EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSGMOG00000019123 (Gene tree)
Gene ID: -
Gene Symbol: gfi1b
Alias: si:ch211-231o6.2
Full Name: growth factor independent 1B transcription repressor
Gene Type: protein_coding
Species: Gadus_morhua
Status: putative
Strand: Minus strand
Length: 3461 bases
Position: chrGeneScaffold_4524:181173-184633
Accession: ZDB-GENE-091118-129
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSGMOP00000020567	zf-C2H2	PF00096.26	9.8e-28	1	6
ENSGMOP00000020567	zf-C2H2	PF00096.26	9.8e-28	2	6
ENSGMOP00000020567	zf-C2H2	PF00096.26	9.8e-28	3	6
ENSGMOP00000020567	zf-C2H2	PF00096.26	9.8e-28	4	6
ENSGMOP00000020567	zf-C2H2	PF00096.26	9.8e-28	5	6
ENSGMOP00000020567	zf-C2H2	PF00096.26	9.8e-28	6	6
ENSGMOP00000020567	zf-met	PF12874.7	4.6e-08	1	3
ENSGMOP00000020567	zf-met	PF12874.7	4.6e-08	2	3
ENSGMOP00000020567	zf-met	PF12874.7	4.6e-08	3	3

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSGMOT00000021069	-	801	-	ENSGMOP00000020567	266 (aa)	-	UPI00023F43E0

Gene Model

Click here to download ENSGMOG00000019123's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSGMOG00000019123's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSGMOG00000019123	gfi1b	71	40.000	ENSGMOG00000007875	ZNF319	97	40.000
ENSGMOG00000019123	gfi1b	63	44.444	ENSGMOG00000017526	-	93	44.444
ENSGMOG00000019123	gfi1b	80	39.823	ENSGMOG00000000629	scrt1b	53	39.823
ENSGMOG00000019123	gfi1b	61	37.037	ENSGMOG00000012990	-	99	37.037
ENSGMOG00000019123	gfi1b	79	44.595	ENSGMOG00000006668	znf236	57	44.595
ENSGMOG00000019123	gfi1b	64	46.154	ENSGMOG00000009850	-	99	46.154
ENSGMOG00000019123	gfi1b	61	38.462	ENSGMOG00000020146	-	81	38.462
ENSGMOG00000019123	gfi1b	63	47.170	ENSGMOG00000017518	-	63	47.170
ENSGMOG00000019123	gfi1b	62	35.714	ENSGMOG00000007809	-	98	35.714
ENSGMOG00000019123	gfi1b	66	42.012	ENSGMOG00000004063	ZNF628	99	42.012
ENSGMOG00000019123	gfi1b	74	34.783	ENSGMOG00000012038	prdm5	99	34.783
ENSGMOG00000019123	gfi1b	72	46.715	ENSGMOG00000005588	-	100	46.715
ENSGMOG00000019123	gfi1b	98	32.746	ENSGMOG00000002669	snai2	98	32.746
ENSGMOG00000019123	gfi1b	61	41.558	ENSGMOG00000016613	-	99	41.558
ENSGMOG00000019123	gfi1b	92	42.336	ENSGMOG00000004242	znf319b	95	42.336
ENSGMOG00000019123	gfi1b	77	34.839	ENSGMOG00000016554	znf646	86	34.839
ENSGMOG00000019123	gfi1b	73	39.437	ENSGMOG00000003238	-	99	44.304
ENSGMOG00000019123	gfi1b	70	36.264	ENSGMOG00000002344	zbtb41	64	36.264
ENSGMOG00000019123	gfi1b	62	45.455	ENSGMOG00000020149	si:dkeyp-113d7.1	100	45.455
ENSGMOG00000019123	gfi1b	65	36.957	ENSGMOG00000000494	-	97	36.957
ENSGMOG00000019123	gfi1b	64	35.135	ENSGMOG00000003709	nktr	55	35.762
ENSGMOG00000019123	gfi1b	100	33.824	ENSGMOG00000000127	-	56	33.824
ENSGMOG00000019123	gfi1b	59	30.769	ENSGMOG00000000493	-	97	30.769
ENSGMOG00000019123	gfi1b	71	44.172	ENSGMOG00000009187	ZNF626	80	44.172
ENSGMOG00000019123	gfi1b	81	39.516	ENSGMOG00000007538	znf366	71	36.806
ENSGMOG00000019123	gfi1b	63	38.272	ENSGMOG00000011409	e4f1	54	38.272
ENSGMOG00000019123	gfi1b	63	35.455	ENSGMOG00000016007	-	73	35.455
ENSGMOG00000019123	gfi1b	62	45.098	ENSGMOG00000020024	-	100	45.098
ENSGMOG00000019123	gfi1b	64	46.250	ENSGMOG00000018506	-	100	46.250
ENSGMOG00000019123	gfi1b	65	37.143	ENSGMOG00000017555	znf710b	79	37.143
ENSGMOG00000019123	gfi1b	62	44.000	ENSGMOG00000004315	-	94	44.000

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSGMOG00000019123	gfi1b	100	67.077	ENSAPOG00000001296	gfi1b	100	67.077	Acanthochromis_polyacanthus
ENSGMOG00000019123	gfi1b	89	81.590	ENSACIG00000002190	gfi1b	79	81.590	Amphilophus_citrinellus
ENSGMOG00000019123	gfi1b	100	66.769	ENSAOCG00000021187	gfi1b	100	66.769	Amphiprion_ocellaris
ENSGMOG00000019123	gfi1b	100	69.032	ENSAPEG00000016196	gfi1b	100	69.032	Amphiprion_percula
ENSGMOG00000019123	gfi1b	94	80.934	ENSATEG00000002534	gfi1b	78	80.934	Anabas_testudineus
ENSGMOG00000019123	gfi1b	87	75.966	ENSAPLG00000003373	GFI1B	69	75.966	Anas_platyrhynchos
ENSGMOG00000019123	gfi1b	91	80.658	ENSACLG00000027053	gfi1b	73	80.658	Astatotilapia_calliptera
ENSGMOG00000019123	gfi1b	89	83.613	ENSAMXG00000037544	GFI1B	71	83.613	Astyanax_mexicanus
ENSGMOG00000019123	gfi1b	88	71.967	ENSCAPG00000010404	GFI1B	100	51.944	Cavia_aperea
ENSGMOG00000019123	gfi1b	87	77.253	ENSCPBG00000021186	GFI1B	67	77.253	Chrysemys_picta_bellii
ENSGMOG00000019123	gfi1b	91	81.633	ENSCSEG00000001315	gfi1b	75	81.633	Cynoglossus_semilaevis
ENSGMOG00000019123	gfi1b	100	72.078	ENSCVAG00000017168	gfi1b	100	72.078	Cyprinodon_variegatus
ENSGMOG00000019123	gfi1b	89	82.427	ENSDARG00000079947	gfi1b	99	82.353	Danio_rerio
ENSGMOG00000019123	gfi1b	74	91.379	ENSEEUG00000012609	-	64	91.379	Erinaceus_europaeus
ENSGMOG00000019123	gfi1b	89	84.034	ENSELUG00000016933	gfi1b	70	84.034	Esox_lucius
ENSGMOG00000019123	gfi1b	87	68.462	ENSFALG00000001479	GFI1B	71	68.462	Ficedula_albicollis
ENSGMOG00000019123	gfi1b	100	67.781	ENSFHEG00000015138	gfi1b	100	67.781	Fundulus_heteroclitus
ENSGMOG00000019123	gfi1b	87	76.824	ENSGALG00000003478	GFI1B	68	76.824	Gallus_gallus
ENSGMOG00000019123	gfi1b	88	82.979	ENSGAFG00000003059	gfi1b	100	82.979	Gambusia_affinis
ENSGMOG00000019123	gfi1b	90	83.682	ENSGACG00000018134	gfi1b	100	83.682	Gasterosteus_aculeatus
ENSGMOG00000019123	gfi1b	87	77.253	ENSGAGG00000021327	GFI1B	70	77.253	Gopherus_agassizii
ENSGMOG00000019123	gfi1b	91	80.658	ENSHBUG00000005451	gfi1b	73	80.658	Haplochromis_burtoni
ENSGMOG00000019123	gfi1b	100	66.044	ENSHCOG00000013713	gfi1b	100	66.044	Hippocampus_comes
ENSGMOG00000019123	gfi1b	91	81.070	ENSIPUG00000012769	gfi1b	73	81.070	Ictalurus_punctatus
ENSGMOG00000019123	gfi1b	88	64.130	ENSJJAG00000016355	Gfi1b	74	64.130	Jaculus_jaculus
ENSGMOG00000019123	gfi1b	100	68.847	ENSKMAG00000016047	gfi1b	100	68.847	Kryptolebias_marmoratus
ENSGMOG00000019123	gfi1b	89	86.975	ENSLBEG00000020297	gfi1b	99	70.032	Labrus_bergylta
ENSGMOG00000019123	gfi1b	90	74.074	ENSLACG00000012207	GFI1B	74	74.074	Latimeria_chalumnae
ENSGMOG00000019123	gfi1b	87	83.691	ENSLOCG00000005750	gfi1b	69	83.691	Lepisosteus_oculatus
ENSGMOG00000019123	gfi1b	86	74.678	ENSLAFG00000022367	GFI1B	78	69.884	Loxodonta_africana
ENSGMOG00000019123	gfi1b	91	83.200	ENSMAMG00000003040	gfi1b	100	72.549	Mastacembelus_armatus
ENSGMOG00000019123	gfi1b	91	80.992	ENSMZEG00005015594	gfi1b	73	80.992	Maylandia_zebra
ENSGMOG00000019123	gfi1b	87	77.253	ENSMGAG00000006129	GFI1B	68	77.253	Meleagris_gallopavo
ENSGMOG00000019123	gfi1b	100	72.607	ENSMMOG00000011764	gfi1b	100	72.607	Mola_mola
ENSGMOG00000019123	gfi1b	88	66.171	ENSMODG00000012600	GFI1B	75	66.171	Monodelphis_domestica
ENSGMOG00000019123	gfi1b	97	78.409	ENSMALG00000004034	gfi1b	80	78.409	Monopterus_albus
ENSGMOG00000019123	gfi1b	99	58.485	ENSNGAG00000003333	Gfi1b	100	58.485	Nannospalax_galili
ENSGMOG00000019123	gfi1b	91	80.738	ENSNBRG00000012391	gfi1b	74	80.738	Neolamprologus_brichardi
ENSGMOG00000019123	gfi1b	51	65.185	ENSNBRG00000012376	-	99	65.185	Neolamprologus_brichardi
ENSGMOG00000019123	gfi1b	91	80.738	ENSONIG00000013011	gfi1b	100	88.268	Oreochromis_niloticus
ENSGMOG00000019123	gfi1b	88	76.271	ENSOANG00000014723	GFI1B	73	76.271	Ornithorhynchus_anatinus
ENSGMOG00000019123	gfi1b	100	53.271	ENSORLG00000014390	GFI1B	100	53.271	Oryzias_latipes
ENSGMOG00000019123	gfi1b	90	82.083	ENSORLG00020003719	GFI1B	77	82.083	Oryzias_latipes_hni
ENSGMOG00000019123	gfi1b	100	75.564	ENSORLG00015017142	gfi1b	80	75.564	Oryzias_latipes_hsok
ENSGMOG00000019123	gfi1b	100	66.460	ENSOMEG00000015149	GFI1B	100	66.460	Oryzias_melastigma
ENSGMOG00000019123	gfi1b	88	72.083	ENSOGAG00000008879	GFI1B	72	72.083	Otolemur_garnettii
ENSGMOG00000019123	gfi1b	90	81.667	ENSPKIG00000007643	gfi1b	71	81.667	Paramormyrops_kingsleyae
ENSGMOG00000019123	gfi1b	87	77.253	ENSPSIG00000012112	GFI1B	67	77.253	Pelodiscus_sinensis
ENSGMOG00000019123	gfi1b	99	66.134	ENSPMGG00000006021	gfi1b	99	67.093	Periophthalmus_magnuspinnatus
ENSGMOG00000019123	gfi1b	88	65.428	ENSPCIG00000019724	GFI1B	74	65.428	Phascolarctos_cinereus
ENSGMOG00000019123	gfi1b	91	83.265	ENSPFOG00000003460	gfi1b	73	83.265	Poecilia_formosa
ENSGMOG00000019123	gfi1b	91	83.128	ENSPLAG00000017181	GFI1B	72	83.128	Poecilia_latipinna
ENSGMOG00000019123	gfi1b	91	83.128	ENSPLAG00000021960	GFI1B	74	83.128	Poecilia_latipinna
ENSGMOG00000019123	gfi1b	91	83.128	ENSPMEG00000001556	GFI1B	74	83.128	Poecilia_mexicana
ENSGMOG00000019123	gfi1b	91	83.128	ENSPMEG00000019220	gfi1b	74	83.128	Poecilia_mexicana
ENSGMOG00000019123	gfi1b	91	82.716	ENSPREG00000021718	gfi1b	74	82.716	Poecilia_reticulata
ENSGMOG00000019123	gfi1b	91	80.658	ENSPNYG00000018422	gfi1b	74	80.658	Pundamilia_nyererei
ENSGMOG00000019123	gfi1b	91	80.658	ENSPNAG00000021118	gfi1b	73	80.658	Pygocentrus_nattereri
ENSGMOG00000019123	gfi1b	88	58.364	ENSSHAG00000006462	GFI1B	74	58.364	Sarcophilus_harrisii
ENSGMOG00000019123	gfi1b	71	73.404	ENSSFOG00015011566	gfi1b	90	73.404	Scleropages_formosus
ENSGMOG00000019123	gfi1b	91	82.716	ENSSMAG00000015181	gfi1b	99	68.571	Scophthalmus_maximus
ENSGMOG00000019123	gfi1b	91	83.951	ENSSDUG00000011604	gfi1b	74	83.951	Seriola_dumerili
ENSGMOG00000019123	gfi1b	91	83.539	ENSSLDG00000013823	gfi1b	74	83.539	Seriola_lalandi_dorsalis
ENSGMOG00000019123	gfi1b	99	56.475	ENSSPUG00000016039	GFI1B	81	56.475	Sphenodon_punctatus
ENSGMOG00000019123	gfi1b	100	67.077	ENSSPAG00000022914	gfi1b	100	67.077	Stegastes_partitus
ENSGMOG00000019123	gfi1b	63	93.913	ENSTGUG00000005282	-	100	93.913	Taeniopygia_guttata
ENSGMOG00000019123	gfi1b	64	58.475	ENSTGUG00000015953	-	61	58.475	Taeniopygia_guttata
ENSGMOG00000019123	gfi1b	91	81.481	ENSTRUG00000004525	gfi1b	74	81.481	Takifugu_rubripes
ENSGMOG00000019123	gfi1b	91	80.913	ENSTNIG00000003834	gfi1b	73	80.913	Tetraodon_nigroviridis
ENSGMOG00000019123	gfi1b	100	94.828	ENSTBEG00000014459	GFI1B	83	94.828	Tupaia_belangeri
ENSGMOG00000019123	gfi1b	86	71.861	ENSXETG00000006263	gfi1b	69	71.861	Xenopus_tropicalis
ENSGMOG00000019123	gfi1b	91	83.951	ENSXMAG00000027589	gfi1b	74	83.951	Xiphophorus_maculatus