EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSGMOG00000019304 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Gadus_morhua
Status: putative
Strand: Plus strand
Length: 459333 bases
Position: chrGeneScaffold_579:9943-469275
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSGMOP00000020756	Fox-1_C	PF12414.8	1.1e-42	1	1
ENSGMOP00000020756	RRM_1	PF00076.22	2.8e-17	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSGMOT00000021263	-	999	-	ENSGMOP00000020756	332 (aa)	-	UPI00023F46BC

Gene Model

Click here to download ENSGMOG00000019304's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSGMOG00000019304's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSGMOG00000019304	-	67	65.278	ENSGMOG00000005278	rbfox2	88	66.667
ENSGMOG00000019304	-	86	59.122	ENSGMOG00000005040	rbfox1l	61	74.026

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSGMOG00000019304	-	95	65.823	ENSG00000167281	RBFOX3	99	89.189	Homo_sapiens
ENSGMOG00000019304	-	100	69.519	ENSAPOG00000021630	rbfox3b	86	68.717	Acanthochromis_polyacanthus
ENSGMOG00000019304	-	64	91.667	ENSAPOG00000015658	-	68	91.667	Acanthochromis_polyacanthus
ENSGMOG00000019304	-	99	58.777	ENSAMEG00000014170	RBFOX3	95	57.210	Ailuropoda_melanoleuca
ENSGMOG00000019304	-	78	91.837	ENSACIG00000010817	rbfox3b	100	91.837	Amphilophus_citrinellus
ENSGMOG00000019304	-	63	66.165	ENSACIG00000003768	-	87	53.463	Amphilophus_citrinellus
ENSGMOG00000019304	-	96	68.611	ENSAOCG00000012358	rbfox3b	85	67.778	Amphiprion_ocellaris
ENSGMOG00000019304	-	69	90.196	ENSAOCG00000010786	-	83	90.196	Amphiprion_ocellaris
ENSGMOG00000019304	-	72	88.372	ENSAPEG00000019081	rbfox3b	82	88.372	Amphiprion_percula
ENSGMOG00000019304	-	64	91.667	ENSAPEG00000015891	-	83	91.667	Amphiprion_percula
ENSGMOG00000019304	-	97	66.667	ENSATEG00000019945	rbfox3b	100	65.840	Anabas_testudineus
ENSGMOG00000019304	-	90	69.103	ENSATEG00000023101	-	97	61.918	Anabas_testudineus
ENSGMOG00000019304	-	95	67.722	ENSACAG00000016093	RBFOX3	87	63.260	Anolis_carolinensis
ENSGMOG00000019304	-	95	64.557	ENSANAG00000023457	RBFOX3	100	63.158	Aotus_nancymaae
ENSGMOG00000019304	-	96	62.431	ENSACLG00000025552	-	86	62.707	Astatotilapia_calliptera
ENSGMOG00000019304	-	100	69.892	ENSACLG00000020011	rbfox3b	100	67.877	Astatotilapia_calliptera
ENSGMOG00000019304	-	96	64.266	ENSAMXG00000042841	rbfox3b	89	62.881	Astyanax_mexicanus
ENSGMOG00000019304	-	95	69.279	ENSAMXG00000037246	rbfox3a	95	66.575	Astyanax_mexicanus
ENSGMOG00000019304	-	95	56.646	ENSBTAG00000006280	RBFOX3	100	55.096	Bos_taurus
ENSGMOG00000019304	-	68	89.655	ENSCJAG00000009563	RBFOX3	92	87.234	Callithrix_jacchus
ENSGMOG00000019304	-	87	69.204	ENSCAFG00000005547	RBFOX3	99	66.768	Canis_familiaris
ENSGMOG00000019304	-	99	66.667	ENSCAFG00020008126	RBFOX3	100	63.926	Canis_lupus_dingo
ENSGMOG00000019304	-	99	66.667	ENSCHIG00000009124	RBFOX3	100	64.191	Capra_hircus
ENSGMOG00000019304	-	86	69.097	ENSTSYG00000029617	RBFOX3	100	62.810	Carlito_syrichta
ENSGMOG00000019304	-	99	68.468	ENSCPOG00000021703	RBFOX3	100	63.158	Cavia_porcellus
ENSGMOG00000019304	-	95	64.557	ENSCCAG00000028450	RBFOX3	86	87.234	Cebus_capucinus
ENSGMOG00000019304	-	95	65.823	ENSCATG00000018349	RBFOX3	91	87.234	Cercocebus_atys
ENSGMOG00000019304	-	99	68.580	ENSCLAG00000006449	RBFOX3	100	63.228	Chinchilla_lanigera
ENSGMOG00000019304	-	95	65.823	ENSCSAG00000002355	RBFOX3	100	63.085	Chlorocebus_sabaeus
ENSGMOG00000019304	-	99	69.909	ENSCPBG00000010904	RBFOX3	100	63.989	Chrysemys_picta_bellii
ENSGMOG00000019304	-	99	66.667	ENSCANG00000043120	RBFOX3	100	63.926	Colobus_angolensis_palliatus
ENSGMOG00000019304	-	91	69.508	ENSCGRG00001019476	Rbfox3	100	63.325	Cricetulus_griseus_chok1gshd
ENSGMOG00000019304	-	91	69.508	ENSCGRG00000003268	Rbfox3	100	63.325	Cricetulus_griseus_crigri
ENSGMOG00000019304	-	90	63.545	ENSCSEG00000020606	RBFOX3	65	82.530	Cynoglossus_semilaevis
ENSGMOG00000019304	-	68	88.623	ENSCSEG00000015567	RBFOX3	84	86.538	Cynoglossus_semilaevis
ENSGMOG00000019304	-	96	68.611	ENSCVAG00000006882	rbfox3b	85	67.778	Cyprinodon_variegatus
ENSGMOG00000019304	-	95	68.770	ENSDARG00000010083	rbfox3a	96	66.022	Danio_rerio
ENSGMOG00000019304	-	77	86.957	ENSDARG00000074310	rbfox3b	95	86.957	Danio_rerio
ENSGMOG00000019304	-	77	88.333	ENSDNOG00000039391	RBFOX3	75	68.641	Dasypus_novemcinctus
ENSGMOG00000019304	-	95	62.696	ENSDORG00000005352	Rbfox3	100	64.072	Dipodomys_ordii
ENSGMOG00000019304	-	100	55.641	ENSEBUG00000002129	RBFOX3	83	61.850	Eptatretus_burgeri
ENSGMOG00000019304	-	95	66.038	ENSEASG00005005059	RBFOX3	100	62.740	Equus_asinus_asinus
ENSGMOG00000019304	-	95	66.038	ENSECAG00000023811	RBFOX3	100	62.466	Equus_caballus
ENSGMOG00000019304	-	63	85.333	ENSEEUG00000013974	RBFOX3	76	88.000	Erinaceus_europaeus
ENSGMOG00000019304	-	100	68.449	ENSELUG00000017963	rbfox3b	100	60.160	Esox_lucius
ENSGMOG00000019304	-	99	66.667	ENSFCAG00000002555	RBFOX3	100	63.926	Felis_catus
ENSGMOG00000019304	-	63	86.029	ENSFALG00000012288	RBFOX3	76	66.029	Ficedula_albicollis
ENSGMOG00000019304	-	91	66.340	ENSFDAG00000007489	RBFOX3	100	58.421	Fukomys_damarensis
ENSGMOG00000019304	-	96	60.556	ENSFHEG00000008550	rbfox3b	100	59.722	Fundulus_heteroclitus
ENSGMOG00000019304	-	95	66.456	ENSGALG00000032889	RBFOX3	87	64.088	Gallus_gallus
ENSGMOG00000019304	-	78	91.837	ENSGAFG00000005025	rbfox3b	66	92.135	Gambusia_affinis
ENSGMOG00000019304	-	91	73.026	ENSGACG00000002138	-	100	65.079	Gasterosteus_aculeatus
ENSGMOG00000019304	-	99	70.303	ENSGAGG00000020025	RBFOX3	100	64.266	Gopherus_agassizii
ENSGMOG00000019304	-	99	66.667	ENSGGOG00000012546	RBFOX3	96	87.234	Gorilla_gorilla
ENSGMOG00000019304	-	100	70.081	ENSHBUG00000018099	rbfox3b	86	69.003	Haplochromis_burtoni
ENSGMOG00000019304	-	100	63.564	ENSHBUG00000023098	-	94	63.830	Haplochromis_burtoni
ENSGMOG00000019304	-	91	71.104	ENSHGLG00000008679	RBFOX3	100	62.565	Heterocephalus_glaber_female
ENSGMOG00000019304	-	91	67.532	ENSHGLG00100014739	RBFOX3	100	59.686	Heterocephalus_glaber_male
ENSGMOG00000019304	-	95	62.928	ENSHCOG00000007444	RBFOX3	62	67.119	Hippocampus_comes
ENSGMOG00000019304	-	74	85.106	ENSHCOG00000001863	RBFOX3	92	85.106	Hippocampus_comes
ENSGMOG00000019304	-	96	60.335	ENSIPUG00000021966	rbfox3b	94	72.358	Ictalurus_punctatus
ENSGMOG00000019304	-	91	74.671	ENSIPUG00000012010	rbfox3a	75	89.655	Ictalurus_punctatus
ENSGMOG00000019304	-	58	86.667	ENSSTOG00000026817	RBFOX3	100	88.525	Ictidomys_tridecemlineatus
ENSGMOG00000019304	-	98	65.497	ENSJJAG00000014167	Rbfox3	100	64.191	Jaculus_jaculus
ENSGMOG00000019304	-	96	68.611	ENSKMAG00000006726	rbfox3b	91	74.800	Kryptolebias_marmoratus
ENSGMOG00000019304	-	87	76.552	ENSLBEG00000022508	-	86	66.575	Labrus_bergylta
ENSGMOG00000019304	-	100	69.786	ENSLBEG00000004030	rbfox3b	100	89.796	Labrus_bergylta
ENSGMOG00000019304	-	91	56.704	ENSLACG00000018409	-	97	53.828	Latimeria_chalumnae
ENSGMOG00000019304	-	87	72.759	ENSLOCG00000012267	rbfox3a	95	66.391	Lepisosteus_oculatus
ENSGMOG00000019304	-	99	66.767	ENSLAFG00000016623	RBFOX3	100	63.492	Loxodonta_africana
ENSGMOG00000019304	-	99	64.134	ENSMFAG00000002247	RBFOX3	100	62.983	Macaca_fascicularis
ENSGMOG00000019304	-	95	65.823	ENSMMUG00000023028	RBFOX3	91	86.957	Macaca_mulatta
ENSGMOG00000019304	-	99	63.830	ENSMNEG00000041147	RBFOX3	100	62.810	Macaca_nemestrina
ENSGMOG00000019304	-	95	65.823	ENSMLEG00000025686	RBFOX3	100	63.085	Mandrillus_leucophaeus
ENSGMOG00000019304	-	78	91.837	ENSMAMG00000019810	rbfox3b	100	91.837	Mastacembelus_armatus
ENSGMOG00000019304	-	91	68.371	ENSMAMG00000020600	-	96	60.836	Mastacembelus_armatus
ENSGMOG00000019304	-	100	70.081	ENSMZEG00005000781	rbfox3b	86	69.003	Maylandia_zebra
ENSGMOG00000019304	-	59	57.143	ENSMZEG00005003055	-	54	84.000	Maylandia_zebra
ENSGMOG00000019304	-	99	68.278	ENSMAUG00000013543	Rbfox3	100	63.228	Mesocricetus_auratus
ENSGMOG00000019304	-	100	63.298	ENSMICG00000014898	RBFOX3	100	62.396	Microcebus_murinus
ENSGMOG00000019304	-	91	69.079	ENSMOCG00000015373	Rbfox3	100	63.228	Microtus_ochrogaster
ENSGMOG00000019304	-	96	67.127	ENSMMOG00000020193	rbfox3b	95	60.401	Mola_mola
ENSGMOG00000019304	-	95	66.456	ENSMODG00000002089	RBFOX3	87	63.260	Monodelphis_domestica
ENSGMOG00000019304	-	96	68.421	ENSMALG00000020407	rbfox3b	85	67.778	Monopterus_albus
ENSGMOG00000019304	-	91	74.671	ENSMALG00000018270	-	97	86.538	Monopterus_albus
ENSGMOG00000019304	-	99	66.163	MGP_CAROLIEiJ_G0017487	Rbfox3	93	86.667	Mus_caroli
ENSGMOG00000019304	-	99	67.372	ENSMUSG00000025576	Rbfox3	93	86.667	Mus_musculus
ENSGMOG00000019304	-	99	66.265	MGP_PahariEiJ_G0018614	Rbfox3	93	87.407	Mus_pahari
ENSGMOG00000019304	-	99	65.861	MGP_SPRETEiJ_G0018331	Rbfox3	93	86.667	Mus_spretus
ENSGMOG00000019304	-	98	58.684	ENSMPUG00000012319	RBFOX3	95	58.454	Mustela_putorius_furo
ENSGMOG00000019304	-	99	66.163	ENSNGAG00000018006	Rbfox3	100	63.492	Nannospalax_galili
ENSGMOG00000019304	-	96	68.067	ENSNBRG00000010102	rbfox3b	79	93.333	Neolamprologus_brichardi
ENSGMOG00000019304	-	77	74.468	ENSNBRG00000022885	-	86	88.636	Neolamprologus_brichardi
ENSGMOG00000019304	-	52	88.889	ENSNLEG00000000153	-	62	83.761	Nomascus_leucogenys
ENSGMOG00000019304	-	54	91.489	ENSMEUG00000004218	-	50	91.489	Notamacropus_eugenii
ENSGMOG00000019304	-	62	73.134	ENSOPRG00000016279	-	75	70.115	Ochotona_princeps
ENSGMOG00000019304	-	99	68.580	ENSODEG00000009433	RBFOX3	100	63.228	Octodon_degus
ENSGMOG00000019304	-	96	62.707	ENSONIG00000007282	-	92	62.983	Oreochromis_niloticus
ENSGMOG00000019304	-	100	69.333	ENSONIG00000009549	rbfox3b	100	68.533	Oreochromis_niloticus
ENSGMOG00000019304	-	61	88.136	ENSOCUG00000014217	RBFOX3	55	88.136	Oryctolagus_cuniculus
ENSGMOG00000019304	-	100	69.786	ENSORLG00000000905	rbfox3b	68	68.333	Oryzias_latipes
ENSGMOG00000019304	-	100	69.786	ENSORLG00020018030	rbfox3b	94	60.278	Oryzias_latipes_hni
ENSGMOG00000019304	-	100	65.473	ENSORLG00015009200	rbfox3b	98	89.796	Oryzias_latipes_hsok
ENSGMOG00000019304	-	60	67.829	ENSOMEG00000014677	rbfox3b	80	63.241	Oryzias_melastigma
ENSGMOG00000019304	-	98	60.541	ENSOGAG00000029595	RBFOX3	94	59.701	Otolemur_garnettii
ENSGMOG00000019304	-	64	77.857	ENSOARG00000002908	RBFOX3	80	65.657	Ovis_aries
ENSGMOG00000019304	-	81	65.314	ENSPPAG00000025383	RBFOX3	99	61.012	Pan_paniscus
ENSGMOG00000019304	-	93	64.024	ENSPPRG00000007819	RBFOX3	100	63.260	Panthera_pardus
ENSGMOG00000019304	-	99	66.667	ENSPTRG00000009727	RBFOX3	100	63.926	Pan_troglodytes
ENSGMOG00000019304	-	95	65.823	ENSPANG00000019837	RBFOX3	100	63.085	Papio_anubis
ENSGMOG00000019304	-	100	58.659	ENSPKIG00000022633	-	89	59.218	Paramormyrops_kingsleyae
ENSGMOG00000019304	-	99	71.471	ENSPKIG00000010299	rbfox3a	89	71.825	Paramormyrops_kingsleyae
ENSGMOG00000019304	-	82	64.423	ENSPMGG00000008000	rbfox3b	82	63.782	Periophthalmus_magnuspinnatus
ENSGMOG00000019304	-	99	65.861	ENSPEMG00000010500	Rbfox3	100	63.228	Peromyscus_maniculatus_bairdii
ENSGMOG00000019304	-	71	62.151	ENSPMAG00000008689	rbfox3b	99	64.143	Petromyzon_marinus
ENSGMOG00000019304	-	98	66.261	ENSPCIG00000005766	RBFOX3	100	63.260	Phascolarctos_cinereus
ENSGMOG00000019304	-	100	69.519	ENSPFOG00000018294	rbfox3b	100	60.477	Poecilia_formosa
ENSGMOG00000019304	-	72	93.333	ENSPLAG00000000481	rbfox3b	78	93.333	Poecilia_latipinna
ENSGMOG00000019304	-	96	60.556	ENSPMEG00000022997	rbfox3b	100	59.722	Poecilia_mexicana
ENSGMOG00000019304	-	97	68.132	ENSPREG00000012886	rbfox3b	90	67.590	Poecilia_reticulata
ENSGMOG00000019304	-	99	56.119	ENSPPYG00000008704	RBFOX3	96	53.264	Pongo_abelii
ENSGMOG00000019304	-	95	62.798	ENSPCAG00000001401	RBFOX3	100	61.708	Procavia_capensis
ENSGMOG00000019304	-	97	59.563	ENSPCOG00000012689	RBFOX3	100	61.878	Propithecus_coquereli
ENSGMOG00000019304	-	86	61.246	ENSPVAG00000015243	RBFOX3	100	56.593	Pteropus_vampyrus
ENSGMOG00000019304	-	74	74.468	ENSPNYG00000009079	-	82	88.636	Pundamilia_nyererei
ENSGMOG00000019304	-	68	93.333	ENSPNYG00000010414	rbfox3b	79	93.333	Pundamilia_nyererei
ENSGMOG00000019304	-	99	70.571	ENSPNAG00000002889	rbfox3a	81	83.636	Pygocentrus_nattereri
ENSGMOG00000019304	-	77	78.947	ENSPNAG00000018173	rbfox3b	94	77.049	Pygocentrus_nattereri
ENSGMOG00000019304	-	99	66.265	ENSRNOG00000003386	Rbfox3	100	63.325	Rattus_norvegicus
ENSGMOG00000019304	-	95	65.823	ENSRBIG00000040449	RBFOX3	86	87.234	Rhinopithecus_bieti
ENSGMOG00000019304	-	95	65.823	ENSRROG00000000766	RBFOX3	100	63.085	Rhinopithecus_roxellana
ENSGMOG00000019304	-	99	65.455	ENSSBOG00000031591	RBFOX3	82	87.234	Saimiri_boliviensis_boliviensis
ENSGMOG00000019304	-	99	58.163	ENSSHAG00000016076	RBFOX3	100	54.972	Sarcophilus_harrisii
ENSGMOG00000019304	-	99	69.970	ENSSFOG00015023260	rbfox3a	86	67.905	Scleropages_formosus
ENSGMOG00000019304	-	86	67.361	ENSSFOG00015004716	RBFOX3	89	60.000	Scleropages_formosus
ENSGMOG00000019304	-	96	64.543	ENSSMAG00000019052	-	100	64.266	Scophthalmus_maximus
ENSGMOG00000019304	-	100	65.306	ENSSMAG00000012618	rbfox3b	54	77.273	Scophthalmus_maximus
ENSGMOG00000019304	-	91	68.354	ENSSDUG00000015801	-	84	81.034	Seriola_dumerili
ENSGMOG00000019304	-	96	60.556	ENSSDUG00000023183	rbfox3b	100	59.722	Seriola_dumerili
ENSGMOG00000019304	-	69	88.690	ENSSLDG00000016098	-	85	88.462	Seriola_lalandi_dorsalis
ENSGMOG00000019304	-	96	68.611	ENSSLDG00000000149	rbfox3b	85	67.778	Seriola_lalandi_dorsalis
ENSGMOG00000019304	-	95	68.571	ENSSPUG00000011733	RBFOX3	99	64.444	Sphenodon_punctatus
ENSGMOG00000019304	-	78	91.837	ENSSPAG00000017571	rbfox3b	84	91.837	Stegastes_partitus
ENSGMOG00000019304	-	79	66.540	ENSSPAG00000004898	-	85	57.658	Stegastes_partitus
ENSGMOG00000019304	-	99	67.069	ENSSSCG00000039498	RBFOX3	99	69.486	Sus_scrofa
ENSGMOG00000019304	-	100	66.129	ENSTRUG00000004894	rbfox3b	92	66.129	Takifugu_rubripes
ENSGMOG00000019304	-	100	59.491	ENSTNIG00000011278	rbfox3b	96	58.796	Tetraodon_nigroviridis
ENSGMOG00000019304	-	83	54.874	ENSTBEG00000004296	-	74	54.874	Tupaia_belangeri
ENSGMOG00000019304	-	95	62.857	ENSTTRG00000003676	RBFOX3	100	61.050	Tursiops_truncatus
ENSGMOG00000019304	-	95	66.139	ENSUAMG00000004668	RBFOX3	100	63.361	Ursus_americanus
ENSGMOG00000019304	-	99	66.667	ENSVVUG00000017864	RBFOX3	100	63.085	Vulpes_vulpes
ENSGMOG00000019304	-	72	66.667	ENSXETG00000020236	rbfox3	77	66.667	Xenopus_tropicalis
ENSGMOG00000019304	-	77	91.111	ENSXCOG00000018262	rbfox3b	100	91.111	Xiphophorus_couchianus
ENSGMOG00000019304	-	100	69.519	ENSXMAG00000012939	rbfox3b	100	57.143	Xiphophorus_maculatus