	95.420	Oryzias_latipes_hsok
ENSGMOG00000018718	zbtb18	59	90.816	ENSOMEG00000011249	zbtb18	56	95.420	Oryzias_melastigma
ENSGMOG00000018718	zbtb18	59	88.652	ENSPKIG00000021964	zbtb18	56	93.130	Paramormyrops_kingsleyae
ENSGMOG00000018718	zbtb18	56	90.164	ENSPKIG00000008787	-	62	90.164	Paramormyrops_kingsleyae
ENSGMOG00000018718	zbtb18	58	89.855	ENSPMGG00000008020	zbtb18	62	95.238	Periophthalmus_magnuspinnatus
ENSGMOG00000018718	zbtb18	57	90.526	ENSPFOG00000022080	zbtb18	56	94.444	Poecilia_formosa
ENSGMOG00000018718	zbtb18	58	91.192	ENSPLAG00000020960	zbtb18	61	94.444	Poecilia_latipinna
ENSGMOG00000018718	zbtb18	58	91.192	ENSPLAG00000011299	-	61	94.444	Poecilia_latipinna
ENSGMOG00000018718	zbtb18	58	90.674	ENSPMEG00000007554	zbtb18	56	94.444	Poecilia_mexicana
ENSGMOG00000018718	zbtb18	58	91.192	ENSPREG00000008576	zbtb18	56	94.656	Poecilia_reticulata
ENSGMOG00000018718	zbtb18	60	91.795	ENSPNYG00000001530	zbtb18	57	92.268	Pundamilia_nyererei
ENSGMOG00000018718	zbtb18	58	91.795	ENSSMAG00000018041	zbtb18	57	94.444	Scophthalmus_maximus
ENSGMOG00000018718	zbtb18	58	91.241	ENSSDUG00000018660	zbtb18	56	95.238	Seriola_dumerili
ENSGMOG00000018718	zbtb18	58	91.241	ENSSLDG00000022573	zbtb18	56	95.238	Seriola_lalandi_dorsalis
ENSGMOG00000018718	zbtb18	60	91.282	ENSSPAG00000002691	zbtb18	57	91.971	Stegastes_partitus
ENSGMOG00000018718	zbtb18	58	91.795	ENSTRUG00000020604	zbtb18	56	95.238	Takifugu_rubripes
ENSGMOG00000018718	zbtb18	59	91.282	ENSTNIG00000000430	zbtb18	60	93.284	Tetraodon_nigroviridis
ENSGMOG00000018718	zbtb18	58	91.192	ENSXCOG00000013308	zbtb18	60	94.444	Xiphophorus_couchianus
ENSGMOG00000018718	zbtb18	59	91.192	ENSXMAG00000018241	zbtb18	64	94.697	Xiphophorus_maculatus