EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSGMOG00000019099 (Gene tree)
Gene ID: -
Gene Symbol: srrm1
Alias: wu:fb34f04|wu:fb38b06|zgc:63802
Full Name: serine/arginine repetitive matrix 1
Gene Type: protein_coding
Species: Gadus_morhua
Status: putative
Strand: Plus strand
Length: 12432 bases
Position: chrGeneScaffold_1441:921656-934087
Accession: ZDB-GENE-040426-2789
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSGMOP00000020560	PWI	PF01480.17	2.7e-30	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSGMOT00000021062	-	2541	-	ENSGMOP00000020560	847 (aa)	-	UPI00023F437A

Gene Model

Click here to download ENSGMOG00000019099's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSGMOG00000019099's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSGMOG00000019099	srrm1	50	75.524	ENSAOCG00000021757	srrm1	69	74.823	Amphiprion_ocellaris
ENSGMOG00000019099	srrm1	66	75.000	ENSATEG00000007659	srrm1	67	75.532	Anabas_testudineus
ENSGMOG00000019099	srrm1	72	75.365	ENSGACG00000007266	srrm1	56	98.601	Gasterosteus_aculeatus
ENSGMOG00000019099	srrm1	70	78.746	ENSLBEG00000013936	srrm1	61	75.352	Labrus_bergylta
ENSGMOG00000019099	srrm1	78	74.952	ENSMAMG00000010305	srrm1	52	79.505	Mastacembelus_armatus
ENSGMOG00000019099	srrm1	78	77.778	ENSSDUG00000012967	srrm1	69	79.787	Seriola_dumerili
ENSGMOG00000019099	srrm1	78	77.586	ENSSLDG00000012771	srrm1	69	79.433	Seriola_lalandi_dorsalis
ENSGMOG00000019099	srrm1	92	70.250	ENSTRUG00000002519	srrm1	67	69.892	Takifugu_rubripes
ENSGMOG00000019099	srrm1	92	70.363	ENSTNIG00000016909	srrm1	66	69.395	Tetraodon_nigroviridis