EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSGMOG00000018960 (Gene tree)
Gene ID: -
Gene Symbol: vars2
Alias: si:ch211-152p11.2
Full Name: valyl-tRNA synthetase 2%2C mitochondrial (putative)
Gene Type: protein_coding
Species: Gadus_morhua
Status: putative
Strand: Plus strand
Length: 20891 bases
Position: chrGeneScaffold_350:31596-52486
Accession: ZDB-GENE-060503-575
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSGMOP00000020397	tRNA-synt_1g	PF09334.11	2e-16	1	1
ENSGMOP00000020397	Anticodon_1	PF08264.13	1.6e-27	1	1
ENSGMOP00000020397	tRNA-synt_1	PF00133.22	1.6e-193	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSGMOT00000020898	-	2835	-	ENSGMOP00000020397	945 (aa)	-	UPI00023F49A8

Gene Model

Click here to download ENSGMOG00000018960's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSGMOG00000018960's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSGMOG00000018960	vars2	99	50.512	ENSGMOG00000014908	vars	78	50.512

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSGMOG00000018960	vars2	99	70.787	ENSAPOG00000007396	vars2	90	70.787	Acanthochromis_polyacanthus
ENSGMOG00000018960	vars2	99	55.567	ENSAMEG00000012997	VARS2	86	55.567	Ailuropoda_melanoleuca
ENSGMOG00000018960	vars2	99	71.458	ENSACIG00000004344	vars2	91	71.458	Amphilophus_citrinellus
ENSGMOG00000018960	vars2	99	70.991	ENSAOCG00000000476	vars2	90	70.991	Amphiprion_ocellaris
ENSGMOG00000018960	vars2	99	70.889	ENSAPEG00000008646	vars2	88	70.889	Amphiprion_percula
ENSGMOG00000018960	vars2	99	73.018	ENSATEG00000012291	vars2	90	73.018	Anabas_testudineus
ENSGMOG00000018960	vars2	97	55.743	ENSACAG00000022093	VARS2	86	55.743	Anolis_carolinensis
ENSGMOG00000018960	vars2	99	54.460	ENSANAG00000038018	VARS2	88	54.460	Aotus_nancymaae
ENSGMOG00000018960	vars2	99	70.991	ENSACLG00000018673	vars2	91	70.991	Astatotilapia_calliptera
ENSGMOG00000018960	vars2	99	69.388	ENSAMXG00000017773	vars2	91	70.394	Astyanax_mexicanus
ENSGMOG00000018960	vars2	99	55.567	ENSBTAG00000010698	VARS2	88	55.462	Bos_taurus
ENSGMOG00000018960	vars2	99	54.565	ENSCJAG00000019826	VARS2	88	54.669	Callithrix_jacchus
ENSGMOG00000018960	vars2	99	55.637	ENSCAFG00000000454	VARS2	89	55.637	Canis_familiaris
ENSGMOG00000018960	vars2	88	59.555	ENSCAFG00020019387	VARS2	89	58.480	Canis_lupus_dingo
ENSGMOG00000018960	vars2	99	56.034	ENSCHIG00000007847	VARS2	88	56.034	Capra_hircus
ENSGMOG00000018960	vars2	99	55.439	ENSTSYG00000009904	VARS2	88	55.439	Carlito_syrichta
ENSGMOG00000018960	vars2	92	54.893	ENSCAPG00000017770	VARS2	94	54.893	Cavia_aperea
ENSGMOG00000018960	vars2	99	54.727	ENSCPOG00000021834	VARS2	88	54.727	Cavia_porcellus
ENSGMOG00000018960	vars2	99	55.089	ENSCCAG00000037907	VARS2	87	57.601	Cebus_capucinus
ENSGMOG00000018960	vars2	99	54.984	ENSCATG00000032554	VARS2	88	55.089	Cercocebus_atys
ENSGMOG00000018960	vars2	99	55.299	ENSCLAG00000002889	VARS2	89	55.299	Chinchilla_lanigera
ENSGMOG00000018960	vars2	99	55.299	ENSCSAG00000008327	VARS2	88	55.404	Chlorocebus_sabaeus
ENSGMOG00000018960	vars2	98	56.614	ENSCPBG00000021502	VARS2	98	52.426	Chrysemys_picta_bellii
ENSGMOG00000018960	vars2	99	54.879	ENSCANG00000014991	VARS2	88	54.984	Colobus_angolensis_palliatus
ENSGMOG00000018960	vars2	98	55.789	ENSCGRG00001021535	Vars2	89	55.789	Cricetulus_griseus_chok1gshd
ENSGMOG00000018960	vars2	98	55.789	ENSCGRG00000014112	Vars2	89	55.789	Cricetulus_griseus_crigri
ENSGMOG00000018960	vars2	87	74.419	ENSCSEG00000015432	vars2	88	74.419	Cynoglossus_semilaevis
ENSGMOG00000018960	vars2	72	69.492	ENSCVAG00000017765	vars2	98	69.492	Cyprinodon_variegatus
ENSGMOG00000018960	vars2	100	68.351	ENSDARG00000056717	vars2	91	68.351	Danio_rerio
ENSGMOG00000018960	vars2	85	52.433	ENSDORG00000008516	Vars2	90	52.433	Dipodomys_ordii
ENSGMOG00000018960	vars2	99	49.634	ENSETEG00000014844	VARS2	88	49.634	Echinops_telfairi
ENSGMOG00000018960	vars2	98	55.285	ENSEASG00005019997	VARS2	95	56.905	Equus_asinus_asinus
ENSGMOG00000018960	vars2	98	55.684	ENSECAG00000018202	VARS2	88	55.789	Equus_caballus
ENSGMOG00000018960	vars2	99	71.226	ENSELUG00000017824	vars2	90	71.226	Esox_lucius
ENSGMOG00000018960	vars2	99	55.671	ENSFCAG00000010531	VARS2	89	55.671	Felis_catus
ENSGMOG00000018960	vars2	99	54.679	ENSFDAG00000017216	VARS2	88	54.679	Fukomys_damarensis
ENSGMOG00000018960	vars2	96	68.757	ENSFHEG00000013932	vars2	91	68.867	Fundulus_heteroclitus
ENSGMOG00000018960	vars2	90	67.506	ENSGAFG00000004737	vars2	89	67.506	Gambusia_affinis
ENSGMOG00000018960	vars2	99	71.028	ENSGACG00000001464	vars2	97	71.028	Gasterosteus_aculeatus
ENSGMOG00000018960	vars2	97	56.794	ENSGAGG00000011652	VARS2	94	56.794	Gopherus_agassizii
ENSGMOG00000018960	vars2	98	54.632	ENSGGOG00000014587	VARS2	88	54.737	Gorilla_gorilla
ENSGMOG00000018960	vars2	98	69.751	ENSHBUG00000002448	vars2	93	69.751	Haplochromis_burtoni
ENSGMOG00000018960	vars2	98	54.995	ENSHGLG00000012886	VARS2	85	55.053	Heterocephalus_glaber_female
ENSGMOG00000018960	vars2	98	54.890	ENSHGLG00100016535	VARS2	88	55.100	Heterocephalus_glaber_male
ENSGMOG00000018960	vars2	73	68.289	ENSHCOG00000017907	vars2	95	68.289	Hippocampus_comes
ENSGMOG00000018960	vars2	99	70.134	ENSIPUG00000015573	Vars2	90	70.134	Ictalurus_punctatus
ENSGMOG00000018960	vars2	99	55.824	ENSSTOG00000009924	VARS2	88	55.929	Ictidomys_tridecemlineatus
ENSGMOG00000018960	vars2	99	55.310	ENSJJAG00000011144	Vars2	89	55.415	Jaculus_jaculus
ENSGMOG00000018960	vars2	99	70.000	ENSKMAG00000001393	vars2	89	70.000	Kryptolebias_marmoratus
ENSGMOG00000018960	vars2	58	77.798	ENSLBEG00000005480	-	81	77.437	Labrus_bergylta
ENSGMOG00000018960	vars2	98	70.312	ENSLBEG00000011949	vars2	89	70.312	Labrus_bergylta
ENSGMOG00000018960	vars2	96	53.928	ENSLACG00000001576	-	93	52.738	Latimeria_chalumnae
ENSGMOG00000018960	vars2	97	55.132	ENSLAFG00000015183	VARS2	89	55.344	Loxodonta_africana
ENSGMOG00000018960	vars2	99	55.194	ENSMFAG00000042367	VARS2	88	55.299	Macaca_fascicularis
ENSGMOG00000018960	vars2	99	55.299	ENSMMUG00000018609	VARS2	88	55.404	Macaca_mulatta
ENSGMOG00000018960	vars2	99	55.299	ENSMNEG00000043163	VARS2	88	55.404	Macaca_nemestrina
ENSGMOG00000018960	vars2	99	55.194	ENSMLEG00000041728	VARS2	86	55.299	Mandrillus_leucophaeus
ENSGMOG00000018960	vars2	99	71.166	ENSMAMG00000020339	vars2	90	71.166	Mastacembelus_armatus
ENSGMOG00000018960	vars2	99	70.889	ENSMZEG00005017669	vars2	91	70.889	Maylandia_zebra
ENSGMOG00000018960	vars2	99	55.929	ENSMAUG00000018946	Vars2	89	55.929	Mesocricetus_auratus
ENSGMOG00000018960	vars2	85	59.512	ENSMICG00000005365	VARS2	92	59.512	Microcebus_murinus
ENSGMOG00000018960	vars2	99	53.789	ENSMOCG00000014607	Vars2	88	53.789	Microtus_ochrogaster
ENSGMOG00000018960	vars2	99	68.933	ENSMMOG00000012122	vars2	90	68.933	Mola_mola
ENSGMOG00000018960	vars2	98	53.822	ENSMODG00000015848	VARS2	88	53.822	Monodelphis_domestica
ENSGMOG00000018960	vars2	99	70.971	ENSMALG00000009217	vars2	96	70.971	Monopterus_albus
ENSGMOG00000018960	vars2	99	55.941	MGP_CAROLIEiJ_G0021529	Vars2	97	55.830	Mus_caroli
ENSGMOG00000018960	vars2	99	55.521	ENSMUSG00000038838	Vars2	98	54.912	Mus_musculus
ENSGMOG00000018960	vars2	99	55.731	MGP_PahariEiJ_G0020523	Vars2	93	56.985	Mus_pahari
ENSGMOG00000018960	vars2	99	55.731	MGP_SPRETEiJ_G0022436	Vars2	97	55.654	Mus_spretus
ENSGMOG00000018960	vars2	99	55.695	ENSMPUG00000011643	VARS2	89	55.695	Mustela_putorius_furo
ENSGMOG00000018960	vars2	99	56.667	ENSMLUG00000002356	VARS2	86	56.920	Myotis_lucifugus
ENSGMOG00000018960	vars2	97	51.709	ENSNGAG00000020607	Vars2	87	51.709	Nannospalax_galili
ENSGMOG00000018960	vars2	75	64.088	ENSNBRG00000001624	vars2	58	64.088	Neolamprologus_brichardi
ENSGMOG00000018960	vars2	98	54.000	ENSNLEG00000005625	VARS2	87	54.105	Nomascus_leucogenys
ENSGMOG00000018960	vars2	82	57.841	ENSMEUG00000014475	VARS2	82	57.841	Notamacropus_eugenii
ENSGMOG00000018960	vars2	87	64.667	ENSOPRG00000000682	VARS2	78	64.667	Ochotona_princeps
ENSGMOG00000018960	vars2	99	55.626	ENSODEG00000017965	VARS2	88	55.882	Octodon_degus
ENSGMOG00000018960	vars2	99	52.716	ENSONIG00000004734	vars2	97	52.573	Oreochromis_niloticus
ENSGMOG00000018960	vars2	74	47.115	ENSOANG00000000398	-	89	47.115	Ornithorhynchus_anatinus
ENSGMOG00000018960	vars2	98	51.031	ENSOCUG00000021496	VARS2	57	51.767	Oryctolagus_cuniculus
ENSGMOG00000018960	vars2	99	66.905	ENSORLG00000010632	vars2	90	66.905	Oryzias_latipes
ENSGMOG00000018960	vars2	99	67.211	ENSORLG00020018584	vars2	90	67.211	Oryzias_latipes_hni
ENSGMOG00000018960	vars2	99	67.211	ENSORLG00015010408	vars2	90	67.211	Oryzias_latipes_hsok
ENSGMOG00000018960	vars2	99	67.926	ENSOMEG00000008360	vars2	90	67.926	Oryzias_melastigma
ENSGMOG00000018960	vars2	99	55.404	ENSOGAG00000006087	VARS2	86	55.404	Otolemur_garnettii
ENSGMOG00000018960	vars2	99	55.241	ENSOARG00000010844	VARS2	87	55.241	Ovis_aries
ENSGMOG00000018960	vars2	98	54.737	ENSPPAG00000041141	VARS2	88	54.737	Pan_paniscus
ENSGMOG00000018960	vars2	99	55.671	ENSPPRG00000006751	VARS2	87	55.671	Panthera_pardus
ENSGMOG00000018960	vars2	99	55.671	ENSPTIG00000017799	VARS2	93	55.671	Panthera_tigris_altaica
ENSGMOG00000018960	vars2	98	54.737	ENSPTRG00000034497	VARS2	88	54.737	Pan_troglodytes
ENSGMOG00000018960	vars2	99	55.089	ENSPANG00000018481	VARS2	91	55.194	Papio_anubis
ENSGMOG00000018960	vars2	99	69.556	ENSPKIG00000011372	vars2	90	69.556	Paramormyrops_kingsleyae
ENSGMOG00000018960	vars2	66	64.094	ENSPSIG00000006206	VARS2	92	63.820	Pelodiscus_sinensis
ENSGMOG00000018960	vars2	99	69.311	ENSPMGG00000000465	vars2	90	69.311	Periophthalmus_magnuspinnatus
ENSGMOG00000018960	vars2	99	55.836	ENSPEMG00000014691	Vars2	89	55.836	Peromyscus_maniculatus_bairdii
ENSGMOG00000018960	vars2	98	55.310	ENSPCIG00000015040	VARS2	89	55.310	Phascolarctos_cinereus
ENSGMOG00000018960	vars2	99	68.295	ENSPFOG00000017616	vars2	89	68.295	Poecilia_formosa
ENSGMOG00000018960	vars2	99	68.290	ENSPLAG00000019778	vars2	90	68.290	Poecilia_latipinna
ENSGMOG00000018960	vars2	99	68.083	ENSPMEG00000011123	vars2	89	68.083	Poecilia_mexicana
ENSGMOG00000018960	vars2	99	61.546	ENSPREG00000014998	vars2	91	61.546	Poecilia_reticulata
ENSGMOG00000018960	vars2	97	55.344	ENSPPYG00000016424	VARS2	89	55.450	Pongo_abelii
ENSGMOG00000018960	vars2	68	54.424	ENSPCAG00000006946	VARS2	61	54.424	Procavia_capensis
ENSGMOG00000018960	vars2	99	54.336	ENSPCOG00000014839	VARS2	86	54.336	Propithecus_coquereli
ENSGMOG00000018960	vars2	99	55.404	ENSPVAG00000004197	VARS2	88	55.404	Pteropus_vampyrus
ENSGMOG00000018960	vars2	92	77.898	ENSPNYG00000010314	vars2	97	77.898	Pundamilia_nyererei
ENSGMOG00000018960	vars2	100	69.806	ENSPNAG00000026793	vars2	90	69.806	Pygocentrus_nattereri
ENSGMOG00000018960	vars2	99	55.731	ENSRNOG00000000833	Vars2	89	55.731	Rattus_norvegicus
ENSGMOG00000018960	vars2	99	55.042	ENSRBIG00000032725	VARS2	88	55.147	Rhinopithecus_bieti
ENSGMOG00000018960	vars2	99	54.879	ENSRROG00000043847	VARS2	88	54.984	Rhinopithecus_roxellana
ENSGMOG00000018960	vars2	99	53.641	ENSSBOG00000033240	VARS2	87	53.641	Saimiri_boliviensis_boliviensis
ENSGMOG00000018960	vars2	99	54.366	ENSSHAG00000009307	VARS2	89	54.366	Sarcophilus_harrisii
ENSGMOG00000018960	vars2	100	68.756	ENSSFOG00015016187	vars2	90	68.756	Scleropages_formosus
ENSGMOG00000018960	vars2	93	81.481	ENSSMAG00000020842	vars2	89	81.481	Scophthalmus_maximus
ENSGMOG00000018960	vars2	99	72.569	ENSSDUG00000011598	vars2	90	72.569	Seriola_dumerili
ENSGMOG00000018960	vars2	98	73.890	ENSSLDG00000015492	vars2	89	73.890	Seriola_lalandi_dorsalis
ENSGMOG00000018960	vars2	55	60.741	ENSSARG00000003786	-	61	60.741	Sorex_araneus
ENSGMOG00000018960	vars2	87	61.098	ENSSPUG00000014700	VARS2	87	61.098	Sphenodon_punctatus
ENSGMOG00000018960	vars2	99	68.905	ENSSPAG00000004654	vars2	90	68.905	Stegastes_partitus
ENSGMOG00000018960	vars2	99	56.362	ENSSSCG00000001384	VARS2	92	57.359	Sus_scrofa
ENSGMOG00000018960	vars2	99	68.912	ENSTRUG00000005264	vars2	92	68.912	Takifugu_rubripes
ENSGMOG00000018960	vars2	99	68.492	ENSTNIG00000005916	vars2	90	69.112	Tetraodon_nigroviridis
ENSGMOG00000018960	vars2	91	49.432	ENSTTRG00000012243	VARS2	84	49.545	Tursiops_truncatus
ENSGMOG00000018960	vars2	98	55.626	ENSUAMG00000026124	VARS2	95	56.384	Ursus_americanus
ENSGMOG00000018960	vars2	98	56.000	ENSUMAG00000019894	VARS2	88	56.000	Ursus_maritimus
ENSGMOG00000018960	vars2	99	55.637	ENSVVUG00000010754	VARS2	85	55.637	Vulpes_vulpes
ENSGMOG00000018960	vars2	98	51.515	ENSXETG00000003036	vars2	99	51.515	Xenopus_tropicalis
ENSGMOG00000018960	vars2	99	69.916	ENSXCOG00000003455	vars2	92	69.916	Xiphophorus_couchianus
ENSGMOG00000018960	vars2	99	68.976	ENSXMAG00000013523	vars2	89	68.976	Xiphophorus_maculatus