EuRBPDB

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  • Description
  • RBDs
  • Transcripts
  • Gene Model
  • PPI
  • Paralogs
  • Orthologs
Description
Ensembl ID
ENSGMOG00000019025 (Gene tree)
Gene ID
-
Gene Symbol
pabpc4
Alias
cb12|sb:cb12
Full Name
poly(A) binding protein%2C cytoplasmic 4 (inducible form)
Gene Type
protein_coding
Species
Gadus_morhua
Status
putative
Strand
Minus strand
Length
9467 bases
Position
chrGeneScaffold_1441:858216-867682
Accession
ZDB-GENE-030131-9663
RBP type
canonical RBP
Summary
-
RNA binding domains(RBDs)
Protein IDDomain Pfam IDE-value Domain number Total number
ENSGMOP00000020460PABPPF00658.181.9e-3111
ENSGMOP00000020460RRM_5PF13893.63.3e-0911
ENSGMOP00000020460RRM_1PF00076.224.8e-8914
ENSGMOP00000020460RRM_1PF00076.224.8e-8924
ENSGMOP00000020460RRM_1PF00076.224.8e-8934
ENSGMOP00000020460RRM_1PF00076.224.8e-8944
Transcripts
Transcript IDNameLengthRefSeq ID Protein IDLengthRefSeq IDUniportKB ID
ENSGMOT00000020961-1911-ENSGMOP00000020460636 (aa)-UPI00023F4348
Gene Model
Click here to download ENSGMOG00000019025's gene model file
Protein-Protein Interaction (PPI)

Clik here to download ENSGMOG00000019025's network
Paralogs
Ensembl IDGene SymbolCoverageIdentiy ParalogGene SymbolCoverageIdentiy
ENSGMOG00000019025pabpc45631.646ENSGMOG00000009633rbm14b6731.646
ENSGMOG00000019025pabpc45237.500ENSGMOG00000010163-5737.500
ENSGMOG00000019025pabpc49874.143ENSGMOG00000013448pabpc1a9973.676
ENSGMOG00000019025pabpc45830.189ENSGMOG00000001341ncl5430.566
ENSGMOG00000019025pabpc45933.981ENSGMOG00000005250rbms2b5233.981
ENSGMOG00000019025pabpc46231.492ENSGMOG00000008843tia18031.492
ENSGMOG00000019025pabpc45836.145ENSGMOG00000003760elavl39236.145
ENSGMOG00000019025pabpc45937.349ENSGMOG00000011182ELAVL29237.349
ENSGMOG00000019025pabpc49765.590ENSGMOG00000004437pabpc1l9865.428
ENSGMOG00000019025pabpc45740.984ENSGMOG00000002519sf3b45340.984
ENSGMOG00000019025pabpc45332.558ENSGMOG00000014008-5431.852
ENSGMOG00000019025pabpc45834.940ENSGMOG00000006515elavl49134.940
ENSGMOG00000019025pabpc45730.627ENSGMOG00000008423tia1l7030.627
ENSGMOG00000019025pabpc49770.541ENSGMOG00000002448-9970.541
Orthologs
Ensembl IDGene SymbolCoverageIdentiy OrthologGene SymbolCoverageIdentiy Species
ENSGMOG00000019025pabpc49983.438ENSG00000090621PABPC49996.396Homo_sapiens
ENSGMOG00000019025pabpc49992.516ENSAPOG00000001161pabpc410092.151Acanthochromis_polyacanthus
ENSGMOG00000019025pabpc49979.789ENSAMEG00000011535-9979.066Ailuropoda_melanoleuca
ENSGMOG00000019025pabpc49849.126ENSAMEG00000015083-9948.808Ailuropoda_melanoleuca
ENSGMOG00000019025pabpc410091.366ENSACIG00000023343pabpc410091.366Amphilophus_citrinellus
ENSGMOG00000019025pabpc49992.197ENSAOCG00000021529pabpc410091.837Amphiprion_ocellaris
ENSGMOG00000019025pabpc49992.197ENSAPEG00000019196pabpc410091.837Amphiprion_percula
ENSGMOG00000019025pabpc49991.097ENSATEG00000007402pabpc410090.596Anabas_testudineus
ENSGMOG00000019025pabpc49885.280ENSAPLG00000009729-10084.640Anas_platyrhynchos
ENSGMOG00000019025pabpc49883.865ENSACAG00000002544PABPC410083.156Anolis_carolinensis
ENSGMOG00000019025pabpc49983.438ENSANAG00000025079PABPC49982.808Aotus_nancymaae
ENSGMOG00000019025pabpc410091.223ENSACLG00000019558pabpc410091.223Astatotilapia_calliptera
ENSGMOG00000019025pabpc49983.491ENSAMXG00000018779pabpc410083.491Astyanax_mexicanus
ENSGMOG00000019025pabpc49980.277ENSBTAG00000017125PABPC49980.740Bos_taurus
ENSGMOG00000019025pabpc45783.929ENSBTAG00000048536-9383.929Bos_taurus
ENSGMOG00000019025pabpc47971.374ENSCJAG00000045953-9769.847Callithrix_jacchus
ENSGMOG00000019025pabpc49983.281ENSCJAG00000002512-9982.650Callithrix_jacchus
ENSGMOG00000019025pabpc49983.438ENSCAFG00000003081PABPC49982.808Canis_familiaris
ENSGMOG00000019025pabpc49979.940ENSCAFG00020004161PABPC49979.217Canis_lupus_dingo
ENSGMOG00000019025pabpc49979.789ENSCHIG00000019398-9979.066Capra_hircus
ENSGMOG00000019025pabpc49865.149ENSCHIG00000023385-9964.678Capra_hircus
ENSGMOG00000019025pabpc49983.438ENSTSYG00000006532PABPC49982.808Carlito_syrichta
ENSGMOG00000019025pabpc49883.043ENSCAPG00000015984PABPC49982.884Cavia_aperea
ENSGMOG00000019025pabpc49983.123ENSCPOG00000009552PABPC49982.965Cavia_porcellus
ENSGMOG00000019025pabpc49983.438ENSCCAG00000037306PABPC49982.808Cebus_capucinus
ENSGMOG00000019025pabpc49983.596ENSCATG00000042164PABPC49982.965Cercocebus_atys
ENSGMOG00000019025pabpc49982.965ENSCLAG00000011899PABPC49982.808Chinchilla_lanigera
ENSGMOG00000019025pabpc49979.940ENSCSAG00000001135PABPC49979.336Chlorocebus_sabaeus
ENSGMOG00000019025pabpc48488.421ENSCHOG00000005327PABPC47988.949Choloepus_hoffmanni
ENSGMOG00000019025pabpc49984.906ENSCPBG00000001038PABPC410084.277Chrysemys_picta_bellii
ENSGMOG00000019025pabpc49883.814ENSCANG00000034177PABPC49983.173Colobus_angolensis_palliatus
ENSGMOG00000019025pabpc49883.333ENSCGRG00001018166Pabpc410082.261Cricetulus_griseus_chok1gshd
ENSGMOG00000019025pabpc49783.713ENSCGRG00000009777Pabpc410082.616Cricetulus_griseus_crigri
ENSGMOG00000019025pabpc410090.282ENSCSEG00000000130pabpc410090.282Cynoglossus_semilaevis
ENSGMOG00000019025pabpc49891.011ENSCVAG00000019246pabpc49991.011Cyprinodon_variegatus
ENSGMOG00000019025pabpc49890.909ENSDARG00000059259pabpc410090.744Danio_rerio
ENSGMOG00000019025pabpc49882.562ENSDNOG00000018444-9981.705Dasypus_novemcinctus
ENSGMOG00000019025pabpc49980.710ENSDORG00000011581Pabpc49981.173Dipodomys_ordii
ENSGMOG00000019025pabpc49989.231ENSETEG00000018453-8489.231Echinops_telfairi
ENSGMOG00000019025pabpc48553.945ENSETEG00000009172-9952.000Echinops_telfairi
ENSGMOG00000019025pabpc49776.083ENSEBUG00000000992pabpc49975.762Eptatretus_burgeri
ENSGMOG00000019025pabpc49577.011ENSEBUG00000013782pabpc49976.367Eptatretus_burgeri
ENSGMOG00000019025pabpc49979.940ENSEASG00005014119PABPC49979.217Equus_asinus_asinus
ENSGMOG00000019025pabpc49979.940ENSECAG00000009396PABPC49979.217Equus_caballus
ENSGMOG00000019025pabpc49779.173ENSEEUG00000002962PABPC49978.130Erinaceus_europaeus
ENSGMOG00000019025pabpc49891.083ENSELUG00000003195pabpc410090.141Esox_lucius
ENSGMOG00000019025pabpc49983.438ENSFCAG00000015254-9982.808Felis_catus
ENSGMOG00000019025pabpc49985.197ENSFALG00000000543PABPC410084.567Ficedula_albicollis
ENSGMOG00000019025pabpc48951.695ENSFDAG00000010581-9949.914Fukomys_damarensis
ENSGMOG00000019025pabpc49979.940ENSFDAG00000020016-9979.487Fukomys_damarensis
ENSGMOG00000019025pabpc49991.209ENSFHEG00000007548pabpc410091.209Fundulus_heteroclitus
ENSGMOG00000019025pabpc49985.647ENSGALG00000003800PABPC49985.016Gallus_gallus
ENSGMOG00000019025pabpc49989.796ENSGAFG00000018195pabpc49898.889Gambusia_affinis
ENSGMOG00000019025pabpc410090.596ENSGACG00000007179pabpc410090.767Gasterosteus_aculeatus
ENSGMOG00000019025pabpc49985.063ENSGAGG00000001888PABPC410084.434Gopherus_agassizii
ENSGMOG00000019025pabpc49983.438ENSGGOG00000004002PABPC49982.808Gorilla_gorilla
ENSGMOG00000019025pabpc410091.223ENSHBUG00000020206pabpc410091.223Haplochromis_burtoni
ENSGMOG00000019025pabpc49983.123ENSHGLG00000011162PABPC49982.965Heterocephalus_glaber_female
ENSGMOG00000019025pabpc49983.123ENSHGLG00100001580PABPC49982.965Heterocephalus_glaber_male
ENSGMOG00000019025pabpc410089.969ENSHCOG00000012694pabpc410090.909Hippocampus_comes
ENSGMOG00000019025pabpc49789.211ENSIPUG00000016620pabpc49988.626Ictalurus_punctatus
ENSGMOG00000019025pabpc49983.175ENSSTOG00000010416PABPC49982.409Ictidomys_tridecemlineatus
ENSGMOG00000019025pabpc49979.289ENSJJAG00000007781Pabpc49979.630Jaculus_jaculus
ENSGMOG00000019025pabpc49990.252ENSKMAG00000013597pabpc410090.252Kryptolebias_marmoratus
ENSGMOG00000019025pabpc410090.909ENSLBEG00000013654pabpc49990.909Labrus_bergylta
ENSGMOG00000019025pabpc49984.772ENSLACG00000011907PABPC410084.301Latimeria_chalumnae
ENSGMOG00000019025pabpc49988.486ENSLOCG00000001877pabpc49988.486Lepisosteus_oculatus
ENSGMOG00000019025pabpc49983.201ENSLAFG00000000151PABPC49982.567Loxodonta_africana
ENSGMOG00000019025pabpc49983.596ENSMFAG00000041481PABPC49982.965Macaca_fascicularis
ENSGMOG00000019025pabpc49979.940ENSMMUG00000007497PABPC49979.336Macaca_mulatta
ENSGMOG00000019025pabpc49983.596ENSMNEG00000043054PABPC49982.965Macaca_nemestrina
ENSGMOG00000019025pabpc49983.596ENSMLEG00000040716PABPC49982.965Mandrillus_leucophaeus
ENSGMOG00000019025pabpc49991.733ENSMAMG00000010025pabpc410091.066Mastacembelus_armatus
ENSGMOG00000019025pabpc410091.066ENSMZEG00005006141pabpc410091.066Maylandia_zebra
ENSGMOG00000019025pabpc49881.619ENSMGAG00000005408PABPC410080.743Meleagris_gallopavo
ENSGMOG00000019025pabpc45780.117ENSMAUG00000004089-9280.117Mesocricetus_auratus
ENSGMOG00000019025pabpc47689.583ENSMAUG00000019763-8485.321Mesocricetus_auratus
ENSGMOG00000019025pabpc47179.048ENSMAUG00000001295-9778.095Mesocricetus_auratus
ENSGMOG00000019025pabpc48882.740ENSMICG00000016633-10082.270Microcebus_murinus
ENSGMOG00000019025pabpc49873.440ENSMICG00000036729-9972.193Microcebus_murinus
ENSGMOG00000019025pabpc49884.127ENSMOCG00000006763Pabpc410082.995Microtus_ochrogaster
ENSGMOG00000019025pabpc410087.284ENSMMOG00000002363pabpc410087.912Mola_mola
ENSGMOG00000019025pabpc45968.533ENSMODG00000018051-9668.533Monodelphis_domestica
ENSGMOG00000019025pabpc49782.000ENSMODG00000017657-10080.665Monodelphis_domestica
ENSGMOG00000019025pabpc49990.808ENSMALG00000011017pabpc410090.156Monopterus_albus
ENSGMOG00000019025pabpc49868.844MGP_CAROLIEiJ_G0024864-10072.174Mus_caroli
ENSGMOG00000019025pabpc49979.341MGP_CAROLIEiJ_G0026435-10096.454Mus_caroli
ENSGMOG00000019025pabpc410082.575ENSMUSG00000011257Pabpc410094.083Mus_musculus
ENSGMOG00000019025pabpc49979.728MGP_PahariEiJ_G0028765Pabpc410097.163Mus_pahari
ENSGMOG00000019025pabpc49969.565MGP_SPRETEiJ_G0027415Pabpc410097.163Mus_spretus
ENSGMOG00000019025pabpc49979.940ENSMPUG00000014414-9979.217Mustela_putorius_furo
ENSGMOG00000019025pabpc49445.752ENSMPUG00000006836-10045.351Mustela_putorius_furo
ENSGMOG00000019025pabpc410082.732ENSMLUG00000012068PABPC410082.104Myotis_lucifugus
ENSGMOG00000019025pabpc49983.201ENSNGAG00000018292Pabpc49982.567Nannospalax_galili
ENSGMOG00000019025pabpc46495.181ENSNBRG00000010047-7295.181Neolamprologus_brichardi
ENSGMOG00000019025pabpc45995.192ENSNBRG00000009708pabpc49895.192Neolamprologus_brichardi
ENSGMOG00000019025pabpc49983.596ENSNLEG00000011928PABPC49982.965Nomascus_leucogenys
ENSGMOG00000019025pabpc48490.476ENSOPRG00000011984PABPC48690.476Ochotona_princeps
ENSGMOG00000019025pabpc49982.808ENSODEG00000006592-9982.177Octodon_degus
ENSGMOG00000019025pabpc49774.153ENSODEG00000017434-9973.729Octodon_degus
ENSGMOG00000019025pabpc45282.857ENSODEG00000013457-10082.857Octodon_degus
ENSGMOG00000019025pabpc410091.066ENSONIG00000008176pabpc410091.066Oreochromis_niloticus
ENSGMOG00000019025pabpc49984.858ENSOANG00000010001PABPC49984.227Ornithorhynchus_anatinus
ENSGMOG00000019025pabpc49580.251ENSOCUG00000000562PABPC48879.624Oryctolagus_cuniculus
ENSGMOG00000019025pabpc49994.154ENSORLG00000017479pabpc49994.154Oryzias_latipes
ENSGMOG00000019025pabpc49994.154ENSORLG00020018644pabpc49994.154Oryzias_latipes_hni
ENSGMOG00000019025pabpc49994.154ENSORLG00015015042pabpc49994.154Oryzias_latipes_hsok
ENSGMOG00000019025pabpc49990.461ENSOMEG00000014410pabpc410089.984Oryzias_melastigma
ENSGMOG00000019025pabpc49980.462ENSOGAG00000004067PABPC49980.645Otolemur_garnettii
ENSGMOG00000019025pabpc49979.789ENSOARG00000020060PABPC49979.066Ovis_aries
ENSGMOG00000019025pabpc49983.438ENSPPAG00000043625PABPC49982.808Pan_paniscus
ENSGMOG00000019025pabpc49983.438ENSPPRG00000024727PABPC49982.808Panthera_pardus
ENSGMOG00000019025pabpc49983.438ENSPTIG00000005829PABPC49982.808Panthera_tigris_altaica
ENSGMOG00000019025pabpc49983.438ENSPTRG00000000573PABPC49982.808Pan_troglodytes
ENSGMOG00000019025pabpc49983.596ENSPANG00000009484PABPC49982.965Papio_anubis
ENSGMOG00000019025pabpc49988.522ENSPKIG00000025356pabpc410088.088Paramormyrops_kingsleyae
ENSGMOG00000019025pabpc49985.377ENSPSIG00000016892PABPC410084.748Pelodiscus_sinensis
ENSGMOG00000019025pabpc410087.264ENSPMGG00000009073pabpc410086.635Periophthalmus_magnuspinnatus
ENSGMOG00000019025pabpc49981.106ENSPEMG00000023569-9983.019Peromyscus_maniculatus_bairdii
ENSGMOG00000019025pabpc49980.280ENSPEMG00000024193-9979.782Peromyscus_maniculatus_bairdii
ENSGMOG00000019025pabpc48774.737ENSPMAG00000002836pabpc49975.614Petromyzon_marinus
ENSGMOG00000019025pabpc49571.605ENSPMAG00000007885pabpc49970.683Petromyzon_marinus
ENSGMOG00000019025pabpc49784.936ENSPCIG00000020674PABPC410092.233Phascolarctos_cinereus
ENSGMOG00000019025pabpc49990.581ENSPFOG00000002682pabpc410090.581Poecilia_formosa
ENSGMOG00000019025pabpc49990.424ENSPLAG00000010112pabpc410090.424Poecilia_latipinna
ENSGMOG00000019025pabpc49891.069ENSPMEG00000019739pabpc410090.424Poecilia_mexicana
ENSGMOG00000019025pabpc49990.424ENSPREG00000001589pabpc410090.424Poecilia_reticulata
ENSGMOG00000019025pabpc49979.789ENSPPYG00000001506PABPC49979.186Pongo_abelii
ENSGMOG00000019025pabpc49975.000ENSPCAG00000003341PABPC49974.398Procavia_capensis
ENSGMOG00000019025pabpc49982.862ENSPCOG00000023725-9982.835Propithecus_coquereli
ENSGMOG00000019025pabpc49867.018ENSPCOG00000025882-9581.633Propithecus_coquereli
ENSGMOG00000019025pabpc49778.727ENSPVAG00000002187PABPC49978.057Pteropus_vampyrus
ENSGMOG00000019025pabpc410091.223ENSPNYG00000006134pabpc410091.223Pundamilia_nyererei
ENSGMOG00000019025pabpc49990.679ENSPNAG00000024355pabpc49990.679Pygocentrus_nattereri
ENSGMOG00000019025pabpc410078.135ENSRNOG00000028592AABR07035074.110078.593Rattus_norvegicus
ENSGMOG00000019025pabpc410080.275ENSRNOG00000015642Pabpc410080.734Rattus_norvegicus
ENSGMOG00000019025pabpc49983.596ENSRBIG00000039761PABPC49982.965Rhinopithecus_bieti
ENSGMOG00000019025pabpc49983.596ENSRROG00000033355PABPC49982.965Rhinopithecus_roxellana
ENSGMOG00000019025pabpc49983.438ENSSBOG00000026193PABPC49982.808Saimiri_boliviensis_boliviensis
ENSGMOG00000019025pabpc49784.936ENSSHAG00000018139PABPC410083.491Sarcophilus_harrisii
ENSGMOG00000019025pabpc49987.908ENSSFOG00015023514pabpc410087.908Scleropages_formosus
ENSGMOG00000019025pabpc49991.066ENSSMAG00000009007pabpc410091.066Scophthalmus_maximus
ENSGMOG00000019025pabpc49991.097ENSSDUG00000012683pabpc410090.439Seriola_dumerili
ENSGMOG00000019025pabpc49991.097ENSSLDG00000013025pabpc410090.439Seriola_lalandi_dorsalis
ENSGMOG00000019025pabpc49973.454ENSSARG00000000310PABPC49972.851Sorex_araneus
ENSGMOG00000019025pabpc49984.748ENSSPUG00000003204PABPC410084.119Sphenodon_punctatus
ENSGMOG00000019025pabpc49991.733ENSSPAG00000009252pabpc410091.223Stegastes_partitus
ENSGMOG00000019025pabpc48843.894ENSSSCG00000036170-9543.894Sus_scrofa
ENSGMOG00000019025pabpc49983.438ENSSSCG00000003660-9982.808Sus_scrofa
ENSGMOG00000019025pabpc49980.568ENSTGUG00000001266PABPC410081.231Taeniopygia_guttata
ENSGMOG00000019025pabpc410089.969ENSTRUG00000005907pabpc410089.969Takifugu_rubripes
ENSGMOG00000019025pabpc410083.204ENSTNIG00000016902pabpc410082.893Tetraodon_nigroviridis
ENSGMOG00000019025pabpc49869.012ENSTBEG00000009035PABPC49968.007Tupaia_belangeri
ENSGMOG00000019025pabpc49862.595ENSTTRG00000014340PABPC49967.559Tursiops_truncatus
ENSGMOG00000019025pabpc49983.438ENSUAMG00000000303PABPC49982.808Ursus_americanus
ENSGMOG00000019025pabpc49882.384ENSUMAG00000019585PABPC49989.220Ursus_maritimus
ENSGMOG00000019025pabpc47868.824ENSVPAG00000010041PABPC47368.824Vicugna_pacos
ENSGMOG00000019025pabpc49983.438ENSVVUG00000005215PABPC49982.808Vulpes_vulpes
ENSGMOG00000019025pabpc49981.575ENSXETG00000010946pabpc410080.945Xenopus_tropicalis
ENSGMOG00000019025pabpc46795.858ENSXETG00000027221-10095.858Xenopus_tropicalis
ENSGMOG00000019025pabpc49987.544ENSXCOG00000013190pabpc49691.038Xiphophorus_couchianus
ENSGMOG00000019025pabpc49990.267ENSXMAG00000019007pabpc410090.267Xiphophorus_maculatus

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