EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSGMOG00000019335 (Gene tree)
Gene ID: -
Gene Symbol: si:ch1073-296i8.2
Alias: -
Full Name: si:ch1073-296i8.2
Gene Type: protein_coding
Species: Gadus_morhua
Status: putative
Strand: Minus strand
Length: 621 bases
Position: chrGeneScaffold_2632:361243-361863
Accession: ZDB-GENE-110411-9
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSGMOP00000020786	RNase_T	PF00929.24	5.1e-08	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSGMOT00000021293	-	531	-	ENSGMOP00000020786	177 (aa)	-	UPI00023F472A

Gene Model

Click here to download ENSGMOG00000019335's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSGMOG00000019335's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSGMOG00000019335	si:ch1073-296i8.2	99	46.067	ENSGMOG00000019565	-	93	46.067

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSGMOG00000019335	si:ch1073-296i8.2	99	57.075	ENSAOCG00000011593	si:ch1073-296i8.2	76	57.075	Amphiprion_ocellaris
ENSGMOG00000019335	si:ch1073-296i8.2	99	56.338	ENSAPEG00000012492	si:ch1073-296i8.2	76	56.338	Amphiprion_percula
ENSGMOG00000019335	si:ch1073-296i8.2	99	44.382	ENSATEG00000021542	si:ch1073-385f13.3	90	44.382	Anabas_testudineus
ENSGMOG00000019335	si:ch1073-296i8.2	99	71.429	ENSATEG00000021547	si:ch1073-296i8.2	69	71.429	Anabas_testudineus
ENSGMOG00000019335	si:ch1073-296i8.2	100	42.697	ENSACLG00000023991	-	54	42.697	Astatotilapia_calliptera
ENSGMOG00000019335	si:ch1073-296i8.2	98	46.591	ENSCVAG00000001533	-	89	46.591	Cyprinodon_variegatus
ENSGMOG00000019335	si:ch1073-296i8.2	99	45.251	ENSDARG00000092584	si:ch1073-385f13.3	73	45.251	Danio_rerio
ENSGMOG00000019335	si:ch1073-296i8.2	98	63.218	ENSDARG00000093773	si:ch1073-296i8.2	74	63.218	Danio_rerio
ENSGMOG00000019335	si:ch1073-296i8.2	99	67.429	ENSFHEG00000018188	si:ch1073-296i8.2	71	67.429	Fundulus_heteroclitus
ENSGMOG00000019335	si:ch1073-296i8.2	98	44.318	ENSFHEG00000018181	-	88	44.318	Fundulus_heteroclitus
ENSGMOG00000019335	si:ch1073-296i8.2	99	68.750	ENSGACG00000007185	si:ch1073-296i8.2	98	68.750	Gasterosteus_aculeatus
ENSGMOG00000019335	si:ch1073-296i8.2	100	44.134	ENSHBUG00000007541	si:ch1073-385f13.3	90	44.134	Haplochromis_burtoni
ENSGMOG00000019335	si:ch1073-296i8.2	98	66.667	ENSHCOG00000008574	si:ch1073-296i8.2	73	66.667	Hippocampus_comes
ENSGMOG00000019335	si:ch1073-296i8.2	99	44.382	ENSKMAG00000015669	-	89	44.382	Kryptolebias_marmoratus
ENSGMOG00000019335	si:ch1073-296i8.2	98	69.540	ENSKMAG00000015660	si:ch1073-296i8.2	78	69.540	Kryptolebias_marmoratus
ENSGMOG00000019335	si:ch1073-296i8.2	91	65.432	ENSLBEG00000019623	si:ch1073-296i8.2	64	65.432	Labrus_bergylta
ENSGMOG00000019335	si:ch1073-296i8.2	99	48.864	ENSLOCG00000014933	-	88	48.864	Lepisosteus_oculatus
ENSGMOG00000019335	si:ch1073-296i8.2	99	45.763	ENSMAMG00000023075	si:ch1073-385f13.3	90	45.763	Mastacembelus_armatus
ENSGMOG00000019335	si:ch1073-296i8.2	76	67.164	ENSMMOG00000018979	si:ch1073-296i8.2	63	67.164	Mola_mola
ENSGMOG00000019335	si:ch1073-296i8.2	99	44.944	ENSMALG00000015952	si:ch1073-385f13.3	90	44.944	Monopterus_albus
ENSGMOG00000019335	si:ch1073-296i8.2	100	44.134	ENSONIG00000012794	si:ch1073-385f13.3	90	44.134	Oreochromis_niloticus
ENSGMOG00000019335	si:ch1073-296i8.2	94	31.472	ENSOANG00000000686	TREX2	81	31.472	Ornithorhynchus_anatinus
ENSGMOG00000019335	si:ch1073-296i8.2	99	64.205	ENSORLG00000023958	si:ch1073-296i8.2	80	64.205	Oryzias_latipes
ENSGMOG00000019335	si:ch1073-296i8.2	98	44.318	ENSORLG00000030645	si:ch1073-385f13.3	79	44.318	Oryzias_latipes
ENSGMOG00000019335	si:ch1073-296i8.2	99	64.205	ENSORLG00020021912	si:ch1073-296i8.2	80	64.205	Oryzias_latipes_hni
ENSGMOG00000019335	si:ch1073-296i8.2	97	45.402	ENSORLG00020021903	-	88	45.402	Oryzias_latipes_hni
ENSGMOG00000019335	si:ch1073-296i8.2	99	63.636	ENSORLG00015015303	si:ch1073-296i8.2	80	63.636	Oryzias_latipes_hsok
ENSGMOG00000019335	si:ch1073-296i8.2	99	40.678	ENSPKIG00000023552	-	82	40.678	Paramormyrops_kingsleyae
ENSGMOG00000019335	si:ch1073-296i8.2	98	44.318	ENSPFOG00000005521	si:ch1073-385f13.3	89	44.318	Poecilia_formosa
ENSGMOG00000019335	si:ch1073-296i8.2	98	44.318	ENSPFOG00000021742	-	92	44.318	Poecilia_formosa
ENSGMOG00000019335	si:ch1073-296i8.2	98	44.318	ENSPMEG00000013096	si:ch1073-385f13.3	88	44.318	Poecilia_mexicana
ENSGMOG00000019335	si:ch1073-296i8.2	98	44.318	ENSPMEG00000013087	si:ch1073-385f13.3	91	44.318	Poecilia_mexicana
ENSGMOG00000019335	si:ch1073-296i8.2	98	38.916	ENSPREG00000013537	-	76	38.916	Poecilia_reticulata
ENSGMOG00000019335	si:ch1073-296i8.2	99	45.143	ENSPNAG00000018956	si:ch1073-385f13.3	93	45.143	Pygocentrus_nattereri
ENSGMOG00000019335	si:ch1073-296i8.2	99	71.429	ENSSMAG00000004874	si:ch1073-296i8.2	68	71.429	Scophthalmus_maximus
ENSGMOG00000019335	si:ch1073-296i8.2	99	46.927	ENSSLDG00000002379	si:ch1073-385f13.3	89	46.927	Seriola_lalandi_dorsalis
ENSGMOG00000019335	si:ch1073-296i8.2	99	65.909	ENSSPAG00000012797	si:ch1073-296i8.2	90	65.909	Stegastes_partitus
ENSGMOG00000019335	si:ch1073-296i8.2	100	64.972	ENSTNIG00000010399	si:ch1073-296i8.2	78	64.972	Tetraodon_nigroviridis
ENSGMOG00000019335	si:ch1073-296i8.2	98	44.886	ENSXMAG00000021869	si:ch1073-385f13.3	88	44.886	Xiphophorus_maculatus