EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSGMOG00000019340 (Gene tree)
Gene ID: -
Gene Symbol: clp1
Alias: fa28a12|wu:fa28a12
Full Name: cleavage and polyadenylation factor I subunit 1
Gene Type: protein_coding
Species: Gadus_morhua
Status: putative
Strand: Minus strand
Length: 2892 bases
Position: chrGeneScaffold_3594:53288-56179
Accession: ZDB-GENE-030131-5306
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSGMOP00000020794	Clp1	PF06807.14	5.3e-30	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSGMOT00000021301	-	1317	-	ENSGMOP00000020794	438 (aa)	-	UPI00023F472E

Gene Model

Click here to download ENSGMOG00000019340's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSGMOG00000019340's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSGMOG00000019340	clp1	100	76.941	ENSG00000172409	CLP1	97	80.144	Homo_sapiens
ENSGMOG00000019340	clp1	100	90.703	ENSAPOG00000008242	clp1	100	90.703	Acanthochromis_polyacanthus
ENSGMOG00000019340	clp1	99	78.009	ENSAMEG00000014551	CLP1	99	78.009	Ailuropoda_melanoleuca
ENSGMOG00000019340	clp1	100	89.116	ENSACIG00000006310	clp1	99	89.116	Amphilophus_citrinellus
ENSGMOG00000019340	clp1	100	90.476	ENSAOCG00000010681	clp1	100	90.476	Amphiprion_ocellaris
ENSGMOG00000019340	clp1	100	90.476	ENSAPEG00000012165	clp1	100	90.476	Amphiprion_percula
ENSGMOG00000019340	clp1	100	89.569	ENSATEG00000012374	clp1	100	89.569	Anabas_testudineus
ENSGMOG00000019340	clp1	95	79.376	ENSACAG00000007139	CLP1	97	79.376	Anolis_carolinensis
ENSGMOG00000019340	clp1	100	77.169	ENSANAG00000034935	CLP1	97	80.144	Aotus_nancymaae
ENSGMOG00000019340	clp1	100	89.342	ENSACLG00000013573	clp1	100	89.342	Astatotilapia_calliptera
ENSGMOG00000019340	clp1	100	89.438	ENSAMXG00000014194	clp1	98	92.399	Astyanax_mexicanus
ENSGMOG00000019340	clp1	95	79.665	ENSBTAG00000006493	CLP1	97	79.665	Bos_taurus
ENSGMOG00000019340	clp1	95	48.095	WBGene00010304	clpf-1	97	48.095	Caenorhabditis_elegans
ENSGMOG00000019340	clp1	100	77.169	ENSCJAG00000008748	CLP1	97	80.144	Callithrix_jacchus
ENSGMOG00000019340	clp1	95	79.665	ENSCAFG00000007815	CLP1	97	79.665	Canis_familiaris
ENSGMOG00000019340	clp1	95	79.665	ENSCAFG00020000903	CLP1	97	79.665	Canis_lupus_dingo
ENSGMOG00000019340	clp1	98	78.089	ENSCHIG00000023497	CLP1	99	78.089	Capra_hircus
ENSGMOG00000019340	clp1	99	78.241	ENSTSYG00000006824	CLP1	99	78.241	Carlito_syrichta
ENSGMOG00000019340	clp1	99	77.650	ENSCAPG00000009703	CLP1	100	77.650	Cavia_aperea
ENSGMOG00000019340	clp1	95	79.904	ENSCPOG00000012554	CLP1	99	79.904	Cavia_porcellus
ENSGMOG00000019340	clp1	98	78.322	ENSCCAG00000031957	CLP1	99	78.322	Cebus_capucinus
ENSGMOG00000019340	clp1	100	76.941	ENSCATG00000044628	CLP1	97	80.144	Cercocebus_atys
ENSGMOG00000019340	clp1	95	79.904	ENSCLAG00000004094	CLP1	97	79.904	Chinchilla_lanigera
ENSGMOG00000019340	clp1	95	80.144	ENSCSAG00000005994	CLP1	97	80.144	Chlorocebus_sabaeus
ENSGMOG00000019340	clp1	95	79.616	ENSCPBG00000016843	CLP1	97	79.616	Chrysemys_picta_bellii
ENSGMOG00000019340	clp1	100	61.416	ENSCING00000003779	-	99	61.416	Ciona_intestinalis
ENSGMOG00000019340	clp1	95	64.337	ENSCSAVG00000003437	-	96	64.337	Ciona_savignyi
ENSGMOG00000019340	clp1	100	77.169	ENSCANG00000034335	CLP1	97	80.144	Colobus_angolensis_palliatus
ENSGMOG00000019340	clp1	95	79.426	ENSCGRG00001002227	CLP1	97	79.426	Cricetulus_griseus_chok1gshd
ENSGMOG00000019340	clp1	95	79.426	ENSCGRG00000004328	CLP1	97	79.426	Cricetulus_griseus_crigri
ENSGMOG00000019340	clp1	100	87.302	ENSCSEG00000008614	clp1	100	87.302	Cynoglossus_semilaevis
ENSGMOG00000019340	clp1	100	87.075	ENSCVAG00000020101	clp1	100	87.075	Cyprinodon_variegatus
ENSGMOG00000019340	clp1	100	89.391	ENSDARG00000063663	clp1	100	89.842	Danio_rerio
ENSGMOG00000019340	clp1	98	77.907	ENSDNOG00000042415	CLP1	90	77.907	Dasypus_novemcinctus
ENSGMOG00000019340	clp1	95	79.665	ENSDORG00000014685	Clp1	97	79.665	Dipodomys_ordii
ENSGMOG00000019340	clp1	95	53.938	FBgn0033842	cbc	98	53.938	Drosophila_melanogaster
ENSGMOG00000019340	clp1	95	79.904	ENSETEG00000003009	CLP1	97	79.904	Echinops_telfairi
ENSGMOG00000019340	clp1	96	68.558	ENSEBUG00000011648	clp1	98	68.558	Eptatretus_burgeri
ENSGMOG00000019340	clp1	98	78.555	ENSEASG00005002093	CLP1	99	78.555	Equus_asinus_asinus
ENSGMOG00000019340	clp1	99	78.241	ENSECAG00000011597	CLP1	99	78.555	Equus_caballus
ENSGMOG00000019340	clp1	95	79.426	ENSEEUG00000012771	CLP1	97	79.426	Erinaceus_europaeus
ENSGMOG00000019340	clp1	95	93.587	ENSELUG00000024048	clp1	100	91.422	Esox_lucius
ENSGMOG00000019340	clp1	99	77.829	ENSFCAG00000006633	CLP1	99	78.089	Felis_catus
ENSGMOG00000019340	clp1	95	79.376	ENSFALG00000011145	CLP1	97	79.376	Ficedula_albicollis
ENSGMOG00000019340	clp1	95	79.904	ENSFDAG00000000234	CLP1	97	79.904	Fukomys_damarensis
ENSGMOG00000019340	clp1	100	87.528	ENSFHEG00000014760	CLP1	100	87.528	Fundulus_heteroclitus
ENSGMOG00000019340	clp1	95	79.616	ENSGALG00000007370	CLP1	97	79.616	Gallus_gallus
ENSGMOG00000019340	clp1	100	87.755	ENSGAFG00000003020	clp1	100	87.755	Gambusia_affinis
ENSGMOG00000019340	clp1	100	90.249	ENSGACG00000017832	clp1	100	90.249	Gasterosteus_aculeatus
ENSGMOG00000019340	clp1	95	79.616	ENSGAGG00000013279	CLP1	97	79.616	Gopherus_agassizii
ENSGMOG00000019340	clp1	100	76.941	ENSGGOG00000023006	CLP1	97	80.144	Gorilla_gorilla
ENSGMOG00000019340	clp1	100	89.569	ENSHBUG00000010436	clp1	100	89.569	Haplochromis_burtoni
ENSGMOG00000019340	clp1	95	79.904	ENSHGLG00000009914	CLP1	97	79.904	Heterocephalus_glaber_female
ENSGMOG00000019340	clp1	95	79.904	ENSHGLG00100006105	CLP1	97	79.904	Heterocephalus_glaber_male
ENSGMOG00000019340	clp1	100	90.930	ENSHCOG00000010072	clp1	100	90.930	Hippocampus_comes
ENSGMOG00000019340	clp1	100	89.238	ENSIPUG00000016238	clp1	99	89.462	Ictalurus_punctatus
ENSGMOG00000019340	clp1	95	79.904	ENSSTOG00000029257	CLP1	97	79.904	Ictidomys_tridecemlineatus
ENSGMOG00000019340	clp1	95	79.426	ENSJJAG00000023691	Clp1	97	79.426	Jaculus_jaculus
ENSGMOG00000019340	clp1	100	88.889	ENSKMAG00000011990	clp1	100	88.889	Kryptolebias_marmoratus
ENSGMOG00000019340	clp1	100	90.703	ENSLBEG00000010201	clp1	100	90.703	Labrus_bergylta
ENSGMOG00000019340	clp1	95	79.665	ENSLACG00000003160	CLP1	97	79.665	Latimeria_chalumnae
ENSGMOG00000019340	clp1	72	88.509	ENSLOCG00000008074	clp1	100	88.889	Lepisosteus_oculatus
ENSGMOG00000019340	clp1	95	79.665	ENSLAFG00000014907	CLP1	97	79.665	Loxodonta_africana
ENSGMOG00000019340	clp1	100	77.169	ENSMFAG00000046074	CLP1	97	80.144	Macaca_fascicularis
ENSGMOG00000019340	clp1	99	78.060	ENSMMUG00000038007	CLP1	99	78.060	Macaca_mulatta
ENSGMOG00000019340	clp1	95	80.144	ENSMNEG00000000259	CLP1	97	80.144	Macaca_nemestrina
ENSGMOG00000019340	clp1	100	76.941	ENSMLEG00000043556	CLP1	97	80.144	Mandrillus_leucophaeus
ENSGMOG00000019340	clp1	100	89.796	ENSMAMG00000002149	clp1	100	89.796	Mastacembelus_armatus
ENSGMOG00000019340	clp1	100	89.342	ENSMZEG00005002850	clp1	100	89.342	Maylandia_zebra
ENSGMOG00000019340	clp1	95	79.616	ENSMGAG00000009643	CLP1	97	79.616	Meleagris_gallopavo
ENSGMOG00000019340	clp1	95	79.137	ENSMAUG00000016261	Clp1	97	79.137	Mesocricetus_auratus
ENSGMOG00000019340	clp1	99	77.294	ENSMICG00000004895	CLP1	97	79.665	Microcebus_murinus
ENSGMOG00000019340	clp1	95	79.665	ENSMOCG00000005498	Clp1	97	79.665	Microtus_ochrogaster
ENSGMOG00000019340	clp1	100	88.889	ENSMMOG00000003229	clp1	100	88.889	Mola_mola
ENSGMOG00000019340	clp1	95	79.616	ENSMODG00000020107	-	97	79.616	Monodelphis_domestica
ENSGMOG00000019340	clp1	95	79.616	ENSMODG00000024148	-	97	79.616	Monodelphis_domestica
ENSGMOG00000019340	clp1	100	88.889	ENSMALG00000014239	clp1	100	88.889	Monopterus_albus
ENSGMOG00000019340	clp1	95	79.426	MGP_CAROLIEiJ_G0023726	Clp1	97	79.426	Mus_caroli
ENSGMOG00000019340	clp1	95	79.426	ENSMUSG00000027079	Clp1	97	79.426	Mus_musculus
ENSGMOG00000019340	clp1	95	79.426	MGP_PahariEiJ_G0025177	Clp1	97	79.426	Mus_pahari
ENSGMOG00000019340	clp1	95	79.426	MGP_SPRETEiJ_G0024646	Clp1	97	79.426	Mus_spretus
ENSGMOG00000019340	clp1	95	79.665	ENSMPUG00000000268	CLP1	97	79.665	Mustela_putorius_furo
ENSGMOG00000019340	clp1	95	80.144	ENSMLUG00000007904	CLP1	97	80.144	Myotis_lucifugus
ENSGMOG00000019340	clp1	95	79.426	ENSNGAG00000006165	Clp1	97	79.426	Nannospalax_galili
ENSGMOG00000019340	clp1	100	89.569	ENSNBRG00000005225	clp1	100	89.569	Neolamprologus_brichardi
ENSGMOG00000019340	clp1	84	73.725	ENSNLEG00000012809	-	99	73.725	Nomascus_leucogenys
ENSGMOG00000019340	clp1	95	79.426	ENSMEUG00000010949	CLP1	97	79.426	Notamacropus_eugenii
ENSGMOG00000019340	clp1	69	80.858	ENSOPRG00000007329	CLP1	100	80.858	Ochotona_princeps
ENSGMOG00000019340	clp1	95	79.904	ENSODEG00000011410	CLP1	97	79.904	Octodon_degus
ENSGMOG00000019340	clp1	100	89.342	ENSONIG00000005089	clp1	100	89.342	Oreochromis_niloticus
ENSGMOG00000019340	clp1	98	78.322	ENSOCUG00000007045	CLP1	99	78.322	Oryctolagus_cuniculus
ENSGMOG00000019340	clp1	100	87.302	ENSORLG00000003647	clp1	100	87.302	Oryzias_latipes
ENSGMOG00000019340	clp1	100	87.075	ENSORLG00020016676	clp1	100	87.075	Oryzias_latipes_hni
ENSGMOG00000019340	clp1	100	87.302	ENSORLG00015019484	clp1	100	87.302	Oryzias_latipes_hsok
ENSGMOG00000019340	clp1	100	87.982	ENSOMEG00000021303	clp1	100	87.982	Oryzias_melastigma
ENSGMOG00000019340	clp1	98	78.089	ENSOGAG00000004508	CLP1	99	78.089	Otolemur_garnettii
ENSGMOG00000019340	clp1	98	77.030	ENSOARG00000010145	CLP1	99	77.030	Ovis_aries
ENSGMOG00000019340	clp1	100	76.941	ENSPPAG00000041519	CLP1	97	80.144	Pan_paniscus
ENSGMOG00000019340	clp1	98	78.089	ENSPPRG00000006135	CLP1	99	78.089	Panthera_pardus
ENSGMOG00000019340	clp1	98	78.089	ENSPTIG00000015866	CLP1	99	78.089	Panthera_tigris_altaica
ENSGMOG00000019340	clp1	95	80.144	ENSPTRG00000047318	CLP1	97	80.144	Pan_troglodytes
ENSGMOG00000019340	clp1	100	76.941	ENSPANG00000017078	CLP1	99	76.941	Papio_anubis
ENSGMOG00000019340	clp1	100	90.498	ENSPKIG00000007697	clp1	100	90.950	Paramormyrops_kingsleyae
ENSGMOG00000019340	clp1	90	77.157	ENSPSIG00000005468	CLP1	97	77.157	Pelodiscus_sinensis
ENSGMOG00000019340	clp1	100	88.662	ENSPMGG00000012171	clp1	100	88.662	Periophthalmus_magnuspinnatus
ENSGMOG00000019340	clp1	95	79.665	ENSPEMG00000011213	-	97	79.665	Peromyscus_maniculatus_bairdii
ENSGMOG00000019340	clp1	95	69.856	ENSPMAG00000006707	clp1	97	69.856	Petromyzon_marinus
ENSGMOG00000019340	clp1	95	79.856	ENSPCIG00000011899	CLP1	97	79.856	Phascolarctos_cinereus
ENSGMOG00000019340	clp1	100	87.982	ENSPFOG00000008169	clp1	100	87.982	Poecilia_formosa
ENSGMOG00000019340	clp1	100	87.982	ENSPLAG00000022388	clp1	100	87.982	Poecilia_latipinna
ENSGMOG00000019340	clp1	100	87.982	ENSPMEG00000021088	clp1	100	87.982	Poecilia_mexicana
ENSGMOG00000019340	clp1	100	88.209	ENSPREG00000017802	clp1	100	88.209	Poecilia_reticulata
ENSGMOG00000019340	clp1	52	78.603	ENSPPYG00000003266	-	100	78.603	Pongo_abelii
ENSGMOG00000019340	clp1	99	78.009	ENSPCOG00000000360	CLP1	99	78.009	Propithecus_coquereli
ENSGMOG00000019340	clp1	95	79.665	ENSPVAG00000016270	CLP1	97	79.665	Pteropus_vampyrus
ENSGMOG00000019340	clp1	100	89.569	ENSPNYG00000017274	clp1	99	89.569	Pundamilia_nyererei
ENSGMOG00000019340	clp1	100	90.337	ENSPNAG00000026460	clp1	100	91.236	Pygocentrus_nattereri
ENSGMOG00000019340	clp1	95	79.426	ENSRNOG00000007416	Clp1	97	79.426	Rattus_norvegicus
ENSGMOG00000019340	clp1	95	80.144	ENSRBIG00000018191	CLP1	97	80.144	Rhinopithecus_bieti
ENSGMOG00000019340	clp1	100	77.169	ENSRROG00000039265	CLP1	97	80.144	Rhinopithecus_roxellana
ENSGMOG00000019340	clp1	95	80.144	ENSSBOG00000032517	-	97	80.144	Saimiri_boliviensis_boliviensis
ENSGMOG00000019340	clp1	94	64.477	ENSSBOG00000010558	-	93	64.477	Saimiri_boliviensis_boliviensis
ENSGMOG00000019340	clp1	95	79.665	ENSSHAG00000015695	CLP1	97	79.665	Sarcophilus_harrisii
ENSGMOG00000019340	clp1	100	88.000	ENSSFOG00015000628	clp1	100	88.667	Scleropages_formosus
ENSGMOG00000019340	clp1	100	89.796	ENSSMAG00000019423	clp1	99	89.796	Scophthalmus_maximus
ENSGMOG00000019340	clp1	100	90.476	ENSSDUG00000014495	clp1	100	90.476	Seriola_dumerili
ENSGMOG00000019340	clp1	100	90.249	ENSSLDG00000000937	clp1	100	90.249	Seriola_lalandi_dorsalis
ENSGMOG00000019340	clp1	52	78.509	ENSSARG00000002459	CLP1	100	78.509	Sorex_araneus
ENSGMOG00000019340	clp1	95	78.897	ENSSPUG00000016811	CLP1	97	78.897	Sphenodon_punctatus
ENSGMOG00000019340	clp1	100	90.249	ENSSPAG00000016052	clp1	100	90.249	Stegastes_partitus
ENSGMOG00000019340	clp1	95	79.665	ENSSSCG00000031442	CLP1	97	79.665	Sus_scrofa
ENSGMOG00000019340	clp1	95	79.376	ENSTGUG00000007002	CLP1	97	79.376	Taeniopygia_guttata
ENSGMOG00000019340	clp1	100	87.528	ENSTRUG00000012602	clp1	100	87.528	Takifugu_rubripes
ENSGMOG00000019340	clp1	100	85.941	ENSTNIG00000013125	clp1	100	85.941	Tetraodon_nigroviridis
ENSGMOG00000019340	clp1	95	79.137	ENSTBEG00000009975	CLP1	97	79.137	Tupaia_belangeri
ENSGMOG00000019340	clp1	95	79.426	ENSTTRG00000002096	CLP1	97	79.426	Tursiops_truncatus
ENSGMOG00000019340	clp1	95	79.665	ENSUAMG00000011388	CLP1	97	79.665	Ursus_americanus
ENSGMOG00000019340	clp1	95	79.665	ENSUMAG00000018317	CLP1	97	79.665	Ursus_maritimus
ENSGMOG00000019340	clp1	100	76.941	ENSVVUG00000017138	CLP1	99	76.941	Vulpes_vulpes
ENSGMOG00000019340	clp1	98	71.526	ENSXETG00000007088	clp1	99	71.754	Xenopus_tropicalis
ENSGMOG00000019340	clp1	100	87.982	ENSXCOG00000002287	clp1	100	87.982	Xiphophorus_couchianus
ENSGMOG00000019340	clp1	100	87.982	ENSXMAG00000009783	clp1	100	87.982	Xiphophorus_maculatus