EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSGMOG00000018995 (Gene tree)
Gene ID: -
Gene Symbol: smarcad1a
Alias: smarcad1|wu:fi25c01|zgc:113183
Full Name: SWI/SNF-related%2C matrix-associated actin-dependent regulator of chromatin%2C subfamily a%2C containing DEAD/H box 1 a
Gene Type: protein_coding
Species: Gadus_morhua
Status: putative
Strand: Minus strand
Length: 23818 bases
Position: chrGeneScaffold_3733:27345-51162
Accession: ZDB-GENE-050522-499
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSGMOP00000020436	ResIII	PF04851.15	2.4e-07	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSGMOT00000020937	-	2583	-	ENSGMOP00000020436	860 (aa)	-	UPI00023F4339

Gene Model

Click here to download ENSGMOG00000018995's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSGMOG00000018995's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSGMOG00000018995	smarcad1a	57	31.619	ENSGMOG00000014774	rad54b	57	32.000

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSGMOG00000018995	smarcad1a	97	57.604	ENSG00000163104	SMARCAD1	100	66.332	Homo_sapiens
ENSGMOG00000018995	smarcad1a	99	82.386	ENSAPOG00000011446	smarcad1a	82	82.411	Acanthochromis_polyacanthus
ENSGMOG00000018995	smarcad1a	97	57.604	ENSAMEG00000005844	SMARCAD1	84	58.180	Ailuropoda_melanoleuca
ENSGMOG00000018995	smarcad1a	88	76.556	ENSACIG00000018326	smarcad1a	95	81.818	Amphilophus_citrinellus
ENSGMOG00000018995	smarcad1a	99	82.837	ENSAOCG00000019762	smarcad1a	82	82.837	Amphiprion_ocellaris
ENSGMOG00000018995	smarcad1a	100	82.812	ENSAPEG00000003889	smarcad1a	82	82.837	Amphiprion_percula
ENSGMOG00000018995	smarcad1a	97	82.849	ENSATEG00000015608	smarcad1a	84	82.558	Anabas_testudineus
ENSGMOG00000018995	smarcad1a	97	56.912	ENSAPLG00000004630	SMARCAD1	89	56.747	Anas_platyrhynchos
ENSGMOG00000018995	smarcad1a	97	55.709	ENSACAG00000013554	SMARCAD1	84	55.889	Anolis_carolinensis
ENSGMOG00000018995	smarcad1a	97	57.488	ENSANAG00000020488	SMARCAD1	95	57.719	Aotus_nancymaae
ENSGMOG00000018995	smarcad1a	97	81.429	ENSACLG00000017063	smarcad1a	90	75.933	Astatotilapia_calliptera
ENSGMOG00000018995	smarcad1a	78	70.896	ENSAMXG00000015470	smarcad1a	92	71.429	Astyanax_mexicanus
ENSGMOG00000018995	smarcad1a	90	65.105	ENSAMXG00000019130	smarcad1b	86	65.675	Astyanax_mexicanus
ENSGMOG00000018995	smarcad1a	97	57.471	ENSBTAG00000017061	SMARCAD1	84	58.046	Bos_taurus
ENSGMOG00000018995	smarcad1a	75	40.000	WBGene00010845	M03C11.8	68	39.239	Caenorhabditis_elegans
ENSGMOG00000018995	smarcad1a	97	57.488	ENSCJAG00000006778	SMARCAD1	84	57.719	Callithrix_jacchus
ENSGMOG00000018995	smarcad1a	97	57.604	ENSCAFG00000010026	SMARCAD1	84	58.180	Canis_familiaris
ENSGMOG00000018995	smarcad1a	97	57.604	ENSCAFG00020003994	SMARCAD1	97	58.180	Canis_lupus_dingo
ENSGMOG00000018995	smarcad1a	97	57.719	ENSCHIG00000012905	SMARCAD1	84	58.295	Capra_hircus
ENSGMOG00000018995	smarcad1a	97	57.670	ENSTSYG00000002706	SMARCAD1	84	57.604	Carlito_syrichta
ENSGMOG00000018995	smarcad1a	92	50.741	ENSCAPG00000016744	SMARCAD1	89	51.530	Cavia_aperea
ENSGMOG00000018995	smarcad1a	97	57.258	ENSCPOG00000011398	SMARCAD1	83	58.180	Cavia_porcellus
ENSGMOG00000018995	smarcad1a	97	57.604	ENSCCAG00000022264	SMARCAD1	100	66.499	Cebus_capucinus
ENSGMOG00000018995	smarcad1a	97	57.719	ENSCATG00000035663	SMARCAD1	97	57.949	Cercocebus_atys
ENSGMOG00000018995	smarcad1a	95	57.497	ENSCSAG00000004186	SMARCAD1	100	57.733	Chlorocebus_sabaeus
ENSGMOG00000018995	smarcad1a	97	58.218	ENSCPBG00000013203	SMARCAD1	83	57.937	Chrysemys_picta_bellii
ENSGMOG00000018995	smarcad1a	77	47.845	ENSCING00000001688	-	97	48.686	Ciona_intestinalis
ENSGMOG00000018995	smarcad1a	97	57.719	ENSCANG00000003556	SMARCAD1	100	66.332	Colobus_angolensis_palliatus
ENSGMOG00000018995	smarcad1a	97	56.930	ENSCGRG00001015056	Smarcad1	84	57.604	Cricetulus_griseus_chok1gshd
ENSGMOG00000018995	smarcad1a	97	56.930	ENSCGRG00000014087	Smarcad1	84	57.604	Cricetulus_griseus_crigri
ENSGMOG00000018995	smarcad1a	98	77.778	ENSCSEG00000017903	smarcad1a	82	77.778	Cynoglossus_semilaevis
ENSGMOG00000018995	smarcad1a	97	76.869	ENSCSEG00000014419	-	88	74.560	Cynoglossus_semilaevis
ENSGMOG00000018995	smarcad1a	97	61.899	ENSDARG00000014041	smarcad1a	91	62.809	Danio_rerio
ENSGMOG00000018995	smarcad1a	92	64.555	ENSDARG00000073721	smarcad1b	85	64.799	Danio_rerio
ENSGMOG00000018995	smarcad1a	97	57.604	ENSDNOG00000000806	-	84	57.949	Dasypus_novemcinctus
ENSGMOG00000018995	smarcad1a	99	56.433	ENSDORG00000012331	Smarcad1	86	57.320	Dipodomys_ordii
ENSGMOG00000018995	smarcad1a	75	44.343	FBgn0032157	Etl1	78	43.844	Drosophila_melanogaster
ENSGMOG00000018995	smarcad1a	74	47.158	ENSEBUG00000003969	smarcad1a	93	48.440	Eptatretus_burgeri
ENSGMOG00000018995	smarcad1a	97	57.604	ENSEASG00005012382	SMARCAD1	86	57.032	Equus_asinus_asinus
ENSGMOG00000018995	smarcad1a	97	57.604	ENSECAG00000011562	SMARCAD1	84	58.180	Equus_caballus
ENSGMOG00000018995	smarcad1a	93	63.139	ENSELUG00000019154	smarcad1b	83	63.548	Esox_lucius
ENSGMOG00000018995	smarcad1a	97	70.264	ENSELUG00000018535	smarcad1a	88	69.934	Esox_lucius
ENSGMOG00000018995	smarcad1a	97	57.488	ENSFCAG00000003958	SMARCAD1	100	66.499	Felis_catus
ENSGMOG00000018995	smarcad1a	99	57.679	ENSFALG00000006089	SMARCAD1	85	57.486	Ficedula_albicollis
ENSGMOG00000018995	smarcad1a	97	57.143	ENSFDAG00000017027	SMARCAD1	84	57.949	Fukomys_damarensis
ENSGMOG00000018995	smarcad1a	96	76.605	ENSFHEG00000012778	smarcad1a	78	76.454	Fundulus_heteroclitus
ENSGMOG00000018995	smarcad1a	91	57.901	ENSGALG00000037339	SMARCAD1	96	57.797	Gallus_gallus
ENSGMOG00000018995	smarcad1a	95	76.748	ENSGAFG00000013498	smarcad1a	77	76.596	Gambusia_affinis
ENSGMOG00000018995	smarcad1a	100	75.143	ENSGACG00000007327	smarcad1a	100	75.258	Gasterosteus_aculeatus
ENSGMOG00000018995	smarcad1a	97	58.295	ENSGAGG00000008582	SMARCAD1	83	58.053	Gopherus_agassizii
ENSGMOG00000018995	smarcad1a	97	57.604	ENSGGOG00000023001	SMARCAD1	84	57.834	Gorilla_gorilla
ENSGMOG00000018995	smarcad1a	97	81.714	ENSHBUG00000011042	smarcad1a	80	81.714	Haplochromis_burtoni
ENSGMOG00000018995	smarcad1a	97	57.258	ENSHGLG00000005070	SMARCAD1	84	58.065	Heterocephalus_glaber_female
ENSGMOG00000018995	smarcad1a	97	57.258	ENSHGLG00100006812	SMARCAD1	84	58.065	Heterocephalus_glaber_male
ENSGMOG00000018995	smarcad1a	98	74.608	ENSHCOG00000007848	smarcad1a	86	73.603	Hippocampus_comes
ENSGMOG00000018995	smarcad1a	88	74.097	ENSIPUG00000000242	smarcad1a	81	72.054	Ictalurus_punctatus
ENSGMOG00000018995	smarcad1a	90	65.102	ENSIPUG00000022817	smarcad1b	85	65.530	Ictalurus_punctatus
ENSGMOG00000018995	smarcad1a	97	56.962	ENSSTOG00000001227	SMARCAD1	84	57.537	Ictidomys_tridecemlineatus
ENSGMOG00000018995	smarcad1a	97	56.995	ENSJJAG00000022342	Smarcad1	84	57.373	Jaculus_jaculus
ENSGMOG00000018995	smarcad1a	97	77.843	ENSKMAG00000021351	smarcad1a	87	76.312	Kryptolebias_marmoratus
ENSGMOG00000018995	smarcad1a	99	79.943	ENSLBEG00000008088	smarcad1a	91	79.858	Labrus_bergylta
ENSGMOG00000018995	smarcad1a	97	63.678	ENSLOCG00000012909	smarcad1a	88	64.509	Lepisosteus_oculatus
ENSGMOG00000018995	smarcad1a	97	56.682	ENSLAFG00000000040	SMARCAD1	84	57.258	Loxodonta_africana
ENSGMOG00000018995	smarcad1a	99	56.648	ENSMFAG00000042606	SMARCAD1	99	56.872	Macaca_fascicularis
ENSGMOG00000018995	smarcad1a	99	56.648	ENSMMUG00000022242	SMARCAD1	99	56.872	Macaca_mulatta
ENSGMOG00000018995	smarcad1a	97	57.719	ENSMNEG00000038117	SMARCAD1	99	66.555	Macaca_nemestrina
ENSGMOG00000018995	smarcad1a	97	57.719	ENSMLEG00000038333	SMARCAD1	100	66.332	Mandrillus_leucophaeus
ENSGMOG00000018995	smarcad1a	99	81.180	ENSMAMG00000000933	smarcad1a	84	81.180	Mastacembelus_armatus
ENSGMOG00000018995	smarcad1a	97	81.429	ENSMZEG00005005203	smarcad1a	90	75.933	Maylandia_zebra
ENSGMOG00000018995	smarcad1a	99	54.069	ENSMGAG00000005577	SMARCAD1	91	54.181	Meleagris_gallopavo
ENSGMOG00000018995	smarcad1a	97	57.719	ENSMAUG00000008417	Smarcad1	84	57.834	Mesocricetus_auratus
ENSGMOG00000018995	smarcad1a	97	57.011	ENSMICG00000009746	SMARCAD1	84	57.701	Microcebus_murinus
ENSGMOG00000018995	smarcad1a	97	56.701	ENSMOCG00000017142	Smarcad1	84	57.258	Microtus_ochrogaster
ENSGMOG00000018995	smarcad1a	90	76.093	ENSMMOG00000000275	smarcad1a	100	80.889	Mola_mola
ENSGMOG00000018995	smarcad1a	97	55.809	ENSMODG00000019268	SMARCAD1	84	56.782	Monodelphis_domestica
ENSGMOG00000018995	smarcad1a	96	58.000	MGP_CAROLIEiJ_G0028458	-	67	57.362	Mus_caroli
ENSGMOG00000018995	smarcad1a	97	58.035	ENSMUSG00000029920	Smarcad1	84	57.292	Mus_musculus
ENSGMOG00000018995	smarcad1a	97	57.706	MGP_PahariEiJ_G0022198	Smarcad1	84	56.961	Mus_pahari
ENSGMOG00000018995	smarcad1a	97	58.102	MGP_SPRETEiJ_G0029462	Smarcad1	84	57.358	Mus_spretus
ENSGMOG00000018995	smarcad1a	97	57.604	ENSMPUG00000002111	SMARCAD1	84	58.180	Mustela_putorius_furo
ENSGMOG00000018995	smarcad1a	97	57.356	ENSMLUG00000000425	SMARCAD1	84	57.931	Myotis_lucifugus
ENSGMOG00000018995	smarcad1a	97	56.651	ENSNGAG00000000810	Smarcad1	85	57.028	Nannospalax_galili
ENSGMOG00000018995	smarcad1a	80	80.842	ENSNBRG00000012749	smarcad1a	85	78.962	Neolamprologus_brichardi
ENSGMOG00000018995	smarcad1a	97	57.604	ENSNLEG00000014225	SMARCAD1	100	66.332	Nomascus_leucogenys
ENSGMOG00000018995	smarcad1a	97	58.016	ENSODEG00000004334	SMARCAD1	84	58.295	Octodon_degus
ENSGMOG00000018995	smarcad1a	99	71.091	ENSONIG00000015059	smarcad1a	90	73.648	Oreochromis_niloticus
ENSGMOG00000018995	smarcad1a	90	60.076	ENSOANG00000013764	SMARCAD1	95	60.076	Ornithorhynchus_anatinus
ENSGMOG00000018995	smarcad1a	97	56.682	ENSOCUG00000017283	SMARCAD1	84	57.373	Oryctolagus_cuniculus
ENSGMOG00000018995	smarcad1a	97	76.824	ENSORLG00000004869	smarcad1a	84	75.593	Oryzias_latipes
ENSGMOG00000018995	smarcad1a	97	76.967	ENSORLG00020020569	smarcad1a	83	75.804	Oryzias_latipes_hni
ENSGMOG00000018995	smarcad1a	97	77.253	ENSORLG00015009045	smarcad1a	84	76.011	Oryzias_latipes_hsok
ENSGMOG00000018995	smarcad1a	98	77.208	ENSOMEG00000023032	smarcad1a	83	76.117	Oryzias_melastigma
ENSGMOG00000018995	smarcad1a	97	56.617	ENSOGAG00000011444	SMARCAD1	84	57.192	Otolemur_garnettii
ENSGMOG00000018995	smarcad1a	97	57.719	ENSOARG00000017851	SMARCAD1	84	58.295	Ovis_aries
ENSGMOG00000018995	smarcad1a	97	57.604	ENSPPAG00000035715	SMARCAD1	84	57.834	Pan_paniscus
ENSGMOG00000018995	smarcad1a	97	57.488	ENSPPRG00000024756	SMARCAD1	100	66.499	Panthera_pardus
ENSGMOG00000018995	smarcad1a	97	57.356	ENSPTIG00000017868	SMARCAD1	84	57.931	Panthera_tigris_altaica
ENSGMOG00000018995	smarcad1a	97	57.604	ENSPTRG00000023126	SMARCAD1	100	66.332	Pan_troglodytes
ENSGMOG00000018995	smarcad1a	97	56.487	ENSPANG00000019757	SMARCAD1	84	56.716	Papio_anubis
ENSGMOG00000018995	smarcad1a	97	57.639	ENSPSIG00000010255	SMARCAD1	83	57.773	Pelodiscus_sinensis
ENSGMOG00000018995	smarcad1a	75	75.349	ENSPMGG00000010735	smarcad1a	93	74.169	Periophthalmus_magnuspinnatus
ENSGMOG00000018995	smarcad1a	97	50.289	ENSPEMG00000001854	Smarcad1	85	50.519	Peromyscus_maniculatus_bairdii
ENSGMOG00000018995	smarcad1a	97	49.379	ENSPMAG00000003516	smarcad1a	87	49.602	Petromyzon_marinus
ENSGMOG00000018995	smarcad1a	89	59.645	ENSPCIG00000008137	SMARCAD1	96	59.848	Phascolarctos_cinereus
ENSGMOG00000018995	smarcad1a	98	79.315	ENSPFOG00000019116	smarcad1a	87	76.694	Poecilia_formosa
ENSGMOG00000018995	smarcad1a	97	79.173	ENSPLAG00000000108	smarcad1a	84	79.007	Poecilia_latipinna
ENSGMOG00000018995	smarcad1a	98	79.315	ENSPMEG00000009155	smarcad1a	84	79.149	Poecilia_mexicana
ENSGMOG00000018995	smarcad1a	97	79.743	ENSPREG00000018185	smarcad1a	88	77.100	Poecilia_reticulata
ENSGMOG00000018995	smarcad1a	97	57.126	ENSPPYG00000014935	SMARCAD1	84	57.356	Pongo_abelii
ENSGMOG00000018995	smarcad1a	91	48.878	ENSPCOG00000020478	SMARCAD1	89	49.127	Propithecus_coquereli
ENSGMOG00000018995	smarcad1a	97	57.028	ENSPVAG00000001760	SMARCAD1	84	57.604	Pteropus_vampyrus
ENSGMOG00000018995	smarcad1a	80	80.318	ENSPNYG00000010087	smarcad1a	85	78.401	Pundamilia_nyererei
ENSGMOG00000018995	smarcad1a	93	64.423	ENSPNAG00000010099	smarcad1b	89	64.423	Pygocentrus_nattereri
ENSGMOG00000018995	smarcad1a	100	61.707	ENSPNAG00000001663	smarcad1a	93	61.379	Pygocentrus_nattereri
ENSGMOG00000018995	smarcad1a	97	57.737	ENSRNOG00000006391	Smarcad1	84	57.126	Rattus_norvegicus
ENSGMOG00000018995	smarcad1a	97	57.719	ENSRBIG00000041989	SMARCAD1	84	57.949	Rhinopithecus_bieti
ENSGMOG00000018995	smarcad1a	97	57.719	ENSRROG00000035309	SMARCAD1	84	57.949	Rhinopithecus_roxellana
ENSGMOG00000018995	smarcad1a	97	57.604	ENSSBOG00000032114	SMARCAD1	100	66.499	Saimiri_boliviensis_boliviensis
ENSGMOG00000018995	smarcad1a	97	57.044	ENSSHAG00000001279	SMARCAD1	84	56.928	Sarcophilus_harrisii
ENSGMOG00000018995	smarcad1a	87	67.497	ENSSFOG00015020909	smarcad1a	100	67.060	Scleropages_formosus
ENSGMOG00000018995	smarcad1a	97	64.191	ENSSFOG00015016814	smarcad1b	90	63.221	Scleropages_formosus
ENSGMOG00000018995	smarcad1a	96	82.051	ENSSMAG00000001326	smarcad1a	81	80.223	Scophthalmus_maximus
ENSGMOG00000018995	smarcad1a	82	81.392	ENSSDUG00000022338	smarcad1a	85	79.805	Seriola_dumerili
ENSGMOG00000018995	smarcad1a	98	80.627	ENSSLDG00000024986	smarcad1a	81	80.170	Seriola_lalandi_dorsalis
ENSGMOG00000018995	smarcad1a	69	66.946	ENSSPUG00000004633	SMARCAD1	99	66.946	Sphenodon_punctatus
ENSGMOG00000018995	smarcad1a	99	82.670	ENSSPAG00000001970	smarcad1a	82	82.695	Stegastes_partitus
ENSGMOG00000018995	smarcad1a	97	57.949	ENSSSCG00000009193	SMARCAD1	100	58.323	Sus_scrofa
ENSGMOG00000018995	smarcad1a	89	59.091	ENSTGUG00000003127	SMARCAD1	100	59.593	Taeniopygia_guttata
ENSGMOG00000018995	smarcad1a	99	74.658	ENSTNIG00000017585	smarcad1a	99	74.658	Tetraodon_nigroviridis
ENSGMOG00000018995	smarcad1a	88	68.317	ENSTBEG00000002789	SMARCAD1	77	68.317	Tupaia_belangeri
ENSGMOG00000018995	smarcad1a	97	58.295	ENSTTRG00000000226	SMARCAD1	86	58.228	Tursiops_truncatus
ENSGMOG00000018995	smarcad1a	97	57.719	ENSUAMG00000022262	SMARCAD1	84	58.295	Ursus_americanus
ENSGMOG00000018995	smarcad1a	97	57.604	ENSUMAG00000004549	SMARCAD1	84	58.180	Ursus_maritimus
ENSGMOG00000018995	smarcad1a	97	57.604	ENSVVUG00000007271	SMARCAD1	100	57.969	Vulpes_vulpes
ENSGMOG00000018995	smarcad1a	97	52.787	ENSXETG00000019214	smarcad1	99	53.129	Xenopus_tropicalis
ENSGMOG00000018995	smarcad1a	88	76.610	ENSXCOG00000005232	smarcad1a	89	71.705	Xiphophorus_couchianus
ENSGMOG00000018995	smarcad1a	97	79.315	ENSXMAG00000015350	smarcad1a	79	78.865	Xiphophorus_maculatus