EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSGMOG00000018812 (Gene tree)
Gene ID: -
Gene Symbol: SCAF8
Alias: KIAA1116|RBM16
Full Name: SR-related CTD associated factor 8
Gene Type: protein_coding
Species: Gadus_morhua
Status: putative
Strand: Minus strand
Length: 22041 bases
Position: chrGeneScaffold_1441:225670-247710
Accession: 20959
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSGMOP00000020220	RRM_1	PF00076.22	1e-08	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSGMOT00000020719	SCAF8-201	3291	-	ENSGMOP00000020220	1097 (aa)	-	UPI00023F3E81

Gene Model

Click here to download ENSGMOG00000018812's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSGMOG00000018812's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSGMOG00000018812	SCAF8	66	70.696	ENSG00000213079	SCAF8	60	68.594	Homo_sapiens
ENSGMOG00000018812	SCAF8	83	79.893	ENSAPOG00000015527	SCAF8	64	79.893	Acanthochromis_polyacanthus
ENSGMOG00000018812	SCAF8	66	69.093	ENSAMEG00000007583	SCAF8	59	66.922	Ailuropoda_melanoleuca
ENSGMOG00000018812	SCAF8	83	80.107	ENSAOCG00000002421	SCAF8	64	80.107	Amphiprion_ocellaris
ENSGMOG00000018812	SCAF8	83	76.307	ENSATEG00000006959	SCAF8	80	76.338	Anabas_testudineus
ENSGMOG00000018812	SCAF8	68	68.662	ENSAPLG00000005765	SCAF8	61	66.624	Anas_platyrhynchos
ENSGMOG00000018812	SCAF8	68	63.063	ENSACAG00000005282	SCAF8	64	64.734	Anolis_carolinensis
ENSGMOG00000018812	SCAF8	51	57.838	ENSACAG00000002569	SCAF4	57	50.865	Anolis_carolinensis
ENSGMOG00000018812	SCAF8	66	70.635	ENSANAG00000036184	SCAF8	59	68.519	Aotus_nancymaae
ENSGMOG00000018812	SCAF8	83	79.657	ENSACLG00000018828	SCAF8	67	79.657	Astatotilapia_calliptera
ENSGMOG00000018812	SCAF8	62	74.784	ENSBTAG00000031917	SCAF8	80	56.534	Bos_taurus
ENSGMOG00000018812	SCAF8	54	47.450	ENSCJAG00000008993	SCAF4	57	55.897	Callithrix_jacchus
ENSGMOG00000018812	SCAF8	65	70.989	ENSCJAG00000012631	SCAF8	57	66.970	Callithrix_jacchus
ENSGMOG00000018812	SCAF8	82	58.366	ENSCAFG00000000570	SCAF8	80	56.988	Canis_familiaris
ENSGMOG00000018812	SCAF8	82	58.366	ENSCAFG00020015048	SCAF8	79	56.988	Canis_lupus_dingo
ENSGMOG00000018812	SCAF8	60	75.672	ENSCHIG00000025041	SCAF8	60	68.146	Capra_hircus
ENSGMOG00000018812	SCAF8	65	70.479	ENSTSYG00000010991	SCAF8	58	68.351	Carlito_syrichta
ENSGMOG00000018812	SCAF8	76	51.138	ENSCPOG00000022216	-	78	49.601	Cavia_porcellus
ENSGMOG00000018812	SCAF8	66	70.635	ENSCCAG00000024952	SCAF8	59	68.651	Cebus_capucinus
ENSGMOG00000018812	SCAF8	77	61.270	ENSCATG00000035361	SCAF8	80	57.073	Cercocebus_atys
ENSGMOG00000018812	SCAF8	83	57.828	ENSCLAG00000004910	SCAF8	80	56.380	Chinchilla_lanigera
ENSGMOG00000018812	SCAF8	77	59.938	ENSCSAG00000013430	SCAF8	80	55.927	Chlorocebus_sabaeus
ENSGMOG00000018812	SCAF8	68	70.558	ENSCPBG00000016330	SCAF8	58	68.655	Chrysemys_picta_bellii
ENSGMOG00000018812	SCAF8	77	61.522	ENSCANG00000039499	SCAF8	80	56.637	Colobus_angolensis_palliatus
ENSGMOG00000018812	SCAF8	83	59.335	ENSCGRG00001020167	Scaf8	80	57.534	Cricetulus_griseus_chok1gshd
ENSGMOG00000018812	SCAF8	83	59.037	ENSCGRG00000004120	Scaf8	80	57.256	Cricetulus_griseus_crigri
ENSGMOG00000018812	SCAF8	83	78.312	ENSCSEG00000000043	-	65	78.312	Cynoglossus_semilaevis
ENSGMOG00000018812	SCAF8	79	75.085	ENSCVAG00000000925	SCAF8	64	74.858	Cyprinodon_variegatus
ENSGMOG00000018812	SCAF8	55	74.593	ENSDNOG00000025271	SCAF8	79	55.453	Dasypus_novemcinctus
ENSGMOG00000018812	SCAF8	77	60.916	ENSDORG00000006391	Scaf8	65	63.038	Dipodomys_ordii
ENSGMOG00000018812	SCAF8	62	75.072	ENSEASG00005018879	SCAF8	60	68.235	Equus_asinus_asinus
ENSGMOG00000018812	SCAF8	62	75.072	ENSECAG00000005540	SCAF8	80	57.073	Equus_caballus
ENSGMOG00000018812	SCAF8	83	72.925	ENSELUG00000002779	SCAF8	53	85.067	Esox_lucius
ENSGMOG00000018812	SCAF8	77	62.716	ENSFCAG00000023424	SCAF8	80	59.028	Felis_catus
ENSGMOG00000018812	SCAF8	68	68.821	ENSFALG00000012433	SCAF8	61	66.413	Ficedula_albicollis
ENSGMOG00000018812	SCAF8	77	60.381	ENSFDAG00000010335	SCAF8	80	56.109	Fukomys_damarensis
ENSGMOG00000018812	SCAF8	83	77.253	ENSFHEG00000008284	SCAF8	64	77.646	Fundulus_heteroclitus
ENSGMOG00000018812	SCAF8	67	69.487	ENSGALG00000013635	SCAF8	60	66.667	Gallus_gallus
ENSGMOG00000018812	SCAF8	83	76.509	ENSGAFG00000018033	SCAF8	65	78.017	Gambusia_affinis
ENSGMOG00000018812	SCAF8	83	78.975	ENSGACG00000006909	SCAF8	83	79.616	Gasterosteus_aculeatus
ENSGMOG00000018812	SCAF8	66	70.696	ENSGGOG00000008645	SCAF8	60	68.594	Gorilla_gorilla
ENSGMOG00000018812	SCAF8	83	79.550	ENSHBUG00000019537	SCAF8	67	79.550	Haplochromis_burtoni
ENSGMOG00000018812	SCAF8	77	60.593	ENSHGLG00000003619	SCAF8	80	56.305	Heterocephalus_glaber_female
ENSGMOG00000018812	SCAF8	77	59.852	ENSHGLG00100004708	SCAF8	80	56.071	Heterocephalus_glaber_male
ENSGMOG00000018812	SCAF8	61	74.853	ENSSTOG00000026043	SCAF8	59	67.952	Ictidomys_tridecemlineatus
ENSGMOG00000018812	SCAF8	82	58.638	ENSJJAG00000020480	Scaf8	80	57.411	Jaculus_jaculus
ENSGMOG00000018812	SCAF8	83	78.135	ENSKMAG00000012767	SCAF8	65	78.135	Kryptolebias_marmoratus
ENSGMOG00000018812	SCAF8	66	91.045	ENSLBEG00000012484	-	53	86.885	Labrus_bergylta
ENSGMOG00000018812	SCAF8	83	61.333	ENSLACG00000001394	SCAF8	86	61.594	Latimeria_chalumnae
ENSGMOG00000018812	SCAF8	83	66.597	ENSLOCG00000016856	SCAF8	81	66.597	Lepisosteus_oculatus
ENSGMOG00000018812	SCAF8	60	76.006	ENSLAFG00000000022	SCAF8	80	57.726	Loxodonta_africana
ENSGMOG00000018812	SCAF8	77	61.270	ENSMFAG00000032738	SCAF8	80	57.073	Macaca_fascicularis
ENSGMOG00000018812	SCAF8	77	61.270	ENSMMUG00000015163	SCAF8	80	57.073	Macaca_mulatta
ENSGMOG00000018812	SCAF8	77	61.270	ENSMNEG00000043466	SCAF8	80	57.073	Macaca_nemestrina
ENSGMOG00000018812	SCAF8	76	61.070	ENSMLEG00000034845	SCAF8	80	56.398	Mandrillus_leucophaeus
ENSGMOG00000018812	SCAF8	79	77.416	ENSMAMG00000009457	SCAF8	64	77.079	Mastacembelus_armatus
ENSGMOG00000018812	SCAF8	83	79.550	ENSMZEG00005005698	SCAF8	67	79.550	Maylandia_zebra
ENSGMOG00000018812	SCAF8	68	69.241	ENSMGAG00000012762	SCAF8	61	66.456	Meleagris_gallopavo
ENSGMOG00000018812	SCAF8	82	59.230	ENSMAUG00000009513	Scaf8	80	57.411	Mesocricetus_auratus
ENSGMOG00000018812	SCAF8	73	64.561	ENSMICG00000028965	SCAF8	66	62.690	Microcebus_murinus
ENSGMOG00000018812	SCAF8	83	58.721	ENSMOCG00000014950	Scaf8	80	57.129	Microtus_ochrogaster
ENSGMOG00000018812	SCAF8	80	74.558	ENSMMOG00000002216	SCAF8	64	74.447	Mola_mola
ENSGMOG00000018812	SCAF8	61	76.176	ENSMODG00000008301	SCAF8	54	73.684	Monodelphis_domestica
ENSGMOG00000018812	SCAF8	83	78.465	ENSMALG00000011584	SCAF8	65	78.678	Monopterus_albus
ENSGMOG00000018812	SCAF8	83	59.433	MGP_CAROLIEiJ_G0021016	Scaf8	80	57.869	Mus_caroli
ENSGMOG00000018812	SCAF8	83	59.473	ENSMUSG00000046201	Scaf8	80	57.869	Mus_musculus
ENSGMOG00000018812	SCAF8	83	59.531	MGP_PahariEiJ_G0023334	Scaf8	80	58.023	Mus_pahari
ENSGMOG00000018812	SCAF8	77	60.248	ENSMPUG00000001974	SCAF8	81	56.119	Mustela_putorius_furo
ENSGMOG00000018812	SCAF8	77	60.212	ENSMLUG00000029190	SCAF8	60	67.323	Myotis_lucifugus
ENSGMOG00000018812	SCAF8	83	59.140	ENSNGAG00000012332	Scaf8	80	57.407	Nannospalax_galili
ENSGMOG00000018812	SCAF8	83	75.870	ENSNBRG00000009067	SCAF8	79	75.761	Neolamprologus_brichardi
ENSGMOG00000018812	SCAF8	66	69.110	ENSNLEG00000015509	SCAF8	59	66.844	Nomascus_leucogenys
ENSGMOG00000018812	SCAF8	77	60.212	ENSODEG00000007296	SCAF8	80	56.098	Octodon_degus
ENSGMOG00000018812	SCAF8	83	79.724	ENSONIG00000008119	SCAF8	79	79.724	Oreochromis_niloticus
ENSGMOG00000018812	SCAF8	82	58.679	ENSOCUG00000026063	SCAF8	59	68.351	Oryctolagus_cuniculus
ENSGMOG00000018812	SCAF8	83	77.326	ENSORLG00000017358	SCAF8	65	77.326	Oryzias_latipes
ENSGMOG00000018812	SCAF8	83	77.540	ENSORLG00020002214	SCAF8	65	77.540	Oryzias_latipes_hni
ENSGMOG00000018812	SCAF8	83	77.647	ENSORLG00015015779	SCAF8	65	77.647	Oryzias_latipes_hsok
ENSGMOG00000018812	SCAF8	83	77.861	ENSOMEG00000015471	SCAF8	65	77.861	Oryzias_melastigma
ENSGMOG00000018812	SCAF8	60	73.654	ENSOGAG00000034223	SCAF8	58	66.156	Otolemur_garnettii
ENSGMOG00000018812	SCAF8	65	69.881	ENSOARG00000004159	SCAF8	60	67.900	Ovis_aries
ENSGMOG00000018812	SCAF8	77	61.164	ENSPPAG00000039826	SCAF8	60	68.594	Pan_paniscus
ENSGMOG00000018812	SCAF8	66	70.866	ENSPPRG00000023175	SCAF8	60	68.898	Panthera_pardus
ENSGMOG00000018812	SCAF8	65	70.745	ENSPTIG00000014836	SCAF8	59	68.750	Panthera_tigris_altaica
ENSGMOG00000018812	SCAF8	77	61.164	ENSPTRG00000018727	SCAF8	60	68.594	Pan_troglodytes
ENSGMOG00000018812	SCAF8	77	61.270	ENSPANG00000017489	SCAF8	80	54.483	Papio_anubis
ENSGMOG00000018812	SCAF8	83	71.518	ENSPKIG00000021212	SCAF8	77	72.765	Paramormyrops_kingsleyae
ENSGMOG00000018812	SCAF8	82	58.934	ENSPEMG00000010531	Scaf8	80	57.312	Peromyscus_maniculatus_bairdii
ENSGMOG00000018812	SCAF8	72	76.812	ENSPCIG00000001141	SCAF8	54	76.945	Phascolarctos_cinereus
ENSGMOG00000018812	SCAF8	83	77.682	ENSPFOG00000004176	SCAF8	79	74.018	Poecilia_formosa
ENSGMOG00000018812	SCAF8	83	77.790	ENSPLAG00000021432	SCAF8	64	78.219	Poecilia_latipinna
ENSGMOG00000018812	SCAF8	83	77.754	ENSPMEG00000007591	SCAF8	70	76.796	Poecilia_mexicana
ENSGMOG00000018812	SCAF8	83	78.004	ENSPREG00000000652	SCAF8	64	78.004	Poecilia_reticulata
ENSGMOG00000018812	SCAF8	66	69.069	ENSPPYG00000017121	SCAF8	60	66.972	Pongo_abelii
ENSGMOG00000018812	SCAF8	54	78.595	ENSPCAG00000013044	SCAF8	50	76.756	Procavia_capensis
ENSGMOG00000018812	SCAF8	82	58.268	ENSPCOG00000002067	SCAF8	59	68.309	Propithecus_coquereli
ENSGMOG00000018812	SCAF8	83	59.332	ENSPVAG00000005582	SCAF8	81	57.227	Pteropus_vampyrus
ENSGMOG00000018812	SCAF8	83	79.657	ENSPNYG00000007277	SCAF8	67	79.657	Pundamilia_nyererei
ENSGMOG00000018812	SCAF8	83	72.576	ENSPNAG00000024740	SCAF8	70	73.298	Pygocentrus_nattereri
ENSGMOG00000018812	SCAF8	83	58.984	ENSRNOG00000016919	Scaf8	80	57.576	Rattus_norvegicus
ENSGMOG00000018812	SCAF8	77	61.628	ENSRBIG00000035769	SCAF8	80	57.407	Rhinopithecus_bieti
ENSGMOG00000018812	SCAF8	77	61.628	ENSRROG00000013580	SCAF8	80	57.407	Rhinopithecus_roxellana
ENSGMOG00000018812	SCAF8	66	70.635	ENSSBOG00000027023	SCAF8	59	68.519	Saimiri_boliviensis_boliviensis
ENSGMOG00000018812	SCAF8	72	75.507	ENSSHAG00000009915	SCAF8	54	75.937	Sarcophilus_harrisii
ENSGMOG00000018812	SCAF8	83	78.891	ENSSMAG00000008275	SCAF8	63	78.891	Scophthalmus_maximus
ENSGMOG00000018812	SCAF8	62	75.762	ENSSPUG00000015219	SCAF8	55	69.408	Sphenodon_punctatus
ENSGMOG00000018812	SCAF8	66	70.735	ENSSSCG00000004070	SCAF8	60	68.766	Sus_scrofa
ENSGMOG00000018812	SCAF8	68	69.459	ENSTGUG00000011151	SCAF8	61	67.010	Taeniopygia_guttata
ENSGMOG00000018812	SCAF8	83	75.906	ENSTRUG00000009243	SCAF8	65	76.226	Takifugu_rubripes
ENSGMOG00000018812	SCAF8	83	74.921	ENSTNIG00000016885	SCAF8	85	75.000	Tetraodon_nigroviridis
ENSGMOG00000018812	SCAF8	65	68.883	ENSTTRG00000014538	SCAF8	80	56.059	Tursiops_truncatus
ENSGMOG00000018812	SCAF8	77	61.693	ENSUAMG00000024736	SCAF8	80	57.143	Ursus_americanus
ENSGMOG00000018812	SCAF8	75	60.978	ENSUMAG00000013404	SCAF8	80	56.600	Ursus_maritimus
ENSGMOG00000018812	SCAF8	57	71.163	ENSVPAG00000012465	SCAF8	87	64.722	Vicugna_pacos
ENSGMOG00000018812	SCAF8	82	58.685	ENSVVUG00000007532	SCAF8	80	57.059	Vulpes_vulpes
ENSGMOG00000018812	SCAF8	62	71.179	ENSXETG00000013132	scaf8	54	70.333	Xenopus_tropicalis
ENSGMOG00000018812	SCAF8	83	78.510	ENSXMAG00000019192	SCAF8	64	78.510	Xiphophorus_maculatus