EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSGMOG00000018741 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Gadus_morhua
Status: putative
Strand: Plus strand
Length: 6744 bases
Position: chrGeneScaffold_3659:36002-42745
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSGMOP00000020131	MMR_HSR1	PF01926.23	4.6e-10	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSGMOT00000020629	-	639	-	ENSGMOP00000020131	212 (aa)	-	UPI00023F3F42

Gene Model

Click here to download ENSGMOG00000018741's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSGMOG00000018741's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSGMOG00000018741	-	71	41.060	ENSGMOG00000006444	rab25b	89	41.060
ENSGMOG00000018741	-	87	30.500	ENSGMOG00000006450	rab11al	99	30.500
ENSGMOG00000018741	-	82	40.805	ENSGMOG00000016277	RAB15	82	40.805
ENSGMOG00000018741	-	74	34.810	ENSGMOG00000016608	rab18b	76	34.810
ENSGMOG00000018741	-	88	32.161	ENSGMOG00000020194	rab9b	97	32.161
ENSGMOG00000018741	-	86	62.842	ENSGMOG00000006968	-	91	62.842
ENSGMOG00000018741	-	81	32.184	ENSGMOG00000016238	rab34a	65	32.184
ENSGMOG00000018741	-	80	31.765	ENSGMOG00000013070	rab22a	84	31.765
ENSGMOG00000018741	-	79	36.994	ENSGMOG00000010022	-	83	36.994
ENSGMOG00000018741	-	88	36.458	ENSGMOG00000002552	rab30	95	36.458
ENSGMOG00000018741	-	68	40.690	ENSGMOG00000019073	-	70	40.690
ENSGMOG00000018741	-	58	39.370	ENSGMOG00000018475	RAB29	77	39.370
ENSGMOG00000018741	-	88	33.511	ENSGMOG00000000885	rab33ba	87	33.511
ENSGMOG00000018741	-	89	32.692	ENSGMOG00000004096	-	95	32.692
ENSGMOG00000018741	-	92	37.073	ENSGMOG00000004095	rab41	96	37.073
ENSGMOG00000018741	-	69	32.192	ENSGMOG00000005102	rab23	68	34.783
ENSGMOG00000018741	-	87	37.824	ENSGMOG00000002868	rab5aa	89	37.824
ENSGMOG00000018741	-	89	33.498	ENSGMOG00000008355	rab11a	94	33.498
ENSGMOG00000018741	-	71	38.816	ENSGMOG00000011665	zgc:101559	72	38.816
ENSGMOG00000018741	-	75	44.025	ENSGMOG00000003610	rab15	75	44.025
ENSGMOG00000018741	-	83	33.523	ENSGMOG00000012335	rab12	74	33.523
ENSGMOG00000018741	-	82	33.333	ENSGMOG00000014481	rab36	93	33.333
ENSGMOG00000018741	-	89	34.951	ENSGMOG00000007390	rab11ba	94	34.951
ENSGMOG00000018741	-	75	36.420	ENSGMOG00000008450	-	75	36.420
ENSGMOG00000018741	-	56	31.496	ENSGMOG00000002137	ARL4D	60	31.496
ENSGMOG00000018741	-	79	38.323	ENSGMOG00000004888	rab1ab	84	38.323
ENSGMOG00000018741	-	68	33.793	ENSGMOG00000011766	-	93	33.793
ENSGMOG00000018741	-	75	37.975	ENSGMOG00000009668	-	72	37.975
ENSGMOG00000018741	-	77	31.792	ENSGMOG00000007140	rab34b	84	31.792
ENSGMOG00000018741	-	70	36.364	ENSGMOG00000006175	rab33a	65	36.538
ENSGMOG00000018741	-	81	37.931	ENSGMOG00000007293	rab1ba	86	37.931
ENSGMOG00000018741	-	72	40.132	ENSGMOG00000007127	RAB5A	83	40.132
ENSGMOG00000018741	-	80	38.506	ENSGMOG00000007712	RAB7A	83	38.506
ENSGMOG00000018741	-	80	37.059	ENSGMOG00000017688	rab35b	97	34.359
ENSGMOG00000018741	-	79	36.527	ENSGMOG00000001834	rab4b	80	36.527
ENSGMOG00000018741	-	84	32.584	ENSGMOG00000000532	-	81	32.584
ENSGMOG00000018741	-	78	34.545	ENSGMOG00000003577	-	83	34.545
ENSGMOG00000018741	-	69	30.612	ENSGMOG00000013490	arl8a	75	30.612
ENSGMOG00000018741	-	78	54.491	ENSGMOG00000017644	si:ch211-247i17.1	95	54.491
ENSGMOG00000018741	-	92	32.195	ENSGMOG00000020144	rab9a	99	32.195
ENSGMOG00000018741	-	59	34.884	ENSGMOG00000020148	-	67	34.884
ENSGMOG00000018741	-	90	36.979	ENSGMOG00000015096	rab5c	98	34.685
ENSGMOG00000018741	-	72	40.789	ENSGMOG00000001876	-	88	40.789
ENSGMOG00000018741	-	78	36.471	ENSGMOG00000009211	rab11bb	78	36.471
ENSGMOG00000018741	-	80	38.506	ENSGMOG00000011308	-	84	38.506
ENSGMOG00000018741	-	67	32.639	ENSGMOG00000007564	rhebl1	78	32.639
ENSGMOG00000018741	-	76	36.646	ENSGMOG00000004979	-	75	36.646
ENSGMOG00000018741	-	77	35.758	ENSGMOG00000010808	RAB39B	77	35.758
ENSGMOG00000018741	-	67	34.028	ENSGMOG00000012401	rheb	78	34.028
ENSGMOG00000018741	-	57	40.164	ENSGMOG00000015174	si:dkey-16l2.16	68	40.164

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSGMOG00000018741	-	87	47.917	ENSACAG00000016658	-	99	47.917	Anolis_carolinensis
ENSGMOG00000018741	-	60	52.206	ENSETEG00000008991	-	88	52.206	Echinops_telfairi
ENSGMOG00000018741	-	90	52.105	ENSFALG00000003276	-	90	52.105	Ficedula_albicollis
ENSGMOG00000018741	-	100	78.505	ENSGACG00000019767	-	100	78.505	Gasterosteus_aculeatus
ENSGMOG00000018741	-	73	50.649	ENSLAFG00000000202	-	88	50.649	Loxodonta_africana
ENSGMOG00000018741	-	89	46.154	ENSMGAG00000002516	-	92	46.154	Meleagris_gallopavo
ENSGMOG00000018741	-	90	48.691	ENSMUSG00000064147	Rab44	66	50.867	Mus_musculus
ENSGMOG00000018741	-	99	45.498	ENSMPUG00000014188	-	84	45.498	Mustela_putorius_furo
ENSGMOG00000018741	-	73	50.000	ENSMLUG00000010706	-	82	50.000	Myotis_lucifugus
ENSGMOG00000018741	-	65	53.793	ENSMEUG00000004712	-	97	53.793	Notamacropus_eugenii
ENSGMOG00000018741	-	76	83.951	ENSONIG00000011542	-	100	83.951	Oreochromis_niloticus
ENSGMOG00000018741	-	73	58.710	ENSPSIG00000002522	-	100	58.710	Pelodiscus_sinensis
ENSGMOG00000018741	-	65	50.345	ENSPVAG00000014624	-	95	50.345	Pteropus_vampyrus
ENSGMOG00000018741	-	99	49.048	ENSTGUG00000017468	-	95	49.048	Taeniopygia_guttata
ENSGMOG00000018741	-	77	81.098	ENSTNIG00000001448	-	98	81.098	Tetraodon_nigroviridis
ENSGMOG00000018741	-	75	67.500	ENSTNIG00000008784	-	99	67.500	Tetraodon_nigroviridis