EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSGMOG00000018882 (Gene tree)
Gene ID: -
Gene Symbol: rtcb
Alias: zgc:76871
Full Name: RNA 2'%2C3'-cyclic phosphate and 5'-OH ligase
Gene Type: protein_coding
Species: Gadus_morhua
Status: putative
Strand: Plus strand
Length: 8615 bases
Position: chrGeneScaffold_138:6145-14759
Accession: ZDB-GENE-040426-2096
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSGMOP00000020279	RtcB	PF01139.17	9.1e-148	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSGMOT00000020780	-	1518	-	ENSGMOP00000020279	505 (aa)	-	UPI00023F3EEA

Gene Model

Click here to download ENSGMOG00000018882's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSGMOG00000018882's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSGMOG00000018882	rtcb	100	91.881	ENSG00000100220	RTCB	100	91.881	Homo_sapiens
ENSGMOG00000018882	rtcb	100	92.871	ENSAPOG00000006040	rtcb	100	92.871	Acanthochromis_polyacanthus
ENSGMOG00000018882	rtcb	100	91.881	ENSAMEG00000016152	RTCB	100	91.881	Ailuropoda_melanoleuca
ENSGMOG00000018882	rtcb	100	87.327	ENSACIG00000009083	rtcb	100	87.327	Amphilophus_citrinellus
ENSGMOG00000018882	rtcb	100	93.069	ENSAOCG00000005662	rtcb	100	94.783	Amphiprion_ocellaris
ENSGMOG00000018882	rtcb	100	93.069	ENSAPEG00000024701	rtcb	100	93.069	Amphiprion_percula
ENSGMOG00000018882	rtcb	96	89.117	ENSAPEG00000024653	rtcb	100	89.117	Amphiprion_percula
ENSGMOG00000018882	rtcb	100	92.871	ENSATEG00000000618	rtcb	100	92.871	Anabas_testudineus
ENSGMOG00000018882	rtcb	100	88.825	ENSACAG00000014817	RTCB	100	88.825	Anolis_carolinensis
ENSGMOG00000018882	rtcb	72	94.444	ENSANAG00000023724	-	84	94.444	Aotus_nancymaae
ENSGMOG00000018882	rtcb	100	77.624	ENSANAG00000018191	-	91	77.624	Aotus_nancymaae
ENSGMOG00000018882	rtcb	100	91.683	ENSACLG00000008367	rtcb	100	93.261	Astatotilapia_calliptera
ENSGMOG00000018882	rtcb	100	94.455	ENSAMXG00000042320	rtcb	100	94.455	Astyanax_mexicanus
ENSGMOG00000018882	rtcb	100	91.881	ENSBTAG00000011070	RTCB	100	91.881	Bos_taurus
ENSGMOG00000018882	rtcb	100	73.267	WBGene00008877	rtcb-1	100	73.267	Caenorhabditis_elegans
ENSGMOG00000018882	rtcb	100	91.683	ENSCJAG00000006128	RTCB	100	91.683	Callithrix_jacchus
ENSGMOG00000018882	rtcb	100	87.525	ENSCAFG00000010789	-	100	87.525	Canis_familiaris
ENSGMOG00000018882	rtcb	100	91.881	ENSCAFG00000001785	RTCB	100	91.881	Canis_familiaris
ENSGMOG00000018882	rtcb	87	87.727	ENSCAFG00020018953	-	99	87.727	Canis_lupus_dingo
ENSGMOG00000018882	rtcb	100	91.881	ENSCAFG00020004890	-	100	91.881	Canis_lupus_dingo
ENSGMOG00000018882	rtcb	100	91.881	ENSCHIG00000027009	-	100	91.881	Capra_hircus
ENSGMOG00000018882	rtcb	100	91.683	ENSTSYG00000012320	RTCB	100	91.683	Carlito_syrichta
ENSGMOG00000018882	rtcb	94	92.243	ENSCAPG00000011647	RTCB	96	92.243	Cavia_aperea
ENSGMOG00000018882	rtcb	100	91.683	ENSCCAG00000000618	RTCB	100	91.683	Cebus_capucinus
ENSGMOG00000018882	rtcb	100	91.683	ENSCATG00000033424	RTCB	100	91.683	Cercocebus_atys
ENSGMOG00000018882	rtcb	100	91.683	ENSCLAG00000007997	RTCB	100	91.683	Chinchilla_lanigera
ENSGMOG00000018882	rtcb	100	91.485	ENSCSAG00000008351	RTCB	100	91.485	Chlorocebus_sabaeus
ENSGMOG00000018882	rtcb	100	78.218	ENSCHOG00000009123	RTCB	100	78.218	Choloepus_hoffmanni
ENSGMOG00000018882	rtcb	100	91.683	ENSCPBG00000023184	RTCB	100	91.683	Chrysemys_picta_bellii
ENSGMOG00000018882	rtcb	100	81.386	ENSCING00000003830	-	100	81.386	Ciona_intestinalis
ENSGMOG00000018882	rtcb	100	81.782	ENSCSAVG00000008124	-	99	81.782	Ciona_savignyi
ENSGMOG00000018882	rtcb	100	88.119	ENSCANG00000001891	RTCB	100	88.119	Colobus_angolensis_palliatus
ENSGMOG00000018882	rtcb	100	91.485	ENSCGRG00001011173	Rtcb	100	91.485	Cricetulus_griseus_chok1gshd
ENSGMOG00000018882	rtcb	93	92.569	ENSCGRG00000009587	-	96	92.569	Cricetulus_griseus_crigri
ENSGMOG00000018882	rtcb	100	92.079	ENSCSEG00000003986	rtcb	100	92.079	Cynoglossus_semilaevis
ENSGMOG00000018882	rtcb	82	91.827	ENSCVAG00000000569	rtcb	95	91.827	Cyprinodon_variegatus
ENSGMOG00000018882	rtcb	100	94.059	ENSDARG00000101047	rtcb	100	94.059	Danio_rerio
ENSGMOG00000018882	rtcb	80	88.943	ENSDNOG00000012425	RTCB	99	88.943	Dasypus_novemcinctus
ENSGMOG00000018882	rtcb	100	91.485	ENSDORG00000010855	Rtcb	100	91.485	Dipodomys_ordii
ENSGMOG00000018882	rtcb	100	82.772	FBgn0032781	RtcB	99	82.772	Drosophila_melanogaster
ENSGMOG00000018882	rtcb	100	85.941	ENSETEG00000001988	RTCB	100	85.941	Echinops_telfairi
ENSGMOG00000018882	rtcb	100	84.554	ENSEBUG00000014235	rtcb	100	84.554	Eptatretus_burgeri
ENSGMOG00000018882	rtcb	100	91.683	ENSEASG00005019059	RTCB	100	91.683	Equus_asinus_asinus
ENSGMOG00000018882	rtcb	100	91.683	ENSECAG00000023998	RTCB	100	91.683	Equus_caballus
ENSGMOG00000018882	rtcb	88	84.081	ENSEEUG00000006251	RTCB	99	84.081	Erinaceus_europaeus
ENSGMOG00000018882	rtcb	100	82.609	ENSELUG00000009275	rtcb	100	82.609	Esox_lucius
ENSGMOG00000018882	rtcb	100	91.881	ENSFCAG00000026480	RTCB	100	91.881	Felis_catus
ENSGMOG00000018882	rtcb	100	93.069	ENSFALG00000013334	RTCB	100	93.069	Ficedula_albicollis
ENSGMOG00000018882	rtcb	100	91.683	ENSFDAG00000018150	RTCB	100	91.683	Fukomys_damarensis
ENSGMOG00000018882	rtcb	100	93.465	ENSFHEG00000009595	rtcb	100	93.465	Fundulus_heteroclitus
ENSGMOG00000018882	rtcb	100	92.277	ENSGALG00000012611	RTCB	100	92.277	Gallus_gallus
ENSGMOG00000018882	rtcb	100	92.277	ENSGAFG00000004198	rtcb	100	92.277	Gambusia_affinis
ENSGMOG00000018882	rtcb	100	94.257	ENSGACG00000000586	rtcb	100	94.257	Gasterosteus_aculeatus
ENSGMOG00000018882	rtcb	93	90.851	ENSGAGG00000019133	RTCB	98	90.851	Gopherus_agassizii
ENSGMOG00000018882	rtcb	100	91.881	ENSGGOG00000011402	RTCB	100	91.881	Gorilla_gorilla
ENSGMOG00000018882	rtcb	100	91.683	ENSHBUG00000020571	rtcb	100	91.683	Haplochromis_burtoni
ENSGMOG00000018882	rtcb	100	91.683	ENSHGLG00000004492	RTCB	100	91.683	Heterocephalus_glaber_female
ENSGMOG00000018882	rtcb	93	66.525	ENSHGLG00000001066	-	99	66.525	Heterocephalus_glaber_female
ENSGMOG00000018882	rtcb	100	91.683	ENSHGLG00100008965	RTCB	100	91.683	Heterocephalus_glaber_male
ENSGMOG00000018882	rtcb	100	91.716	ENSHCOG00000006450	rtcb	100	91.716	Hippocampus_comes
ENSGMOG00000018882	rtcb	100	95.050	ENSIPUG00000015443	rtcb	100	95.050	Ictalurus_punctatus
ENSGMOG00000018882	rtcb	100	91.881	ENSSTOG00000003878	RTCB	100	91.881	Ictidomys_tridecemlineatus
ENSGMOG00000018882	rtcb	100	91.683	ENSJJAG00000010667	Rtcb	100	91.683	Jaculus_jaculus
ENSGMOG00000018882	rtcb	100	93.267	ENSKMAG00000013178	rtcb	100	93.267	Kryptolebias_marmoratus
ENSGMOG00000018882	rtcb	100	94.653	ENSLBEG00000010566	RTCB	100	94.653	Labrus_bergylta
ENSGMOG00000018882	rtcb	100	93.465	ENSLBEG00000000214	rtcb	100	93.465	Labrus_bergylta
ENSGMOG00000018882	rtcb	100	91.683	ENSLACG00000013033	RTCB	100	91.683	Latimeria_chalumnae
ENSGMOG00000018882	rtcb	100	93.861	ENSLOCG00000016515	rtcb	99	93.861	Lepisosteus_oculatus
ENSGMOG00000018882	rtcb	100	91.089	ENSLAFG00000002082	RTCB	100	91.089	Loxodonta_africana
ENSGMOG00000018882	rtcb	100	91.485	ENSMFAG00000034419	RTCB	100	91.485	Macaca_fascicularis
ENSGMOG00000018882	rtcb	100	91.485	ENSMMUG00000006720	RTCB	100	91.485	Macaca_mulatta
ENSGMOG00000018882	rtcb	100	91.485	ENSMNEG00000040669	RTCB	100	91.485	Macaca_nemestrina
ENSGMOG00000018882	rtcb	100	91.683	ENSMLEG00000040505	RTCB	100	91.683	Mandrillus_leucophaeus
ENSGMOG00000018882	rtcb	100	92.673	ENSMAMG00000020676	rtcb	100	92.673	Mastacembelus_armatus
ENSGMOG00000018882	rtcb	100	91.683	ENSMZEG00005018942	rtcb	100	91.683	Maylandia_zebra
ENSGMOG00000018882	rtcb	100	91.913	ENSMGAG00000012805	RTCB	100	91.913	Meleagris_gallopavo
ENSGMOG00000018882	rtcb	60	95.575	ENSMAUG00000008301	Rtcb	100	95.575	Mesocricetus_auratus
ENSGMOG00000018882	rtcb	100	72.871	ENSMICG00000036677	-	100	72.871	Microcebus_murinus
ENSGMOG00000018882	rtcb	100	91.683	ENSMICG00000013303	-	100	91.683	Microcebus_murinus
ENSGMOG00000018882	rtcb	100	91.881	ENSMOCG00000002440	Rtcb	100	91.881	Microtus_ochrogaster
ENSGMOG00000018882	rtcb	100	92.673	ENSMMOG00000005987	rtcb	100	92.673	Mola_mola
ENSGMOG00000018882	rtcb	100	92.277	ENSMODG00000001414	RTCB	100	92.277	Monodelphis_domestica
ENSGMOG00000018882	rtcb	100	93.267	ENSMALG00000007603	rtcb	100	93.267	Monopterus_albus
ENSGMOG00000018882	rtcb	100	91.485	MGP_CAROLIEiJ_G0015689	Rtcb	100	91.485	Mus_caroli
ENSGMOG00000018882	rtcb	100	91.485	ENSMUSG00000001783	Rtcb	100	91.485	Mus_musculus
ENSGMOG00000018882	rtcb	100	91.485	MGP_PahariEiJ_G0031396	Rtcb	100	91.485	Mus_pahari
ENSGMOG00000018882	rtcb	100	91.485	MGP_SPRETEiJ_G0016507	Rtcb	100	91.485	Mus_spretus
ENSGMOG00000018882	rtcb	100	91.881	ENSMPUG00000012285	RTCB	100	91.881	Mustela_putorius_furo
ENSGMOG00000018882	rtcb	100	89.546	ENSMLUG00000007803	RTCB	100	89.546	Myotis_lucifugus
ENSGMOG00000018882	rtcb	77	87.241	ENSNGAG00000005093	Rtcb	100	87.241	Nannospalax_galili
ENSGMOG00000018882	rtcb	100	91.881	ENSNBRG00000017202	rtcb	100	91.881	Neolamprologus_brichardi
ENSGMOG00000018882	rtcb	100	91.881	ENSNLEG00000004960	RTCB	100	91.881	Nomascus_leucogenys
ENSGMOG00000018882	rtcb	100	68.911	ENSMEUG00000007809	-	100	68.911	Notamacropus_eugenii
ENSGMOG00000018882	rtcb	73	92.500	ENSOPRG00000003488	RTCB	79	92.500	Ochotona_princeps
ENSGMOG00000018882	rtcb	100	61.386	ENSODEG00000005042	-	100	61.386	Octodon_degus
ENSGMOG00000018882	rtcb	85	85.366	ENSODEG00000013033	-	100	85.366	Octodon_degus
ENSGMOG00000018882	rtcb	100	93.069	ENSONIG00000007474	rtcb	100	93.069	Oreochromis_niloticus
ENSGMOG00000018882	rtcb	100	92.079	ENSOANG00000005524	RTCB	100	92.079	Ornithorhynchus_anatinus
ENSGMOG00000018882	rtcb	96	89.072	ENSOCUG00000008270	RTCB	99	89.072	Oryctolagus_cuniculus
ENSGMOG00000018882	rtcb	100	93.861	ENSORLG00000020093	rtcb	100	93.861	Oryzias_latipes
ENSGMOG00000018882	rtcb	100	93.861	ENSORLG00020003706	rtcb	100	93.861	Oryzias_latipes_hni
ENSGMOG00000018882	rtcb	100	93.663	ENSORLG00015002968	rtcb	100	93.663	Oryzias_latipes_hsok
ENSGMOG00000018882	rtcb	100	92.871	ENSOMEG00000021278	rtcb	100	92.871	Oryzias_melastigma
ENSGMOG00000018882	rtcb	100	91.089	ENSOGAG00000001425	RTCB	100	91.089	Otolemur_garnettii
ENSGMOG00000018882	rtcb	100	91.881	ENSOARG00000018008	RTCB	100	91.881	Ovis_aries
ENSGMOG00000018882	rtcb	100	91.881	ENSPPAG00000028667	RTCB	100	91.881	Pan_paniscus
ENSGMOG00000018882	rtcb	100	91.881	ENSPPRG00000004038	RTCB	100	91.881	Panthera_pardus
ENSGMOG00000018882	rtcb	94	88.211	ENSPTIG00000020499	RTCB	97	89.053	Panthera_tigris_altaica
ENSGMOG00000018882	rtcb	100	91.881	ENSPTRG00000014287	RTCB	100	91.881	Pan_troglodytes
ENSGMOG00000018882	rtcb	100	91.485	ENSPANG00000016035	RTCB	100	91.485	Papio_anubis
ENSGMOG00000018882	rtcb	100	94.059	ENSPKIG00000001881	rtcb	100	94.059	Paramormyrops_kingsleyae
ENSGMOG00000018882	rtcb	91	92.609	ENSPSIG00000011690	RTCB	100	92.609	Pelodiscus_sinensis
ENSGMOG00000018882	rtcb	100	92.475	ENSPMGG00000016672	rtcb	100	92.475	Periophthalmus_magnuspinnatus
ENSGMOG00000018882	rtcb	100	91.485	ENSPEMG00000019548	Rtcb	100	91.485	Peromyscus_maniculatus_bairdii
ENSGMOG00000018882	rtcb	100	89.505	ENSPMAG00000005657	rtcb	100	89.505	Petromyzon_marinus
ENSGMOG00000018882	rtcb	100	92.277	ENSPCIG00000009467	RTCB	100	92.277	Phascolarctos_cinereus
ENSGMOG00000018882	rtcb	100	92.673	ENSPFOG00000003058	rtcb	100	92.673	Poecilia_formosa
ENSGMOG00000018882	rtcb	100	92.871	ENSPLAG00000017663	rtcb	100	92.871	Poecilia_latipinna
ENSGMOG00000018882	rtcb	100	92.673	ENSPMEG00000006227	rtcb	100	92.673	Poecilia_mexicana
ENSGMOG00000018882	rtcb	100	92.475	ENSPREG00000018467	rtcb	100	92.475	Poecilia_reticulata
ENSGMOG00000018882	rtcb	100	91.881	ENSPPYG00000011752	RTCB	100	91.881	Pongo_abelii
ENSGMOG00000018882	rtcb	93	75.000	ENSPCAG00000013641	RTCB	100	75.000	Procavia_capensis
ENSGMOG00000018882	rtcb	100	91.683	ENSPCOG00000017243	RTCB	100	91.683	Propithecus_coquereli
ENSGMOG00000018882	rtcb	93	90.851	ENSPVAG00000002380	RTCB	100	90.851	Pteropus_vampyrus
ENSGMOG00000018882	rtcb	100	91.683	ENSPNYG00000022760	rtcb	100	91.683	Pundamilia_nyererei
ENSGMOG00000018882	rtcb	100	94.653	ENSPNAG00000009209	rtcb	100	94.653	Pygocentrus_nattereri
ENSGMOG00000018882	rtcb	100	91.485	ENSRNOG00000004813	Rtcb	100	91.485	Rattus_norvegicus
ENSGMOG00000018882	rtcb	100	83.564	ENSRBIG00000042090	RTCB	100	83.564	Rhinopithecus_bieti
ENSGMOG00000018882	rtcb	100	87.129	ENSSBOG00000020085	-	100	87.129	Saimiri_boliviensis_boliviensis
ENSGMOG00000018882	rtcb	94	92.827	ENSSHAG00000016277	RTCB	100	92.827	Sarcophilus_harrisii
ENSGMOG00000018882	rtcb	100	92.079	ENSSFOG00015000763	rtcb	100	92.079	Scleropages_formosus
ENSGMOG00000018882	rtcb	100	91.683	ENSSFOG00015011572	RTCB	100	91.683	Scleropages_formosus
ENSGMOG00000018882	rtcb	100	91.089	ENSSMAG00000005096	rtcb	100	91.089	Scophthalmus_maximus
ENSGMOG00000018882	rtcb	100	92.871	ENSSDUG00000012605	rtcb	100	92.871	Seriola_dumerili
ENSGMOG00000018882	rtcb	100	92.871	ENSSLDG00000019458	rtcb	100	92.871	Seriola_lalandi_dorsalis
ENSGMOG00000018882	rtcb	66	97.143	ENSSARG00000004799	-	70	97.143	Sorex_araneus
ENSGMOG00000018882	rtcb	100	91.485	ENSSPUG00000012814	RTCB	100	91.485	Sphenodon_punctatus
ENSGMOG00000018882	rtcb	100	93.069	ENSSPAG00000004623	rtcb	100	93.069	Stegastes_partitus
ENSGMOG00000018882	rtcb	100	91.881	ENSSSCG00000000158	RTCB	100	91.881	Sus_scrofa
ENSGMOG00000018882	rtcb	100	93.069	ENSTGUG00000010947	RTCB	99	93.069	Taeniopygia_guttata
ENSGMOG00000018882	rtcb	91	94.348	ENSTRUG00000009880	rtcb	100	94.348	Takifugu_rubripes
ENSGMOG00000018882	rtcb	100	91.881	ENSTNIG00000002484	rtcb	100	91.881	Tetraodon_nigroviridis
ENSGMOG00000018882	rtcb	100	79.010	ENSTBEG00000004418	RTCB	100	79.010	Tupaia_belangeri
ENSGMOG00000018882	rtcb	93	91.064	ENSTTRG00000006417	RTCB	100	91.064	Tursiops_truncatus
ENSGMOG00000018882	rtcb	100	91.881	ENSUAMG00000022792	RTCB	100	91.881	Ursus_americanus
ENSGMOG00000018882	rtcb	100	91.881	ENSUMAG00000017225	RTCB	100	91.881	Ursus_maritimus
ENSGMOG00000018882	rtcb	100	91.683	ENSVPAG00000005375	RTCB	100	91.683	Vicugna_pacos
ENSGMOG00000018882	rtcb	100	91.881	ENSVVUG00000023408	RTCB	100	92.629	Vulpes_vulpes
ENSGMOG00000018882	rtcb	100	91.485	ENSXETG00000011523	rtcb	100	91.485	Xenopus_tropicalis
ENSGMOG00000018882	rtcb	100	92.277	ENSXMAG00000002855	rtcb	100	92.277	Xiphophorus_maculatus