EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSGMOG00000019009 (Gene tree)
Gene ID: -
Gene Symbol: zgc:171480
Alias: -
Full Name: zgc:171480
Gene Type: protein_coding
Species: Gadus_morhua
Status: putative
Strand: Plus strand
Length: 436 bases
Position: chrGeneScaffold_2170:2847-3282
Accession: ZDB-GENE-080204-83
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSGMOP00000020432	Mitoc_L55	PF09776.9	1.7e-41	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSGMOT00000020933	-	309	-	ENSGMOP00000020432	102 (aa)	-	UPI00023F49C1

Gene Model

Click here to download ENSGMOG00000019009's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSGMOG00000019009's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSGMOG00000019009	zgc:171480	100	70.588	ENSAPOG00000002881	zgc:171480	71	70.588	Acanthochromis_polyacanthus
ENSGMOG00000019009	zgc:171480	100	69.608	ENSACIG00000001646	zgc:171480	75	69.608	Amphilophus_citrinellus
ENSGMOG00000019009	zgc:171480	100	72.549	ENSAOCG00000016155	zgc:171480	71	72.549	Amphiprion_ocellaris
ENSGMOG00000019009	zgc:171480	100	72.549	ENSAPEG00000022327	zgc:171480	71	72.549	Amphiprion_percula
ENSGMOG00000019009	zgc:171480	99	71.287	ENSATEG00000005625	zgc:171480	69	71.287	Anabas_testudineus
ENSGMOG00000019009	zgc:171480	98	58.416	ENSACAG00000006897	-	80	58.416	Anolis_carolinensis
ENSGMOG00000019009	zgc:171480	99	68.317	ENSACLG00000005172	zgc:171480	73	68.317	Astatotilapia_calliptera
ENSGMOG00000019009	zgc:171480	97	69.697	ENSAMXG00000043839	zgc:171480	76	69.697	Astyanax_mexicanus
ENSGMOG00000019009	zgc:171480	98	60.000	ENSCPBG00000001771	-	80	60.000	Chrysemys_picta_bellii
ENSGMOG00000019009	zgc:171480	98	67.000	ENSCSEG00000019533	zgc:171480	72	67.000	Cynoglossus_semilaevis
ENSGMOG00000019009	zgc:171480	98	68.000	ENSDARG00000043402	zgc:171480	75	68.000	Danio_rerio
ENSGMOG00000019009	zgc:171480	97	62.000	ENSELUG00000007716	zgc:171480	76	62.000	Esox_lucius
ENSGMOG00000019009	zgc:171480	89	51.648	ENSFALG00000001083	-	94	51.648	Ficedula_albicollis
ENSGMOG00000019009	zgc:171480	100	66.667	ENSFHEG00000000203	zgc:171480	73	66.667	Fundulus_heteroclitus
ENSGMOG00000019009	zgc:171480	97	51.515	ENSGALG00000038820	-	87	53.535	Gallus_gallus
ENSGMOG00000019009	zgc:171480	100	67.647	ENSGAFG00000004832	-	71	67.647	Gambusia_affinis
ENSGMOG00000019009	zgc:171480	90	80.435	ENSGACG00000002136	zgc:171480	100	80.435	Gasterosteus_aculeatus
ENSGMOG00000019009	zgc:171480	98	56.000	ENSGAGG00000001806	-	81	56.000	Gopherus_agassizii
ENSGMOG00000019009	zgc:171480	99	68.317	ENSHBUG00000007895	zgc:171480	73	68.317	Haplochromis_burtoni
ENSGMOG00000019009	zgc:171480	90	79.348	ENSHCOG00000003526	zgc:171480	51	79.348	Hippocampus_comes
ENSGMOG00000019009	zgc:171480	97	65.000	ENSIPUG00000001273	mrpl55	76	65.000	Ictalurus_punctatus
ENSGMOG00000019009	zgc:171480	100	67.647	ENSKMAG00000002011	zgc:171480	80	67.647	Kryptolebias_marmoratus
ENSGMOG00000019009	zgc:171480	100	75.490	ENSLBEG00000010915	zgc:171480	81	75.490	Labrus_bergylta
ENSGMOG00000019009	zgc:171480	100	75.490	ENSLBEG00000016107	-	81	75.490	Labrus_bergylta
ENSGMOG00000019009	zgc:171480	100	65.049	ENSLACG00000016281	zgc:171480	78	65.049	Latimeria_chalumnae
ENSGMOG00000019009	zgc:171480	100	71.569	ENSMAMG00000022250	zgc:171480	69	71.569	Mastacembelus_armatus
ENSGMOG00000019009	zgc:171480	99	68.317	ENSMZEG00005015585	zgc:171480	73	68.317	Maylandia_zebra
ENSGMOG00000019009	zgc:171480	97	51.515	ENSMGAG00000002612	-	87	51.515	Meleagris_gallopavo
ENSGMOG00000019009	zgc:171480	100	52.941	ENSMMOG00000008740	-	77	52.941	Mola_mola
ENSGMOG00000019009	zgc:171480	100	68.627	ENSMALG00000019823	zgc:171480	81	68.627	Monopterus_albus
ENSGMOG00000019009	zgc:171480	99	67.327	ENSNBRG00000019447	zgc:171480	73	67.327	Neolamprologus_brichardi
ENSGMOG00000019009	zgc:171480	99	70.297	ENSONIG00000007645	zgc:171480	75	70.297	Oreochromis_niloticus
ENSGMOG00000019009	zgc:171480	99	66.337	ENSORLG00020006963	zgc:171480	75	66.337	Oryzias_latipes_hni
ENSGMOG00000019009	zgc:171480	99	67.327	ENSORLG00015003266	zgc:171480	75	67.327	Oryzias_latipes_hsok
ENSGMOG00000019009	zgc:171480	98	68.000	ENSOMEG00000008184	zgc:171480	73	68.000	Oryzias_melastigma
ENSGMOG00000019009	zgc:171480	97	63.000	ENSPKIG00000006753	zgc:171480	78	63.000	Paramormyrops_kingsleyae
ENSGMOG00000019009	zgc:171480	98	56.000	ENSPSIG00000010893	-	80	56.000	Pelodiscus_sinensis
ENSGMOG00000019009	zgc:171480	98	63.366	ENSPMGG00000012657	-	78	63.366	Periophthalmus_magnuspinnatus
ENSGMOG00000019009	zgc:171480	91	51.579	ENSPMAG00000000867	zgc:171480	82	51.042	Petromyzon_marinus
ENSGMOG00000019009	zgc:171480	97	53.000	ENSPCIG00000021848	-	79	53.000	Phascolarctos_cinereus
ENSGMOG00000019009	zgc:171480	100	66.667	ENSPFOG00000012703	zgc:171480	73	66.667	Poecilia_formosa
ENSGMOG00000019009	zgc:171480	100	67.647	ENSPREG00000020328	zgc:171480	73	67.647	Poecilia_reticulata
ENSGMOG00000019009	zgc:171480	97	66.000	ENSPNAG00000017309	zgc:171480	76	66.000	Pygocentrus_nattereri
ENSGMOG00000019009	zgc:171480	97	67.000	ENSSFOG00015015668	mrpl55	76	67.000	Scleropages_formosus
ENSGMOG00000019009	zgc:171480	100	71.569	ENSSMAG00000005429	zgc:171480	73	71.569	Scophthalmus_maximus
ENSGMOG00000019009	zgc:171480	100	73.529	ENSSDUG00000022556	zgc:171480	69	73.529	Seriola_dumerili
ENSGMOG00000019009	zgc:171480	100	74.510	ENSSLDG00000019598	zgc:171480	69	74.510	Seriola_lalandi_dorsalis
ENSGMOG00000019009	zgc:171480	98	56.000	ENSSPUG00000000735	-	80	56.000	Sphenodon_punctatus
ENSGMOG00000019009	zgc:171480	100	72.549	ENSSPAG00000011598	zgc:171480	72	72.549	Stegastes_partitus
ENSGMOG00000019009	zgc:171480	100	68.627	ENSTRUG00000003082	zgc:171480	72	68.627	Takifugu_rubripes
ENSGMOG00000019009	zgc:171480	96	67.347	ENSXCOG00000005887	zgc:171480	80	67.347	Xiphophorus_couchianus
ENSGMOG00000019009	zgc:171480	100	66.667	ENSXMAG00000007937	zgc:171480	73	66.667	Xiphophorus_maculatus