EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSGMOG00000018815 (Gene tree)
Gene ID: -
Gene Symbol: ythdc1
Alias: zgc:101592
Full Name: YTH domain containing 1
Gene Type: protein_coding
Species: Gadus_morhua
Status: putative
Strand: Minus strand
Length: 13572 bases
Position: chrGeneScaffold_3246:37192-50763
Accession: ZDB-GENE-041114-114
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSGMOP00000020214	YTH	PF04146.15	8.8e-42	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSGMOT00000020713	-	1521	-	ENSGMOP00000020214	507 (aa)	-	UPI00023F3E84

Gene Model

Click here to download ENSGMOG00000018815's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSGMOG00000018815's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSGMOG00000018815	ythdc1	79	64.311	ENSG00000083896	YTHDC1	64	64.311	Homo_sapiens
ENSGMOG00000018815	ythdc1	78	62.989	ENSAMEG00000005688	YTHDC1	63	64.539	Ailuropoda_melanoleuca
ENSGMOG00000018815	ythdc1	82	69.620	ENSACIG00000019728	ythdc1	54	82.819	Amphilophus_citrinellus
ENSGMOG00000018815	ythdc1	74	82.819	ENSAOCG00000000239	ythdc1	65	82.819	Amphiprion_ocellaris
ENSGMOG00000018815	ythdc1	69	82.379	ENSAPEG00000000618	ythdc1	55	82.379	Amphiprion_percula
ENSGMOG00000018815	ythdc1	76	81.696	ENSATEG00000023007	ythdc1	58	80.087	Anabas_testudineus
ENSGMOG00000018815	ythdc1	75	78.325	ENSAPLG00000009921	YTHDC1	57	78.325	Anas_platyrhynchos
ENSGMOG00000018815	ythdc1	70	75.369	ENSACAG00000009697	YTHDC1	55	75.369	Anolis_carolinensis
ENSGMOG00000018815	ythdc1	78	64.184	ENSANAG00000001522	YTHDC1	63	64.184	Aotus_nancymaae
ENSGMOG00000018815	ythdc1	91	50.985	ENSAMXG00000006978	ythdc1	66	57.525	Astyanax_mexicanus
ENSGMOG00000018815	ythdc1	78	62.633	ENSBTAG00000015572	YTHDC1	63	63.830	Bos_taurus
ENSGMOG00000018815	ythdc1	78	64.184	ENSCJAG00000009934	YTHDC1	63	64.184	Callithrix_jacchus
ENSGMOG00000018815	ythdc1	78	62.989	ENSCAFG00000002821	YTHDC1	63	64.539	Canis_familiaris
ENSGMOG00000018815	ythdc1	78	62.989	ENSCAFG00020027112	YTHDC1	63	64.539	Canis_lupus_dingo
ENSGMOG00000018815	ythdc1	58	81.295	ENSCHIG00000004810	YTHDC1	62	64.211	Capra_hircus
ENSGMOG00000018815	ythdc1	79	64.311	ENSTSYG00000011668	YTHDC1	64	64.311	Carlito_syrichta
ENSGMOG00000018815	ythdc1	88	60.714	ENSCPOG00000010929	YTHDC1	67	60.714	Cavia_porcellus
ENSGMOG00000018815	ythdc1	78	64.184	ENSCCAG00000035754	YTHDC1	64	64.184	Cebus_capucinus
ENSGMOG00000018815	ythdc1	78	64.184	ENSCATG00000036320	YTHDC1	63	64.184	Cercocebus_atys
ENSGMOG00000018815	ythdc1	78	63.830	ENSCLAG00000005482	YTHDC1	64	63.830	Chinchilla_lanigera
ENSGMOG00000018815	ythdc1	78	64.184	ENSCSAG00000005252	YTHDC1	63	64.184	Chlorocebus_sabaeus
ENSGMOG00000018815	ythdc1	70	77.340	ENSCPBG00000021965	YTHDC1	61	74.009	Chrysemys_picta_bellii
ENSGMOG00000018815	ythdc1	78	64.184	ENSCANG00000004769	YTHDC1	63	64.184	Colobus_angolensis_palliatus
ENSGMOG00000018815	ythdc1	73	63.475	ENSCGRG00001000816	Ythdc1	63	63.475	Cricetulus_griseus_chok1gshd
ENSGMOG00000018815	ythdc1	73	63.475	ENSCGRG00000009807	Ythdc1	64	63.475	Cricetulus_griseus_crigri
ENSGMOG00000018815	ythdc1	77	73.333	ENSDARG00000051953	ythdc1	66	73.778	Danio_rerio
ENSGMOG00000018815	ythdc1	71	77.340	ENSDNOG00000004949	YTHDC1	64	63.929	Dasypus_novemcinctus
ENSGMOG00000018815	ythdc1	78	63.830	ENSDORG00000013045	Ythdc1	64	63.830	Dipodomys_ordii
ENSGMOG00000018815	ythdc1	76	62.500	ENSEASG00005018383	YTHDC1	62	63.768	Equus_asinus_asinus
ENSGMOG00000018815	ythdc1	71	77.833	ENSECAG00000018303	YTHDC1	63	64.539	Equus_caballus
ENSGMOG00000018815	ythdc1	78	62.500	ENSEEUG00000015466	YTHDC1	63	63.830	Erinaceus_europaeus
ENSGMOG00000018815	ythdc1	73	68.085	ENSFCAG00000026791	YTHDC1	63	64.539	Felis_catus
ENSGMOG00000018815	ythdc1	68	78.325	ENSFALG00000006581	YTHDC1	74	78.325	Ficedula_albicollis
ENSGMOG00000018815	ythdc1	78	63.830	ENSFDAG00000018560	YTHDC1	65	63.830	Fukomys_damarensis
ENSGMOG00000018815	ythdc1	67	77.358	ENSFHEG00000001286	ythdc1	57	77.358	Fundulus_heteroclitus
ENSGMOG00000018815	ythdc1	75	77.833	ENSGALG00000035906	YTHDC1	53	77.833	Gallus_gallus
ENSGMOG00000018815	ythdc1	64	80.357	ENSGAFG00000001759	ythdc1	68	80.357	Gambusia_affinis
ENSGMOG00000018815	ythdc1	79	79.828	ENSGACG00000015486	ythdc1	62	79.828	Gasterosteus_aculeatus
ENSGMOG00000018815	ythdc1	70	77.340	ENSGAGG00000007108	YTHDC1	62	74.009	Gopherus_agassizii
ENSGMOG00000018815	ythdc1	78	64.184	ENSGGOG00000021958	YTHDC1	63	64.184	Gorilla_gorilla
ENSGMOG00000018815	ythdc1	71	76.847	ENSHGLG00000006319	-	60	66.946	Heterocephalus_glaber_female
ENSGMOG00000018815	ythdc1	71	74.384	ENSHGLG00100001556	-	64	62.057	Heterocephalus_glaber_male
ENSGMOG00000018815	ythdc1	82	40.233	ENSHGLG00100008060	-	50	60.773	Heterocephalus_glaber_male
ENSGMOG00000018815	ythdc1	52	84.795	ENSHCOG00000001520	ythdc1	71	75.000	Hippocampus_comes
ENSGMOG00000018815	ythdc1	79	77.612	ENSIPUG00000018136	ythdc1	62	74.439	Ictalurus_punctatus
ENSGMOG00000018815	ythdc1	78	64.184	ENSSTOG00000013652	YTHDC1	63	64.184	Ictidomys_tridecemlineatus
ENSGMOG00000018815	ythdc1	71	77.340	ENSJJAG00000010268	Ythdc1	53	77.340	Jaculus_jaculus
ENSGMOG00000018815	ythdc1	56	81.057	ENSKMAG00000006483	ythdc1	76	81.057	Kryptolebias_marmoratus
ENSGMOG00000018815	ythdc1	65	79.803	ENSLOCG00000003045	ythdc1	61	79.803	Lepisosteus_oculatus
ENSGMOG00000018815	ythdc1	77	62.681	ENSLAFG00000021592	YTHDC1	63	79.412	Loxodonta_africana
ENSGMOG00000018815	ythdc1	78	64.184	ENSMFAG00000031927	YTHDC1	63	64.184	Macaca_fascicularis
ENSGMOG00000018815	ythdc1	78	64.184	ENSMMUG00000002265	YTHDC1	60	67.364	Macaca_mulatta
ENSGMOG00000018815	ythdc1	78	64.184	ENSMNEG00000033751	YTHDC1	63	64.184	Macaca_nemestrina
ENSGMOG00000018815	ythdc1	78	64.184	ENSMLEG00000042147	YTHDC1	63	64.184	Mandrillus_leucophaeus
ENSGMOG00000018815	ythdc1	56	82.589	ENSMAMG00000013122	ythdc1	64	81.938	Mastacembelus_armatus
ENSGMOG00000018815	ythdc1	75	77.833	ENSMGAG00000010391	YTHDC1	56	77.833	Meleagris_gallopavo
ENSGMOG00000018815	ythdc1	73	63.475	ENSMAUG00000001286	Ythdc1	63	63.475	Mesocricetus_auratus
ENSGMOG00000018815	ythdc1	78	64.539	ENSMICG00000034640	YTHDC1	63	64.539	Microcebus_murinus
ENSGMOG00000018815	ythdc1	68	67.797	ENSMOCG00000020201	Ythdc1	60	66.946	Microtus_ochrogaster
ENSGMOG00000018815	ythdc1	59	61.972	ENSMODG00000009173	-	63	66.138	Monodelphis_domestica
ENSGMOG00000018815	ythdc1	70	77.833	ENSMODG00000020754	-	65	65.759	Monodelphis_domestica
ENSGMOG00000018815	ythdc1	73	67.797	MGP_CAROLIEiJ_G0027347	Ythdc1	60	66.946	Mus_caroli
ENSGMOG00000018815	ythdc1	77	64.706	ENSMUSG00000035851	Ythdc1	59	66.946	Mus_musculus
ENSGMOG00000018815	ythdc1	78	64.286	MGP_PahariEiJ_G0017126	Ythdc1	63	64.286	Mus_pahari
ENSGMOG00000018815	ythdc1	77	64.706	MGP_SPRETEiJ_G0028339	Ythdc1	59	66.946	Mus_spretus
ENSGMOG00000018815	ythdc1	83	70.000	ENSMPUG00000001743	YTHDC1	58	77.833	Mustela_putorius_furo
ENSGMOG00000018815	ythdc1	78	62.366	ENSMLUG00000016300	YTHDC1	64	63.139	Myotis_lucifugus
ENSGMOG00000018815	ythdc1	85	56.751	ENSNBRG00000007663	ythdc1	74	65.205	Neolamprologus_brichardi
ENSGMOG00000018815	ythdc1	78	62.766	ENSNLEG00000009202	YTHDC1	63	62.766	Nomascus_leucogenys
ENSGMOG00000018815	ythdc1	73	63.830	ENSODEG00000001715	YTHDC1	61	63.830	Octodon_degus
ENSGMOG00000018815	ythdc1	83	79.412	ENSONIG00000012651	ythdc1	65	82.379	Oreochromis_niloticus
ENSGMOG00000018815	ythdc1	84	77.833	ENSOCUG00000015886	YTHDC1	51	77.833	Oryctolagus_cuniculus
ENSGMOG00000018815	ythdc1	63	80.804	ENSORLG00000030544	ythdc1	54	80.804	Oryzias_latipes
ENSGMOG00000018815	ythdc1	63	81.250	ENSORLG00020019316	ythdc1	53	81.250	Oryzias_latipes_hni
ENSGMOG00000018815	ythdc1	78	64.539	ENSOGAG00000003362	YTHDC1	64	64.539	Otolemur_garnettii
ENSGMOG00000018815	ythdc1	78	62.633	ENSOARG00000008633	YTHDC1	63	63.830	Ovis_aries
ENSGMOG00000018815	ythdc1	79	64.311	ENSPPAG00000041315	YTHDC1	64	64.311	Pan_paniscus
ENSGMOG00000018815	ythdc1	73	68.085	ENSPPRG00000011979	YTHDC1	63	64.539	Panthera_pardus
ENSGMOG00000018815	ythdc1	78	62.278	ENSPTIG00000015527	YTHDC1	64	63.830	Panthera_tigris_altaica
ENSGMOG00000018815	ythdc1	79	64.311	ENSPTRG00000016105	YTHDC1	64	64.311	Pan_troglodytes
ENSGMOG00000018815	ythdc1	78	64.184	ENSPANG00000021590	YTHDC1	63	64.184	Papio_anubis
ENSGMOG00000018815	ythdc1	80	68.651	ENSPKIG00000018497	ythdc1	69	68.651	Paramormyrops_kingsleyae
ENSGMOG00000018815	ythdc1	70	77.340	ENSPSIG00000002782	YTHDC1	57	77.340	Pelodiscus_sinensis
ENSGMOG00000018815	ythdc1	78	63.475	ENSPEMG00000013850	Ythdc1	64	63.475	Peromyscus_maniculatus_bairdii
ENSGMOG00000018815	ythdc1	70	77.833	ENSPCIG00000006870	YTHDC1	57	77.833	Phascolarctos_cinereus
ENSGMOG00000018815	ythdc1	58	75.410	ENSPFOG00000013404	ythdc1	66	81.166	Poecilia_formosa
ENSGMOG00000018815	ythdc1	56	80.804	ENSPLAG00000011079	ythdc1	76	80.804	Poecilia_latipinna
ENSGMOG00000018815	ythdc1	58	75.410	ENSPMEG00000009238	ythdc1	66	81.166	Poecilia_mexicana
ENSGMOG00000018815	ythdc1	78	81.166	ENSPREG00000016973	ythdc1	63	81.166	Poecilia_reticulata
ENSGMOG00000018815	ythdc1	62	65.370	ENSPPYG00000014726	YTHDC1	61	64.615	Pongo_abelii
ENSGMOG00000018815	ythdc1	77	62.500	ENSPCOG00000019105	YTHDC1	58	62.500	Propithecus_coquereli
ENSGMOG00000018815	ythdc1	78	62.500	ENSPVAG00000015551	YTHDC1	63	62.500	Pteropus_vampyrus
ENSGMOG00000018815	ythdc1	56	76.000	ENSPNAG00000028365	ythdc1	71	65.157	Pygocentrus_nattereri
ENSGMOG00000018815	ythdc1	76	63.139	ENSRNOG00000001996	Ythdc1	62	63.139	Rattus_norvegicus
ENSGMOG00000018815	ythdc1	73	65.882	ENSRBIG00000028279	YTHDC1	63	64.643	Rhinopithecus_bieti
ENSGMOG00000018815	ythdc1	78	64.184	ENSRROG00000035028	YTHDC1	63	64.184	Rhinopithecus_roxellana
ENSGMOG00000018815	ythdc1	78	64.184	ENSSBOG00000022353	YTHDC1	63	64.184	Saimiri_boliviensis_boliviensis
ENSGMOG00000018815	ythdc1	70	77.833	ENSSHAG00000002538	YTHDC1	65	65.759	Sarcophilus_harrisii
ENSGMOG00000018815	ythdc1	73	76.444	ENSSFOG00015003298	ythdc1	62	76.889	Scleropages_formosus
ENSGMOG00000018815	ythdc1	83	58.206	ENSSDUG00000022008	ythdc1	65	82.819	Seriola_dumerili
ENSGMOG00000018815	ythdc1	67	62.937	ENSSARG00000010960	YTHDC1	71	64.460	Sorex_araneus
ENSGMOG00000018815	ythdc1	71	76.847	ENSSPUG00000009357	YTHDC1	59	72.811	Sphenodon_punctatus
ENSGMOG00000018815	ythdc1	67	81.938	ENSSPAG00000011449	ythdc1	65	81.938	Stegastes_partitus
ENSGMOG00000018815	ythdc1	73	68.085	ENSSSCG00000035505	YTHDC1	63	64.539	Sus_scrofa
ENSGMOG00000018815	ythdc1	79	78.325	ENSTGUG00000004452	-	56	78.325	Taeniopygia_guttata
ENSGMOG00000018815	ythdc1	83	65.217	ENSTNIG00000013243	ythdc1	55	82.743	Tetraodon_nigroviridis
ENSGMOG00000018815	ythdc1	69	77.833	ENSTBEG00000011546	YTHDC1	53	77.833	Tupaia_belangeri
ENSGMOG00000018815	ythdc1	78	62.500	ENSTTRG00000005083	YTHDC1	63	63.475	Tursiops_truncatus
ENSGMOG00000018815	ythdc1	62	68.085	ENSUAMG00000010388	YTHDC1	60	64.539	Ursus_americanus
ENSGMOG00000018815	ythdc1	71	62.069	ENSUMAG00000013668	YTHDC1	69	60.714	Ursus_maritimus
ENSGMOG00000018815	ythdc1	73	67.660	ENSVPAG00000009040	YTHDC1	60	67.364	Vicugna_pacos
ENSGMOG00000018815	ythdc1	78	62.989	ENSVVUG00000005387	YTHDC1	56	78.571	Vulpes_vulpes
ENSGMOG00000018815	ythdc1	68	73.246	ENSXETG00000017960	ythdc1	59	73.246	Xenopus_tropicalis
ENSGMOG00000018815	ythdc1	69	54.595	ENSXCOG00000000530	ythdc1	85	54.098	Xiphophorus_couchianus
ENSGMOG00000018815	ythdc1	77	81.166	ENSXMAG00000005196	ythdc1	66	81.166	Xiphophorus_maculatus